Gene

KWMTBOMO03380

Pre Gene Modal

BGIBMGA010702

Annotation

PREDICTED:_uncharacterized_protein_LOC105842267_[Bombyx_mori]

Location

Bomo_Chr6(+):6543848-6546074      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 4.228

CDS

ATGCCTCGAAAATATATAAGGAAATGTCCCGATCGGAAAGTCTGTACTCAAGAGCAAATTGATAAAGCCAAGCAGTTGATTGGAGAAGGAAAATCGAAACGAGCAGCAGCAGAAATTGTTGGGATCAATGAGAGTACTTTGAGAAAACGTTTAAAACTCAACTCCACTGCAACATCAATGGGGAGATATCAACAAACATTTACACGTGAACAAGAGGAAGAAATTTACAATCATTGCAAATCTAGTGACGAGAGGTTCTACGGTCTTACTTTGAATACACTGAGAAAATTAGTTTACGAATTTGCAGAAGTGAATGAAATAGAGAATAGGTTTGATAAAACAACAAAAATGGCTGGAAAAGACTGGGTCTACGAGTTTATAAAACGACATCCTGATTTAGCTTTAAAGCAAACTACACCTACGAGCATTGCAAGAGCCATTGGTTTTAATCAAGTGCAAGTAAATAGATTTTATACAAACTTGAAAAAGTGTCAAGAAAAATATAACTTCCCTCCAGGTCGAATATATAATATGGACGAGACTGGCATCAGCACAGTGCCAAAAAAGACTCCTAAAGTTATATCACTGAAAGGAAAAAAAAATGTTAATAAAATTGTTTCTGGAGAACGTGGTCAAACTATAACTGCTGTTTGCTGTGTCAGTGCAACTGGAAATTATGTGCCTCCTCCATTTATATTTCCTCGAAAAAGGATGAAGGGTGAACTCATGGATGGAGCTCCAACTGGAAGTATTGGTATGACATCTGATTCGGGATTTATCAACACGGATTTATATTTGGAATGGCTTCATCATTTCAAGGACTACACTTCACCAACTGTCGATAATCCTGTGCTACTGATTATTGACAATCATTCAAGCCATATTAGCTTGCAAGGTACCTTGTATTGCAGACAGCATAACATCATAGTACTTACTTTGCCACCTCACAGCAGTCACAAATTACAACCCTTGGATAGGGCTATTTACAGTCCTCTTAAAAGCCAGTACGCAATTAAAGCTGATAAATGGATGGCACAGCATCCTGGTAGATCTATTAATCAATACCAAGTGACTTTGATTTTTAACAGAGCCTTTCTAAAAATTGCCACTGTGGGTAACGCAGCTTCAGCTTTCAGGGTCACGGGAATATATCCCTTCAACAACGACCTGTTTACAGAAGCAGACTTTGCACCATCTTCAGTTACAGATATGTTTTGTCCAACTTCTGATACTGTCCTTCAAAATCCGTCTACTTCAAGTTCACTTGGCTTGGATCATCATATTGTATCTGTTGCACCTGTTCCACAAGAATTAGTTGCTTCTGCGTCGGCCGATTTATCAGAAACACAATTTGAGATATCTGATGTTTCGACTGTTGCTGAAGTTCATCACCCATCAAGCTCTCCACTACCTAGAAAACCTAACATCGAAACTGATATACAGAAAGCCAATGAACCATCGCATGCGCTTTCTGATCCAATGGACCAAATAGAAGAATTTCAGGAACAACAAATTATTCCGCCTCCCGTTCTCGGTAACATTTCGAATACTCACAAATCTCATATTCCCTTAATCAATATAAGCCCATTGCCAAAGGCAACTCACATTCAGATACGACGCAAAAATGCCAGCAAATCGGAAATAATCACTAATAGTCCGTTTAAAAATATGTTAGAAGAGAAACAAAAAGAAGTCGACCGAAAATCTAAGAAAATAAGAAAACCAAAGATGAACATGGAAACCAAAACTAAGCCAAAGAAGAAAGATAATATTAAGACTAATACTAAAACTAAAGACAATGACAAGAATAAATGTTCAGAACAAGAGTACTACTGTCCGTTGTGTCAAGAAAAGTACGGAGATACGGCTGAAGCGTGGATTAAATGTTCAATTTGTAGCTCTTGGTGGCACGAAGCCTGCACCAGCTGCGAGAGTGGCATATTTACTTGTGATCTATGTGTAGTAAAAGATTGA

Protein

MPRKYIRKCPDRKVCTQEQIDKAKQLIGEGKSKRAAAEIVGINESTLRKRLKLNSTATSMGRYQQTFTREQEEEIYNHCKSSDERFYGLTLNTLRKLVYEFAEVNEIENRFDKTTKMAGKDWVYEFIKRHPDLALKQTTPTSIARAIGFNQVQVNRFYTNLKKCQEKYNFPPGRIYNMDETGISTVPKKTPKVISLKGKKNVNKIVSGERGQTITAVCCVSATGNYVPPPFIFPRKRMKGELMDGAPTGSIGMTSDSGFINTDLYLEWLHHFKDYTSPTVDNPVLLIIDNHSSHISLQGTLYCRQHNIIVLTLPPHSSHKLQPLDRAIYSPLKSQYAIKADKWMAQHPGRSINQYQVTLIFNRAFLKIATVGNAASAFRVTGIYPFNNDLFTEADFAPSSVTDMFCPTSDTVLQNPSTSSSLGLDHHIVSVAPVPQELVASASADLSETQFEISDVSTVAEVHHPSSSPLPRKPNIETDIQKANEPSHALSDPMDQIEEFQEQQIIPPPVLGNISNTHKSHIPLINISPLPKATHIQIRRKNASKSEIITNSPFKNMLEEKQKEVDRKSKKIRKPKMNMETKTKPKKKDNIKTNTKTKDNDKNKCSEQEYYCPLCQEKYGDTAEAWIKCSICSSWWHEACTSCESGIFTCDLCVVKD

Uniprot

H9JME9   H9JAE4   A0A2A4J792   A0A2A4J0W1   J9LG75   A0A2H8TEI8   + More
A0A1Y1MUL7   A0A2S2NVW4   A0A2A4J4D1   T1EQM1   X1X8L4   A0A1Y1M0X3   J9KKA5   A0A1S3D1W0   A0A2H1VTA0   A0A1Y1LR24   A0A194RH46   J9K391   A0A2H1VWF9   X1WN44   A0A1Y1JVK5   A0A1B6L3T1   J9KHJ8   A0A1W4WFM5   T1F601   A0A0J7KEH1   X1WX11   A0A2A4J1E0   A0A2H1VA32   A0A2A4JGA9   H9IUQ1   A0A1W4WAP5   A0A147BB25   A0A2A4K4E0   K7JTE3   A0A1W4XQ86   A0A1Y1MAV5   A0A2A4J258   A0A2A4J1M3   A0A0P6HDU5   A0A2A4JQE1  

Pubmed

19121390    28004739    23254933    26354079    29652888    20075255    + More

EMBL

BABH01016912    BABH01009206    NWSH01002570    PCG67955.1    NWSH01004485    PCG65052.1    + More
ABLF02009840    ABLF02016204    GFXV01000711    MBW12516.1    GEZM01026324    JAV87047.1    GGMR01008742    MBY21361.1    NWSH01003154    PCG66851.1    AMQM01000642    KB096324    ESO06516.1    ABLF02037408    ABLF02037414    GEZM01047343    JAV76877.1    ABLF02006839    ODYU01004314    SOQ44057.1    GEZM01050942    GEZM01050941    GEZM01050940    GEZM01050939    JAV75288.1    KQ460205    KPJ16902.1    ABLF02011245    ODYU01004859    SOQ45169.1    ABLF02017996    GEZM01099403    GEZM01099402    JAV53344.1    GEBQ01021595    JAT18382.1    ABLF02011868    ABLF02011869    AMQM01004377    KB096502    ESO04455.1    LBMM01008804    KMQ88629.1    ABLF02062637    NWSH01003711    PCG65895.1    ODYU01001473    SOQ37710.1    NWSH01001638    PCG70614.1    BABH01000686    GEGO01007436    JAR87968.1    NWSH01000193    PCG78522.1    GEZM01039017    JAV81445.1    NWSH01003844    PCG65768.1    PCG65769.1    GDIQ01020929    JAN73808.1    NWSH01000827    PCG73986.1   

Proteomes

UP000005204    UP000218220    UP000007819    UP000015101    UP000079169    UP000053240    + More
UP000192223    UP000036403    UP000002358   

PRIDE

H9JME9    H9JAE4    H9IUQ1   

Pfam

PF03184   DDE_1        + More
PF05225   HTH_psq
PF03221   HTH_Tnp_Tc5

Interpro

IPR004875   DDE_SF_endonuclease_dom        + More
IPR019786   Zinc_finger_PHD-type_CS       
IPR011011   Znf_FYVE_PHD       
IPR009057   Homeobox-like_sf       
IPR007889   HTH_Psq       
IPR013083   Znf_RING/FYVE/PHD       
IPR036880   Kunitz_BPTI_sf       
IPR006600   HTH_CenpB_DNA-bd_dom       
IPR001965   Znf_PHD       
IPR007110   Ig-like_dom       
IPR019787   Znf_PHD-finger       
IPR003599   Ig_sub       
IPR036179   Ig-like_dom_sf       

SUPFAM

SSF57903   SSF57903        + More
SSF46689   SSF46689       
SSF57362   SSF57362       
SSF48726   SSF48726       

Gene 3D

3.30.40.10    

ProteinModelPortal

H9JME9   H9JAE4   A0A2A4J792   A0A2A4J0W1   J9LG75   A0A2H8TEI8   + More
A0A1Y1MUL7   A0A2S2NVW4   A0A2A4J4D1   T1EQM1   X1X8L4   A0A1Y1M0X3   J9KKA5   A0A1S3D1W0   A0A2H1VTA0   A0A1Y1LR24   A0A194RH46   J9K391   A0A2H1VWF9   X1WN44   A0A1Y1JVK5   A0A1B6L3T1   J9KHJ8   A0A1W4WFM5   T1F601   A0A0J7KEH1   X1WX11   A0A2A4J1E0   A0A2H1VA32   A0A2A4JGA9   H9IUQ1   A0A1W4WAP5   A0A147BB25   A0A2A4K4E0   K7JTE3   A0A1W4XQ86   A0A1Y1MAV5   A0A2A4J258   A0A2A4J1M3   A0A0P6HDU5   A0A2A4JQE1  

KEGG

105842534    no KO assigned | (RefSeq) uncharacterized LOC105842534

GO

GO:0046872   GO:0003676   GO:0003677   GO:0004867   GO:0005634   GO:0016021   GO:0043565   GO:0003700   GO:0000287   GO:0003723   GO:0006270   GO:0042555   GO:0048384  

Subcellular location

Nucleus  

Length:

657

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.31548

Exp number, first 60 AAs:

0

Total prob of N-in:

0.01574

outside

1  -  657

 

 

Pi

209.284541

Theta

138.075749

Tajima's D

0.105619

CLR

29.723273

CSRT

0.399930003499825

Interpretation

Uncertain