SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO03345  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA006404
Annotation
PREDICTED:_uncharacterized_protein_LOC106711418_[Papilio_machaon]
Location in the cell
Extracellular   Reliability : 1.735 Nuclear   Reliability : 2.097
 

Sequence

CDS
ATGAGTGAATCGTGTGTAGAAACACCGGAAGCCCCGGCTTGGCTCTCTAAATTAGAGAGTCAAAGAGAAAAACTCAGTAAAGCCCGGCTTGGTCACGACAGTGGGGCCGGTGCTCCTTGCAATTCTTGCGGTCCCACATGCCCAGGGCTAGATTTACATTTTTGGCGTAAAGTATGCCGATCTTGTCACTGCAGTAAAGATGTTCATGATGTGCAAGATGATGACTTATCGGGGTGGGCACAGTTTGAGTTGCTGGGTACAACTAGACCTAAGAAGTCATCATTACCTCTCATTAAAATCCGTGGAGTGACTGACAAACCTGTGAAACTTGATTGGGTACCACCTAATGCATCCACCGAATTGGTGTCAGAGTACATGTCATGTCTGGGTCCATTGGCGCCGGTATCAGGATCCGACGCGGCCCGACGTCGGCGCGCTCAGCTGCGCACTCAGCTGCCGCCCCATGATGTCGCCCCTGACGTTCGCCGTCATGCTTCTGACGAAGAAAAATCTGAACACACAGAATATATATCACGTATAAAAGATCATGTCGTCGGCATGGGCAATGTGGTCCGTGTTGGGCCACTTCAGACTGGAGATGTATTTTCAATTGAAAACAGTAAGACACACGCTCCTAAATCATATGCACTACCTTTGAAAATATCCAATGTATGCAGAGGTGTCAAATACAATATTGTACCTAAAAACGCTTCAGATAAAAAATTAGTTCTGGATACTCAGGGTAATATAGTAAGTAGTGCTGCCAATTTACCAGATTATAAGGCAAGTCCTACAATAAGCAGAGTCGTGAAGGATAAACTTTATGTAATGCGTATAGAATCTGACCGAATTAAGAGTGCCGTTGAGCATGGACCTGTTTATGACAAACTATTTAAAAACCTTCATGAATTAAATATACCCATTAGCAACGATGTGTATCTTGAGCCCATTAAAATATTTCGGGAGGAGTATAATAGTAATCCTCAGTTTAAACAAGAAATGAATGATTTTTGTACGAAAGCACTGGGTGCTCAAATAATGACTGATTTATGGTCATCGCCTAACAATAATGTCATGGGTAACGCGAAAGTTGTGGACAACAGAATACAAAAGGGAACAATATTCGCTCCAAACGGGGAAATATGGGGTTGGAAGCATGAGCCAACCCAACAAGAGCATAGTGGTACATTATGTTCAACAAAAATAAATCCTCAATATTCTACCAGTATGAAACCAATCAATCAGGTTGAGCCTCAACAGACTGCTCCATTGAGAAAATATCAAAGGACTCAGTCGGAAGATGAACTTCCGCCACCTCCACCTCCTAACTACAATACATATCCTGGCGCAATGTCTCCATCTAATACAGATTGGAATAATTCACCGATTGACAATGTTCAAATACCTGATAACGCAGGGTACGAGGTTGAATCACAAATTTCTGATTTCGACGACAATATCACGCCCATCATTGATCAACTTGCTGATTTTACACTTAGCCCCGCCGAAGCAGAATTCAACAGGAAACTGTATAATGAAGGAGTACCTTGCCAACGATGTAATAAGTCTATGTTCGCGGGCGAGGTCGCAGTTAAAGCTGATCGAGCGGGTCAGGAAGCAATTTGGCATCCTCAGTGCTTCACTTGTTGCAAATGCGGGGAGCTACTGGCTGACCTTGTCTACTTTTATCATAAGGGAGAAATTTACTGCGCCAGAGATCTGGCCAATGTTTTAGAAATTCCCCGATGCGCCGGGTGCGACGAGTTGATCTTTACACGTCCATATACCGCAGCAGAAGGCAGAGCTTTCCACGTTCAACATTTCTGTTGTTATCATTGTGATGCTCCACTAGGGGGGAAAAAGTATGTTCCGGATGATAAAACAGGCCTACCAATATGTTTGTCGTGTTACGATCAGTTCTATGCAGAGCGTTGTCGCGCCTGTGGAGGTGTAATTGGGCCTGAACAACAGGGGGTTTCGTGGAGTAACATGCATTGGCATGCCAATTGCTTTATATGTTCCGGTCGAATGTGCGGTAAAAGCTTACTCAGCGGTCGCTTCGTTGTTAAACAAGAAATGCCATTTTGCAGTGTGCCATGTGTACAGAGCAAAATTAAGTAA
Protein
MSESCVETPEAPAWLSKLESQREKLSKARLGHDSGAGAPCNSCGPTCPGLDLHFWRKVCRSCHCSKDVHDVQDDDLSGWAQFELLGTTRPKKSSLPLIKIRGVTDKPVKLDWVPPNASTELVSEYMSCLGPLAPVSGSDAARRRRAQLRTQLPPHDVAPDVRRHASDEEKSEHTEYISRIKDHVVGMGNVVRVGPLQTGDVFSIENSKTHAPKSYALPLKISNVCRGVKYNIVPKNASDKKLVLDTQGNIVSSAANLPDYKASPTISRVVKDKLYVMRIESDRIKSAVEHGPVYDKLFKNLHELNIPISNDVYLEPIKIFREEYNSNPQFKQEMNDFCTKALGAQIMTDLWSSPNNNVMGNAKVVDNRIQKGTIFAPNGEIWGWKHEPTQQEHSGTLCSTKINPQYSTSMKPINQVEPQQTAPLRKYQRTQSEDELPPPPPPNYNTYPGAMSPSNTDWNNSPIDNVQIPDNAGYEVESQISDFDDNITPIIDQLADFTLSPAEAEFNRKLYNEGVPCQRCNKSMFAGEVAVKADRAGQEAIWHPQCFTCCKCGELLADLVYFYHKGEIYCARDLANVLEIPRCAGCDELIFTRPYTAAEGRAFHVQHFCCYHCDAPLGGKKYVPDDKTGLPICLSCYDQFYAERCRACGGVIGPEQQGVSWSNMHWHANCFICSGRMCGKSLLSGRFVVKQEMPFCSVPCVQSKIK

Summary

Pfam
PF00412   LIM        + More
PF06297   PET
Interpro
IPR010442   PET_domain        + More
IPR001781   Znf_LIM       
IPR033724   PET_testin       
PDB
2XQN     E-value=8.6392e-25,     Score=284

Ontologies

Topology

Length:
706
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.000940000000000001
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00013
outside
1  -  706
 
 

Population Genetic Test Statistics

Pi
273.188194
Theta
189.137225
Tajima's D
1.394658
CLR
0.000196
CSRT
0.759062046897655
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
28556443 HASDEEKSEHTEYISR 100.00 7e-07
28556443 VGPLQTGDVFSIENSK 100.00 3e-05
28556443 DLANVLEIPR 100.00 1e-04
28556443 LYNEGVPCQR 100.00 3e-04
Copyright@ 2018-2023    Any Comments and suggestions mail to:zhuzl@cqu.edu.cn   渝ICP备19006517号

渝公网安备 50010602502065号