Silkworm Genome Informatics Database

Gene

KWMTBOMO03360

Pre Gene Modal

BGIBMGA006483

Annotation

PREDICTED:_uncharacterized_protein_LOC101742071_[Bombyx_mori]

Location

Bomo_Chr6(+):5270358-5274612 View in EpiBrowser

Transcription factor

Homeobox

Location in the cell

Nuclear Reliability : 4.764

CDS

ATGGAATCGTGTCAATACAATTATTCGAATTTGCCTCAGTTCAATCCTAACGAGGATCAGTGGAATCAAGAAATGCGTTCAAGCGACGGTGTGCTGCAAGTGCCTCCGACTTCATCTTACAATCATCAGGAACAGTCTAATCAATTCTCTACGATACCCGTAACGGAAAACTCCATACTCAATAACACACAAGCACAACAACAAGCACACGAGAAGAACAACGCAAATGGCGCAAATGATTTTATACCTCATGATGTACAAGTGAGCAACACGAATGATGCAAATGGGTTGTCAACTACAGGTATATCGATTACTCCTGGTGTTCAAAACGCGACAGGTGCAAGTGCCACTTTCTTCAGCGGGTTTCAGATCAGGTCTGGTTTTGTGGCCAATAATACACCGGTGCCTCAAAGCGTCAATAAGGCGTGTGCTCGAAATTGCTGCAATTCCAATTTCTGTTATCAGCAATTACAAAGGAACGGACTTCAGCCACCGAATCAGCAGCTAACCTTTATCCGCGGCCCAAACGCAGCTGACATATACATAAACAACCATCCAAATGCGCATATGAATATGTTAAGTGTTCCGACATGGCCTAGACAAGGTACTGGTGTTCCACAACTTGTGAATCCATCACAAGCCTGGAACAACATTGCTATAAATAAAATTAATAATGGAGGCACCAAAAAACCAAAGCGTGTGAGAACAGCATTCACTAGCAACCAAATGACGGAGCTAGAGCAAGAATACACTCGCACAAAATACCTGGACCGGGCACGTCGCTTGGAGCTGGCGGAAATCTTACATCTCAACGAAAGGACTATAAAAATATGGTTCCAGAACAGAAGAATGAAAGAGAAAAAGATTTTGACGGAGCACTTAGAAGAGTCTGAAGAAACCAGCACGACTGCTTCTTCGCCAGATTTAGATCTTGAAAATAACGTTAATAATGATGAGCAGTCACTACAGAAGCAGAATGAGGGAGTCCATAGAAAGTTTCCGATACAGTGGCAAATTCAAAAATCAACAGACAGTGAGAAAAGTAAGCCTGTATTTAGTGTTAGAATACGATTGATTTACATCGTACATTATGATGGAGCGCTTGGAACATGA

Protein

MESCQYNYSNLPQFNPNEDQWNQEMRSSDGVLQVPPTSSYNHQEQSNQFSTIPVTENSILNNTQAQQQAHEKNNANGANDFIPHDVQVSNTNDANGLSTTGISITPGVQNATGASATFFSGFQIRSGFVANNTPVPQSVNKACARNCCNSNFCYQQLQRNGLQPPNQQLTFIRGPNAADIYINNHPNAHMNMLSVPTWPRQGTGVPQLVNPSQAWNNIAINKINNGGTKKPKRVRTAFTSNQMTELEQEYTRTKYLDRARRLELAEILHLNERTIKIWFQNRRMKEKKILTEHLEESEETSTTASSPDLDLENNVNNDEQSLQKQNEGVHRKFPIQWQIQKSTDSEKSKPVFSVRIRLIYIVHYDGALGT

Uniprot

C0IMT1

Pubmed

19121390

EMBL

BABH01009132 EU284706 ACA35259.1

Proteomes

UP000005204

PRIDE

C0IMT1

Pfam

PF00046 Homeodomain

Interpro

IPR017970   Homeobox_CS        + More
IPR009057   Homeobox-like_sf
IPR020479   Homeobox_metazoa
IPR001356   Homeobox_dom

SUPFAM

SSF46689 SSF46689

CDD

cd00086 homeodomain

ProteinModelPortal

C0IMT1

PDB

1B72 E-value=4.26226e-13, Score=181

KEGG

101742071 no KO assigned | (RefSeq) uncharacterized LOC101742071

GO

GO:0006355 GO:0043565 GO:0005634 GO:0003677 GO:0008270 GO:0033177 GO:0000287 GO:0003723 GO:0006270 GO:0042555 GO:0048384

Subcellular location

Nucleus

Length:

370

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.03674

Exp number, first 60 AAs:

0

Total prob of N-in:

0.04076

outside

1 - 370

Pi

183.940183

Theta

164.668678

Tajima's D

0.327903

CLR

0.211311

CSRT

0.464176791160442

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics