Gene

KWMTBOMO03352  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA006477

Annotation

PREDICTED:_prefoldin_subunit_5_[Bombyx_mori]

Location

Bomo_Chr6(+):5055813-5058036      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 2.66

CDS

ATGGCATCCGGTTCAGGCACTCAACAAATCGATTTAAACAAACTACCTTTGCCTCAACTAGCTCAATTGAAACAGCAGTTAGACCAGGAATTGACAGTATTTCATGATTCAATACAAACATTACAAATGGCTAAAAATAAGTTTGGTGAATCAGGAGATGTTCTAGAGAAGATGACGCCTGATATCAAAGGAAAACCGATGCTTGTTCCATTGACTAGTTCAATGTATGTTCCTGGCACAATAGCTGATGTTGAGAATGTCATTATTGACATTGGCACTGGATATTACGCTAAGAAAGACATTGAAAGTGGCAAAGATTACTTCAAGAGAAGAGTAGAATTTGTTACAGAACAAATGGAGAAAATAAGTATGTTAGGTGCAGAGAAATCGAAACTCCGTGAAGCTGTTAATGCATTAGTTGAAATGAAAGTTCAAAACGAACTACAAGCAAAAAAAGCTAACTCTTCATAA

Protein

MASGSGTQQIDLNKLPLPQLAQLKQQLDQELTVFHDSIQTLQMAKNKFGESGDVLEKMTPDIKGKPMLVPLTSSMYVPGTIADVENVIIDIGTGYYAKKDIESGKDYFKRRVEFVTEQMEKISMLGAEKSKLREAVNALVEMKVQNELQAKKANSS

Uniprot

A0A2A4JEH0   A0A2H1W8K1   I4DJT0   A0A194Q4N1   S4PMF0   A0A212F1J5   + More
A0A194R9K2   A0A0L7LBR3   A0A0T6B9C7   A0A1E1WHJ6   E2BZV2   A0A154PC88   A0A195CCY5   A0A1Y1N718   R4WNS9   F4X284   Q17G45   A0A182GFZ7   A0A195DP21   A0A195BUL4   A0A158P385   A0A195EZR4   D6X3H0   A0A0L7R015   E9IHS0   A0A151WZ02   A0A2A3EPP9   V9ILI1   A0A087ZXY1   K7IN97   B0XFI5   A0A1Q3FCE8   A0A0N0BDJ4   A0A0A9Y358   A0A1B0D3Y9   T1E2G7   A0A0P4X1P3   A0A1L8DTW4   A0A1L8DTX6   E2AW60   T1ISQ0   A0A084VZD3   A2IAE4   A0A164ZWH3   W5JQY3   A0A2M3ZIE9   A0A2M4AQE1   A0A2M4C251   A0A182JHY0   E9GVQ8   A0A182XK68   Q7QDJ8   A0A182HJS0   A0A182U2H8   A0A0P5SWR4   T1E8B7   A0A336N3Q3   A0A0J7NNS7   A0A182KWZ5   A0A182K0J0   A0A1W4XHG1   A0A0N8EHE5   A0A0P6AFM9   A0A182V9P7   A0A0P5SUZ5   A0A1B6JXG0   A0A026WHE6   A0A224XYM7   A0A0V0G8A3   A0A023F8F8   J3JYR2   A0A1B6FY93   A0A182MHS7   A0A1Y9IW03   A0A1Y9HEE4   A0A1B6KKA6   A0A182QBK9   B7QE91   A0A0K8R9R5   A0A0P4ZBQ6   U5EH56   A0A0P4VP16   R4G3J1   A0A182Y4I1   A0A182PS53   A0A1B0GGK0   A0A1A9VFW0   A0A182FA64   A0A293M2I5   A0A2P2I3S6   B4MB85  

Pubmed

22651552    26354079    23622113    22118469    26227816    20798317    + More
28004739    23691247    21719571    17510324    26483478    21347285    18362917    19820115    21282665    20075255    25401762    26823975    24330624    24438588    17437641    20920257    23761445    21292972    12364791    14747013    17210077    20966253    24508170    30249741    25474469    22516182    27129103    25244985    17994087   

EMBL

NWSH01001882    PCG69803.1    ODYU01006994    SOQ49343.1    AK401548    BAM18170.1    + More
KQ459551    KPI99969.1    GAIX01003585    JAA88975.1    AGBW02010865    OWR47607.1    KQ460473    KPJ14513.1    JTDY01001806    KOB72834.1    LJIG01002994    KRT83946.1    GDQN01004589    JAT86465.1    GL451689    EFN78788.1    KQ434869    KZC09397.1    KQ977935    KYM98724.1    GEZM01011073    GEZM01011072    JAV93661.1    AK417321    BAN20536.1    GL888568    EGI59419.1    CH477266    EAT45540.1    JXUM01060986    KQ562129    KXJ76625.1    KQ980713    KYN14234.1    KQ976403    KYM92272.1    ADTU01007804    KQ981905    KYN33606.1    KQ971374    EEZ97405.1    KQ414673    KOC64146.1    GL763294    EFZ19878.1    KQ982649    KYQ53118.1    KZ288196    PBC33763.1    JR053440    AEY61930.1    DS232930    EDS26823.1    GFDL01009784    JAV25261.1    KQ435859    KOX70512.1    GBHO01019630    GBHO01019629    GBRD01005756    GDHC01013344    JAG23974.1    JAG23975.1    JAG60065.1    JAQ05285.1    AJVK01023814    GALA01000729    JAA94123.1    GDRN01026818    JAI67670.1    GFDF01004182    JAV09902.1    GFDF01004181    JAV09903.1    GL443246    EFN62339.1    JH431446    ATLV01018745    KE525248    KFB43327.1    EF179458    ABM55464.1    LRGB01000687    KZS16867.1    ADMH02000756    ETN65159.1    GGFM01007531    MBW28282.1    GGFK01009611    MBW42932.1    GGFJ01010090    MBW59231.1    GL732568    EFX76451.1    AAAB01008851    EAA07308.3    APCN01002207    GDIP01139161    JAL64553.1    GAMD01002317    JAA99273.1    UFQT01004415    SSX35683.1    LBMM01002947    KMQ94150.1    GDIQ01026508    JAN68229.1    GDIP01031355    JAM72360.1    GDIP01137961    JAL65753.1    GECU01015880    GECU01003812    JAS91826.1    JAT03895.1    KK107206    QOIP01000001    EZA55450.1    RLU27244.1    GFTR01002744    JAW13682.1    GECL01002509    JAP03615.1    GBBI01001071    JAC17641.1    BT128392    AEE63350.1    GECZ01014604    JAS55165.1    AXCM01000236    GEBQ01028383    JAT11594.1    AXCN02000306    ABJB010701867    DS919778    EEC17163.1    GADI01005982    GEFM01001817    JAA67826.1    JAP73979.1    GDIP01216701    JAJ06701.1    GANO01003173    JAB56698.1    GDKW01002509    JAI54086.1    ACPB03025400    GAHY01002160    JAA75350.1    CCAG010014864    GFWV01010393    MAA35122.1    IACF01003064    LAB68694.1    CH940656    EDW58356.1   

Proteomes

UP000218220    UP000053268    UP000007151    UP000053240    UP000037510    UP000008237    + More
UP000076502    UP000078542    UP000007755    UP000008820    UP000069940    UP000249989    UP000078492    UP000078540    UP000005205    UP000078541    UP000007266    UP000053825    UP000075809    UP000242457    UP000005203    UP000002358    UP000002320    UP000053105    UP000092462    UP000000311    UP000030765    UP000076858    UP000000673    UP000075880    UP000000305    UP000076407    UP000007062    UP000075840    UP000075902    UP000036403    UP000075882    UP000075881    UP000192223    UP000075903    UP000053097    UP000279307    UP000075883    UP000075920    UP000075900    UP000075886    UP000001555    UP000015103    UP000076408    UP000075885    UP000092444    UP000078200    UP000069272    UP000008792   

Pfam

PF02996   Prefoldin        + More
PF00566   RabGAP-TBC

Interpro

IPR004127   Prefoldin_subunit_alpha        + More
IPR011599   PFD_alpha_archaea       
IPR009053   Prefoldin       
IPR000195   Rab-GTPase-TBC_dom       
IPR035969   Rab-GTPase_TBC_sf       

SUPFAM

SSF47923   SSF47923       

Gene 3D

1.10.287.370    

ProteinModelPortal

A0A2A4JEH0   A0A2H1W8K1   I4DJT0   A0A194Q4N1   S4PMF0   A0A212F1J5   + More
A0A194R9K2   A0A0L7LBR3   A0A0T6B9C7   A0A1E1WHJ6   E2BZV2   A0A154PC88   A0A195CCY5   A0A1Y1N718   R4WNS9   F4X284   Q17G45   A0A182GFZ7   A0A195DP21   A0A195BUL4   A0A158P385   A0A195EZR4   D6X3H0   A0A0L7R015   E9IHS0   A0A151WZ02   A0A2A3EPP9   V9ILI1   A0A087ZXY1   K7IN97   B0XFI5   A0A1Q3FCE8   A0A0N0BDJ4   A0A0A9Y358   A0A1B0D3Y9   T1E2G7   A0A0P4X1P3   A0A1L8DTW4   A0A1L8DTX6   E2AW60   T1ISQ0   A0A084VZD3   A2IAE4   A0A164ZWH3   W5JQY3   A0A2M3ZIE9   A0A2M4AQE1   A0A2M4C251   A0A182JHY0   E9GVQ8   A0A182XK68   Q7QDJ8   A0A182HJS0   A0A182U2H8   A0A0P5SWR4   T1E8B7   A0A336N3Q3   A0A0J7NNS7   A0A182KWZ5   A0A182K0J0   A0A1W4XHG1   A0A0N8EHE5   A0A0P6AFM9   A0A182V9P7   A0A0P5SUZ5   A0A1B6JXG0   A0A026WHE6   A0A224XYM7   A0A0V0G8A3   A0A023F8F8   J3JYR2   A0A1B6FY93   A0A182MHS7   A0A1Y9IW03   A0A1Y9HEE4   A0A1B6KKA6   A0A182QBK9   B7QE91   A0A0K8R9R5   A0A0P4ZBQ6   U5EH56   A0A0P4VP16   R4G3J1   A0A182Y4I1   A0A182PS53   A0A1B0GGK0   A0A1A9VFW0   A0A182FA64   A0A293M2I5   A0A2P2I3S6   B4MB85  

PDB

2ZDI     E-value=0.00250817,     Score=91

KEGG

101740246    K04797 prefoldin alpha subunit | (RefSeq) prefoldin subunit 5

GO

GO:0006457   GO:0051082   GO:0016272   GO:0005737   GO:0008270   GO:0033177   GO:0000287   GO:0003723   GO:0006270   GO:0042555   GO:0048384  

Length:

156

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.12756

Exp number, first 60 AAs:

0

Total prob of N-in:

0.15094

outside

1  -  156

 

 

Pi

204.983146

Theta

151.147158

Tajima's D

1.049108

CLR

0

CSRT

0.672066396680166

Interpretation

Uncertain