SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO03386
Pre Gene Modal
BGIBMGA006383
Annotation
PREDICTED:_IQ_and_ubiquitin-like_domain-containing_protein_[Amyelois_transitella]
Location in the cell
Nuclear   Reliability : 3.113
 

Sequence

CDS
ATGGACGCGAAAAGTACTATAGGCATCGCACCGGACTCCGACTGTGTAAAAGGAGTGGTTGCATGTCAATGCGAACTAGGTCGAGAAAAGCTACTGACGGCTCCACCTTACAATCGAGTGTCCTCGCCTCAAGATGAGAACAAGTCGCGGTACTCTACTGCACCTTGCGCTCGGGATATCGACCAAAACAAGTGTCCTATTAGCCACGTTCTTATCACATTTAAATCGCCATTGCATCCAAACGAAGTGTTCAATAAAGTGTTCCCCGCCAATACTGCAATTAAATATGTCAAAAAGAAACTTGCCAAATTGCTAGGCCTGTCAAATAATAATATACTTTTAACCAAAAATAGGACTGTATTGAAGGACTCAAGCCTCGTATCAGATTTGAAAACTGATGTACTCGGTAATCTTGTTATTGATGTCTTCACCAAAGATTCCGAAGAATTTTCTTTATCATCCATACCAAAAGAATCGTACGTCCATGATCTTCTTCATGCAGTTATGCCAAAAAAGAAAGCAATGCCTTTTATTGCAATAAAATTTAACATTCGTAATCAAAACGGGATATTCACTCGCTCATACCATTCTATCATGAAAATTCACGAGGTGAAAAAGAATTTAGCTGGTCTGTTTGATACTGCACATGACAATTTAGTTCTGTTAAGAAGAGAGCAACCACTTCAAGACCGAATGGCACTTTTAGATCTTGATTATGATAAATATGGTATCGCCGAAGTTGAACTGTTAACAAAAAATAATGAAAAACTACGTTTAGAAAAATTATACAAAGAGTTGCCAATCAATGATGTACTAAGTGTGATGGTACCTTTTGGTAATACTATAAAGCAAATTAACGTGGAAATATTTACAGAGCTTATTGAGAAACCATATTTAGGGGGCTACAGAAATATATTTACTGGAATCGAGTACCATCATGCATATACGCAAACGCCACAAAAACCAGAAAAGTTACCGCCTGAAAAAAAAAACTGTAGAGATACACAAACGGCAGAAGAACGGGAAAAAATATACGATACGGATTATAGTCGAGCAACTCAAATGAATTGTGTTAAAGCATACATCCCGAGTGTGAATGATAAGATAATAACCCCGAAACCATACGAGACTTTTGAAGAAATGAAACGACGTTTGAATCAGGACCATTACGCTTCGATTATTCAAAGAGCATTTAAGCACTACCAGTTTCGGATCAAAGTGGAAAGATGGCTAAAAGAATGCAGAGATAGAATAAACAGAATGCGCGAACAAGACCAAAAAGAACAGGAAGCGATGCAAAGGCGTCTCCAGAGAGATCTTGTGACAAAAACATTCCCGAAAACACGTCAAGATTTTGATCAACTTTATGCTATGGTAGATCGTTGGAAGCACGCCGAAATAGCTAGGATATCACAACTACATTCAAAAGGACCTAAAATTGCTGAATTTACTTTACTGCTTGATAAGGAAGTAGAACTACTGCGTTGTATTGAAGCATACAGAATTAAAATAAAAGAAGACAGTCGAAAAATAAAGGAAGAACGTTTCTTAGAAGAAATATCGAAGCCCGTTGCATGGTATGGACGCAGCGGTAAGCTTATTACTATGGATACTATTGAAATACAAAGAGCTAGGAGATTAAAAGAATTATATAATTCGTTTATACGTGAAGATGCGGAGGTAAAAGAACGACTAGAACTTTTAGTTGATATGAAGTTTGCTTTACAAGAATTCAGTCATCCTTTAGCCGAAGAAATAATAACGCTCTTAGATCAGGAATGCGATCTTCTTGTGCGACGGTATAATGGGTTTCAACTACAGTTCTTACGTCAGAGGGTAGCAGCGAGTATATTACGACTAATCAAAACGTCGGAGCTAAATTTCGGTGTAACTAAATGCAAAGACATCCGCGAATATAGACAAATGGAGCAAAGTAGATTGTACTTTTGCGAACTATGCCATCAAGTCAAGGGCTACGCAGAGTTCCCGTTAAACACAAAGATGAGTGGATTCTTGGTGTGCACATCTTGTTCTTGGAAAGACGTAAACGAACGGAGTTGGGTGGACATGACGCCTTACAAGTTTATTTTACGAGCAGTACAAAGAGAGGAGCGCCGTCGGAAGTGTTGGGGATCCTTAGCCTTTGTATTACAAGAGAAAGATATATTCTTTATTGTTGAAAAATTATGGCATTCACATTCTGCAATTAGCGAATGCAAAGACATAACGGAATTAAGACTGTGTCGTTGGCGTGTGAACGACGATTGGTCTCCATGGAACTGTTTCTTGGTTACGGTGCAAGAGATGAAAGCCCACCTCAAGCTTCAGAATCCTCAAGACGTATACGACGAAGAGCTGGTGCAGAAAGTTGAAACTAAACACAAGTTGGCTAAGGCCAATTTCGAGCAATTAATGTCTGTAAATAAACGTTTCACGGAGAGTGGCGACTGGCAAAGCGTGCGTGCTCCAGCTGTGGCTCGGGTAAATGCAGTCGAACCGATTTGA
Protein
MDAKSTIGIAPDSDCVKGVVACQCELGREKLLTAPPYNRVSSPQDENKSRYSTAPCARDIDQNKCPISHVLITFKSPLHPNEVFNKVFPANTAIKYVKKKLAKLLGLSNNNILLTKNRTVLKDSSLVSDLKTDVLGNLVIDVFTKDSEEFSLSSIPKESYVHDLLHAVMPKKKAMPFIAIKFNIRNQNGIFTRSYHSIMKIHEVKKNLAGLFDTAHDNLVLLRREQPLQDRMALLDLDYDKYGIAEVELLTKNNEKLRLEKLYKELPINDVLSVMVPFGNTIKQINVEIFTELIEKPYLGGYRNIFTGIEYHHAYTQTPQKPEKLPPEKKNCRDTQTAEEREKIYDTDYSRATQMNCVKAYIPSVNDKIITPKPYETFEEMKRRLNQDHYASIIQRAFKHYQFRIKVERWLKECRDRINRMREQDQKEQEAMQRRLQRDLVTKTFPKTRQDFDQLYAMVDRWKHAEIARISQLHSKGPKIAEFTLLLDKEVELLRCIEAYRIKIKEDSRKIKEERFLEEISKPVAWYGRSGKLITMDTIEIQRARRLKELYNSFIREDAEVKERLELLVDMKFALQEFSHPLAEEIITLLDQECDLLVRRYNGFQLQFLRQRVAASILRLIKTSELNFGVTKCKDIREYRQMEQSRLYFCELCHQVKGYAEFPLNTKMSGFLVCTSCSWKDVNERSWVDMTPYKFILRAVQREERRRKCWGSLAFVLQEKDIFFIVEKLWHSHSAISECKDITELRLCRWRVNDDWSPWNCFLVTVQEMKAHLKLQNPQDVYDEELVQKVETKHKLAKANFEQLMSVNKRFTESGDWQSVRAPAVARVNAVEPI

Summary

Similarity
Belongs to the membrane-bound acyltransferase family.
EMBL
BABH01009223    AGBW02013129    OWR43948.1    NWSH01000787    PCG74202.1    ODYU01005740    + More
SOQ46899.1    KQ460544    KPJ14093.1    KQ459551    KPI99944.1    JTDY01001883    KOB72643.1    KB632293    ERL91624.1    APGK01043495    KB741014    ENN75488.1    KQ971312    KYB29216.1    JXUM01066874    JXUM01066875    KQ562420    KXJ75954.1    JXUM01118239    JXUM01118240    KQ566164    KXJ70353.1    GFDL01001934    JAV33111.1    GAKP01019968    JAC38984.1    GDHF01027041    JAI25273.1    GAMC01012814    GAMC01012812    JAB93743.1    CH902617    EDV43347.1    GBXI01005200    JAD09092.1    CP012526    ALC47576.1    CH480815    EDW43177.1    CH954182    EDV54155.1    JRES01000310    KNC32382.1    CH964272    EDW84725.1    AE014297    AAF55988.1    CM000160    EDW97993.1    GEDC01030431    JAS06867.1    OUUW01000013    SPP88146.1    CH479179    EDW24550.1    ATLV01012593    KE524806    KFB36899.1    CM000070    EAL27870.1    ADMH02001373    ETN62722.1    CM004470    OCT89049.1    CM000364    EDX13914.1    JXJN01021768    CH940650    EDW67898.1    AAAB01008987    EAA01052.2    APCN01002028    CH916373    EDV94307.1    AAMC01119312    AAMC01119313    CCAG010015572    AHAT01035613    GEBQ01015116    JAT24861.1    GECU01027380    GECU01006586    JAS80326.1    JAT01121.1    AMQN01011740    KB309065    ELT95613.1    GEBQ01019453    JAT20524.1    GCES01016576    JAR69747.1   
Pfam
PF03062   MBOAT        + More
PF00240   ubiquitin
Interpro
IPR037695   IQUB        + More
IPR029071   Ubiquitin-like_domsf       
IPR000048   IQ_motif_EF-hand-BS       
IPR004299   MBOAT_fam       
IPR000626   Ubiquitin_dom       
SUPFAM
SSF54236   SSF54236       

Ontologies

Topology

Length:
834
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.000690000000000001
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00007
outside
1  -  834
 
 

Population Genetic Test Statistics

Pi
256.36486
Theta
194.246869
Tajima's D
0.607676
CLR
0.032983
CSRT
0.549172541372931
Interpretation
Uncertain
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