SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO03384
Pre Gene Modal
BGIBMGA006490
Annotation
hypothetical_protein_KGM_01493_[Danaus_plexippus]
Location in the cell
PlasmaMembrane   Reliability : 3.395
 

Sequence

CDS
ATGTCTATTTTCGATAGTTTACCAAATGTCGACAATTTCCTATTTTGCATCAGCTTAAAATGGGGAACGGTGCTCATAGCAATTTTGGGTATACTGAGTTGTTCCCTCGGTGTTGTTTTTCACCAACAACACCATTGCCTCGAATTAGAAAGATATGCTGATTATATAAAATACATTAAGTATGTGATAGTCATAGCTGAACTATGGCTTTTCGTTACCAGCATTATACTTTTAATCGGTATTTGCATGAATTTAAAAAAGTTCTAA
Protein
MSIFDSLPNVDNFLFCISLKWGTVLIAILGILSCSLGVVFHQQHHCLELERYADYIKYIKYVIVIAELWLFVTSIILLIGICMNLKKF

Summary

ProteinModelPortal

Ontologies

Topology

Length:
88
Number of predicted TMHs:
2
Exp number of AAs in TMHs:
44.07933
Exp number, first 60 AAs:
21.87145
Total prob of N-in:
0.23347
POSSIBLE N-term signal
sequence
outside
1  -  17
TMhelix
18  -  40
inside
41  -  60
TMhelix
61  -  83
outside
84  -  88
 
 

Population Genetic Test Statistics

Pi
48.481501
Theta
52.668512
Tajima's D
-0.24752
CLR
0.726213
CSRT
0.303234838258087
Interpretation
Uncertain
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