Silkworm Genome Informatics Database

Gene

KWMTBOMO03391

Pre Gene Modal

BGIBMGA006492

Annotation

PREDICTED:_zinc_finger_and_BTB_domain-containing_protein_49_[Bombyx_mori]

Location

Bomo_Chr6(+):6881572-6911952 View in EpiBrowser

Transcription factor

ZBTB

Location in the cell

Nuclear Reliability : 3.94

CDS

ATGGACCAGCAATTCTGCTTGCGCTGGAACAACCACCCTAACAATCTGACCGATGTGCTTGCGAGTCTTCTGCAAAGAGAGGCTCTCTGTGATGTCACTCTCGCTTGTGATGGAGAGACAGTCAAGGCACACCAGACAATATTATCAGCATGCTCACCATATTTTGAAAGCATATTCCTGCAAAATTCGCATCCACATCCCATTATATTCCTTAAAGATGTACGATTTGCAGAGATGAAATCGTTACTGGATTTTATGTATAAGGGGGAAGTAAATGTTGGCCAAAATATGCTACCAATGTTCCTAAAAACTGCAGAAAGTTTACAAGTTAGAGGTTTGACAGAGAACAATACATTGAATCCGAAGTCGGAAGAGCGATCGACGCCAGTGGTGGGCGCGGAGAACCTATCCCGCGCGGAGTTCGCGACGCCCCCCGCCGCGCACTGCGGTCCCCCCGTCGGACCCGCCCCGCCCCCCGCGCACCCCGCACACGCCCAGCACCCCTCCCATCCCGCACAACACGTGCCGCTCGAGAAGAGGCGCAGGAAGAACTCCACTCTACCCAGAGACGATATCGACAACAATCTCTACCGCCATTATGACGTTCCGGTGAAGAGCGGGAAATGTTCCACGGGGTCTGGCTCGGAGCCGTCCACCCCGCCGCCCGCGCACACCCCGCACGGCGCACAGCGGCTCGGCACGAGGTCGCCGCTCGTCAAGCAGGAGCCGGACTCCCCCTACATGCCGCATGTGCCGCACCCGTCGCCCTTCGAGCAACAACACCTGCAGAACATCGGAGTTACTGACATGGCATCGATATTGTCCCAGCCACCGATCAATAACGATTGCAATGAAAGTGAACCATCGCTGCCGCCGCACCCAGACCAGACGGACACCATTGACGCCCGCCACCAGGCGCACGTGTCGGGTCCGCACGGCCCACAGTACTCGTACCACAGCATGTTCGTCGCGGCCGCCGAGAGCACCGCGCTGTGGCGCTGCAAGTCGTGCGGCAAAGAGGTGTCCAACCGCTGGCACCACTTCCACTCGCACACCGCCCAGCGCTCGCTGTGCCCCTACTGTCCGGCCACGTACAGCCGCATCGACACCCTACGCTCGCACCTGCGTCTGAAGCACTCCTCGCTGCTGCTCAAACACTAA

Protein

MDQQFCLRWNNHPNNLTDVLASLLQREALCDVTLACDGETVKAHQTILSACSPYFESIFLQNSHPHPIIFLKDVRFAEMKSLLDFMYKGEVNVGQNMLPMFLKTAESLQVRGLTENNTLNPKSEERSTPVVGAENLSRAEFATPPAAHCGPPVGPAPPPAHPAHAQHPSHPAQHVPLEKRRRKNSTLPRDDIDNNLYRHYDVPVKSGKCSTGSGSEPSTPPPAHTPHGAQRLGTRSPLVKQEPDSPYMPHVPHPSPFEQQHLQNIGVTDMASILSQPPINNDCNESEPSLPPHPDQTDTIDARHQAHVSGPHGPQYSYHSMFVAAAESTALWRCKSCGKEVSNRWHHFHSHTAQRSLCPYCPATYSRIDTLRSHLRLKHSSLLLKH

Uniprot

A0A2A4JS17 A0A2H1V817 A0A212EM90 A0A194Q3K8 A0A0N0PCI4 H9CWF4 + More
H9CWF2 H9CWF3 A0A1Y1NDE6 A0A1Y1NDC4 A0A1B1LVG2 D8L7V5

Pubmed

22118469 26354079 18362917 19820115 28004739

EMBL

NWSH01000787 PCG74200.1 ODYU01000911 SOQ36384.1 AGBW02013864 OWR42605.1 + More
KQ459551 KPI99943.1 KQ460544 KPJ14094.1 JQ409472 AFD01648.1 JQ409470 AFD01646.1 JQ409471 KQ971312 AFD01647.1 KYB29190.1 GEZM01005821 GEZM01005820 JAV95891.1 GEZM01005819 GEZM01005818 JAV95893.1 KU535586 ANS57232.1 FN429764 CAZ68905.1

Proteomes

UP000218220 UP000007151 UP000053268 UP000053240 UP000007266

Pfam

PF00651 BTB + More
PF00096 zf-C2H2

Interpro

IPR013087   Znf_C2H2_type        + More
IPR011333   SKP1/BTB/POZ_sf
IPR000210   BTB/POZ_dom
IPR003656   Znf_BED
IPR036236   Znf_C2H2_sf

SUPFAM

SSF54695 SSF54695 + More
SSF57667 SSF57667

ProteinModelPortal

A0A2A4JS17 A0A2H1V817 A0A212EM90 A0A194Q3K8 A0A0N0PCI4 H9CWF4 + More
H9CWF2 H9CWF3 A0A1Y1NDE6 A0A1Y1NDC4 A0A1B1LVG2 D8L7V5

PDB

4HXI E-value=1.27471e-08, Score=142

KEGG

101743086 no KO assigned | (RefSeq) zinc finger and BTB domain-containing protein 49

GO

GO:0003677 GO:0003676 GO:0005515 GO:0046872 GO:0003700 GO:0005634 GO:0000287 GO:0003723 GO:0006270 GO:0042555 GO:0048384

Length:

386

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00161

Exp number, first 60 AAs:

0.00057

Total prob of N-in:

0.01815

outside

1 - 386

Pi

224.906619

Theta

189.253453

Tajima's D

0.425228

CLR

0.059693

CSRT

0.495925203739813

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics