Gene
KWMTBOMO03357
Pre Gene Modal
BGIBMGA006478
Annotation
special_homeobox_protein_1_[Bombyx_mori]
Transcription factor
Location in the cell
Nuclear Reliability : 4.623
Sequence
CDS
ATGGAATCGTGTAATTACAATTTTTCGAATTTGCCTCAGTTCAATCCTAACAAGATTCAGTGGAATCAAGAAATGAATACAAGCGACGGTGCGCCTCAAGTTCCTTCGACTTCATCTTACAATCATCAGGAACAGTCTGTGATGCCGGAAAACCCCGTTCTCACGAACGCAGAAGCACAACACAAAAACATCAGACTTCAGCCTCCGAATCAGCAGTCATGCTTTATTCGCGGCTCAAACGGAGCTAACGTATACATTAACAACAACACAAATCCATACATGAGTATGTTAAGTGCTCCGACATGGCCAACACAAGGTACAGGTGTTCCGCGACTTGTGAATCCAGCACAAACATGGAACAACATTGCTGTAAACAAAGTTAACAATGGAGGCGCCAAAAAACCAAAGCGTGTGAGAACAGCATTCACTAGCAACCAAATGACGGAACTAGAGCAAGAATACACTCGCACAAAGTACCTAGACCGGGCACGTCGCTTGGAGCTGGCGGAAATCTTACAGCTCAACGAGAGGACCATAAAAATATGGTTCCAGAACAGAAGAATGAAAGAGAAAAAGATTTTGACGGAGCGCTTAGGAGAGTCTGAAGAAACCAGCACGACTGCTTCTTCGCCAGATTTAGGCCCACTTCCAATATATCACAACTATACATTCAATAACCTAAGGTTTACTGAACGAAGTCAACCAGCACAACCTTATTCGATCATGCCGACCTATGGACATCAAACGTTACTTCAGCCTCCGACAGTAAATGGAATGGTTGCCAGTTCAACAGGAGCTCCCGGGACAGGGCTCCAACAACTAAAGTTACAGGATTTTGAGGTTAATCAGCCTATTGGAAATTCAATGCAAGCGAGCACACCGCCCATGCCGAATACCAATAATATGTCCTGGGACTTATCCTGGATTCACAGTATGAACACCCAATATGAATATTGA
Protein
MESCNYNFSNLPQFNPNKIQWNQEMNTSDGAPQVPSTSSYNHQEQSVMPENPVLTNAEAQHKNIRLQPPNQQSCFIRGSNGANVYINNNTNPYMSMLSAPTWPTQGTGVPRLVNPAQTWNNIAVNKVNNGGAKKPKRVRTAFTSNQMTELEQEYTRTKYLDRARRLELAEILQLNERTIKIWFQNRRMKEKKILTERLGESEETSTTASSPDLGPLPIYHNYTFNNLRFTERSQPAQPYSIMPTYGHQTLLQPPTVNGMVASSTGAPGTGLQQLKLQDFEVNQPIGNSMQASTPPMPNTNNMSWDLSWIHSMNTQYEY
Summary
Uniprot
EMBL
Proteomes
Pfam
PF00046 Homeodomain
Interpro
SUPFAM
SSF46689
SSF46689
ProteinModelPortal
PDB
1B72
E-value=1.64765e-13,
Score=183
Ontologies
GO
Topology
Subcellular location
Nucleus
Length:
318
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00155
Exp number, first 60 AAs:
0
Total prob of N-in:
0.04202
outside
1 - 318
Population Genetic Test Statistics
Pi
142.38748
Theta
144.067773
Tajima's D
0.145791
CLR
77.757804
CSRT
0.406379681015949
Interpretation
Uncertain
