SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO03335
Pre Gene Modal
BGIBMGA006406
Annotation
seminal_fluid_protein_CSSFP002_[Chilo_suppressalis]
Location in the cell
Extracellular   Reliability : 1.423 Nuclear   Reliability : 1.412
 

Sequence

CDS
ATGGAGTGCGGTGGCGCCAACCAAGAGAACCGTATCGTGGGTGGGATGCCAGCCAGCTCAAACCGGTACCCGTGGATGGCCAGAATCGTTTACGACGGACAGTTCCACTGTGGAGCCTCAGTTCTCACCAAGGAATACGTGTTAACAGCAGCGCATTGTGTCAAGAAATTAAAAAGATCAAAGATCCGGGTGATCCTCGGAGATCACGACCAGACGATCACGTCCGAGAGTGCGGCCATCATGCGGGCGGTCTCTGCGATTGTCCGCCACCGTAGCTTCGACACTGAATCATACAATAACGATATAGCACTACTAAAGTTGAGAAAACCCGTGAATTTCTCTAAAATCATCAAGCCCGTTTGTTTGCCCCCTCCAAGTATTGACCCAGCTGGAAAAGAAGGTGTAGTGGTGGGATGGGGGCGAACATCCGAGGGGGGTCAATTACCCGCAGTTGTACAGGAGGTTCGCGTGCCCATTCTATCACTGAATCAGTGTCGAGGATTGAAATACCGTGCATCTAAGATCACTAACAACATGCTGTGTGCGGGCAGGGCGTCAACCGATTCTTGTCAAGGAGACAGCGGTGGGCCTTTGCTTCTTCAGCAAGGGGACAAGTATCAAATTGTTGGCATAGTGTCATGGGGAGTCGGTTGCGGTCGACCGGGATACCCGGGAGTCTACACGAGGATCACTCGATACCTACCCTGGCTTAAAGCAAACCTTCGAGACACATTAAATTAA
Protein
MECGGANQENRIVGGMPASSNRYPWMARIVYDGQFHCGASVLTKEYVLTAAHCVKKLKRSKIRVILGDHDQTITSESAAIMRAVSAIVRHRSFDTESYNNDIALLKLRKPVNFSKIIKPVCLPPPSIDPAGKEGVVVGWGRTSEGGQLPAVVQEVRVPILSLNQCRGLKYRASKITNNMLCAGRASTDSCQGDSGGPLLLQQGDKYQIVGIVSWGVGCGRPGYPGVYTRITRYLPWLKANLRDTLN

Summary

Similarity
Belongs to the peptidase S1 family.
EMBL
NWSH01007731    PCG62829.1    JN033697    AEW46850.1    KQ460473    KPJ14528.1    + More
AGBW02010347    OWR48670.1    ODYU01004780    SOQ45018.1    AAAB01008898    EAA09162.5    AXCM01002956    CH477445    EAT40775.1    Z49813    CAA89967.1    ADMH02001350    ETN62924.1    ATLV01026864    KE525420    KFB53416.1    DS231872    EDS41412.1    KQ971312    EEZ99214.2    KYB29219.1    GBYB01004789    JAG74556.1    GBYB01004791    JAG74558.1    GBXI01014535    JAC99756.1    GL888593    EGI59207.1    CM000160    EDW98830.2    KQ976403    KYM92218.1    GBYB01004790    JAG74557.1    KQ978801    KYN28214.1    AAZX01018692    GDHF01010114    JAI42200.1    GAMC01004116    JAC02440.1    KQ982649    KYQ53176.1    CM000070    EIM52744.2    BT126633    KB632307    AEE61596.1    ERL91907.1    CH933806    EDW13894.2    AE014297    ACZ95012.2    CH902617    EDV42247.2    OUUW01000007    SPP83250.1    KQ435859    KOX70461.1    DS235816    EEB17567.1    KJ512103    AID60326.1    KZ288360    PBC27021.1    APGK01042919    APGK01042920    KB741010    ENN75592.1    CCAG010008016    FX985325    BAX07338.1    JXJN01024710    KK107304    EZA52933.1    KK853216    KDR09771.1    QOIP01000001    RLU27156.1    KQ981805    KYN35464.1    GL439184    EFN67638.1    KQ414681    KOC63969.1    AXCN02001200    CH940657    EDW63167.1    KRF80937.1    KRF80938.1    CH964272    EDW83948.1    CH479182    EDW33873.1    CM000364    EDX14345.1    CH480848    EDW51144.1    AY061333    AAF56393.1    AAL28881.1    CH954182    EDV53747.1    CH916369    EDV93920.1    ABLF02030881    GGMR01009655    MBY22274.1    CVRI01000064    CRL05275.1    GFXV01001962    MBW13767.1    KQ459551    KPI99986.1    GGMS01010809    MBY80012.1    NEVH01018390    PNF23380.1    GL447689    EFN86142.1    KK855905    PTY24326.1    APCN01005409    AJVK01009807    KQ976842    KYN07908.1    PBC27019.1    KYN35462.1    KYN28211.1    ADTU01007949    EZA52931.1    RLU26344.1    EEB17565.1   
Pfam
PF00089   Trypsin
Interpro
IPR018114   TRYPSIN_HIS        + More
IPR001254   Trypsin_dom       
IPR001314   Peptidase_S1A       
IPR009003   Peptidase_S1_PA       
IPR033116   TRYPSIN_SER       
IPR011360   Compl_C2_B       
IPR012224   Pept_S1A_FX       
SUPFAM
SSF50494   SSF50494       
PDB
3W94     E-value=3.15662e-46,     Score=464

Ontologies

Topology

Length:
246
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.10537
Exp number, first 60 AAs:
0.01281
Total prob of N-in:
0.07562
outside
1  -  246
 
 

Population Genetic Test Statistics

Pi
170.987369
Theta
155.882285
Tajima's D
-1.382566
CLR
0.621304
CSRT
0.0775461226938653
Interpretation
Uncertain
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