Gene

KWMTBOMO03331

Pre Gene Modal

BGIBMGA006469

Annotation

stearoyl-CoA_desaturase_5-like_[Bombyx_mori]

Location

Bomo_Chr6(+):4755397-4756757      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.333 Mitochondrial   Reliability : 1.106

CDS

ATGTACGGCACTAGGCCATACGATAGGAAACTCCAGCCGGTTGAATCCTGGTTTGTGTCGTGTATTAGCTTAGGCGAGGGCTGGCACAATTACCACCACGCCTTCCCGTGGGACTACAAGGCAGCCGAGGAATCTATGCATTTCAACTGCAACGCTACTATAATAAGATTCTTCGAACGAATTGGCTTGGCTTACGACTTGAAGACAGCTTCTCCCGATATGATAAGAAACAGAATTCTGCGCTCCGGTGATGGAACCCACTATGTGCTGGGCAACGACAAAGCCAAGTCAGCGGTCAGCGCTATCGGTCCTCTTCATCCTCTGAACCCAACATACAACAGCACATTAAAATCCCCTGACGCAATCCTCAAACCTGAAGGCCTCCCGTTGTTCCACGAAAACGACGTTCTCATTAGTGATGTTATAAGAGGAAATATTGCTGAATAA

Protein

MYGTRPYDRKLQPVESWFVSCISLGEGWHNYHHAFPWDYKAAEESMHFNCNATIIRFFERIGLAYDLKTASPDMIRNRILRSGDGTHYVLGNDKAKSAVSAIGPLHPLNPTYNSTLKSPDAILKPEGLPLFHENDVLISDVIRGNIAE

Cofactor

Fe cation

Similarity

Belongs to the fatty acid desaturase type 1 family.

Uniprot

H9JAC4   T1RTH0   H9JAC5   T1RTE2   T1RTG1   H9JAC6   + More
A0A2H1WSU7   A0A2H1V292   A0A2A4IZ91   A0A2A4IZE8   A0A0L7L7S7   A0A0L7KSL0   A0A2A4IXV6   A0A194RF26   A0A194Q989   A0A212F4K6   A0A1L8D6C1   A4ZKB9   Q8WSZ4   Q8WQP9   A4ZKB8   A0A182U8R1   A0A182W3M2   A0A182JUS6   A0A182N9T3   Q14TE5   A0A182RDY3   A0A2C9GQA8   A0A182KZD7   Q7PQ92   A0A2C9H8A7   A0A182PQT4   A0A182Q8Q9   A0A182MAQ2   A0A182VM37   A0A182SRM0   A0A182F8Y6   A0A182IMC8   A0A084WT65   A0A182HD15   W5JFU6   B0WAJ3   A0A1S4G6X1   A0A023EUP4   A0A182Y8L2   A0A1J1IZY5   A0A0T6AYP7   A0A1B0CSD3   A0A1B0CZP1   A0A2S2NL87   A0A1B0CB20   A0A1B0CZP4   A0A1B0D038   A0A1W4WVI4   A0A1I8PLR0  

Pubmed

19121390    24500170    26227816    26354079    22118469    17360547    + More
12237399    19257880    20966253    12364791    14747013    17210077    24438588    26483478    20920257    23761445    17510324    24945155    25244985   

EMBL

BABH01009085    JX531671    AGO45856.1    BABH01009086    BABH01009087    BABH01009088    + More
BABH01009089    JX531672    AGO45857.1    JX531673    AGO45858.1    BABH01009091    ODYU01010795    SOQ56118.1    ODYU01000347    SOQ34951.1    NWSH01004663    PCG64796.1    PCG64798.1    JTDY01002472    KOB71346.1    JTDY01006147    KOB66242.1    PCG64797.1    KQ460473    KPJ14531.1    KQ459551    KPI99990.1    AGBW02010347    OWR48667.1    GEYN01000127    JAV02002.1    EF125927    ABO43935.1    AF441220    EU350085    EU350086    AAL35330.1    ACA81689.1    ACA81690.1    AY062023    AAL35746.2    EF125926    ABO43934.1    AB264085    BAE97679.1    APCN01005409    AAAB01008898    EAA09155.6    EGK97208.1    AXCN02001200    AXCM01000318    ATLV01026860    KE525420    KFB53409.1    JXUM01034041    KQ561009    KXJ80056.1    ADMH02001350    ETN62926.1    DS231872    EDS41416.1    GAPW01000906    JAC12692.1    CVRI01000064    CRL05274.1    LJIG01022516    KRT80162.1    AJWK01025912    AJVK01020907    AJVK01020908    GGMR01005330    MBY17949.1    AJWK01004771    AJWK01004772    AJWK01004773    AJWK01004774    AJWK01004775    AJVK01009807   

Proteomes

UP000005204    UP000218220    UP000037510    UP000053240    UP000053268    UP000007151    + More
UP000075902    UP000075920    UP000075881    UP000075884    UP000075900    UP000075840    UP000075882    UP000007062    UP000076407    UP000075885    UP000075886    UP000075883    UP000075903    UP000075901    UP000069272    UP000075880    UP000030765    UP000069940    UP000249989    UP000000673    UP000002320    UP000076408    UP000183832    UP000092461    UP000092462    UP000192223    UP000095300   

PRIDE

H9JAC4    T1RTH0    H9JAC5    T1RTE2    T1RTG1    H9JAC6    + More

Pfam

PF00487   FA_desaturase

Interpro

IPR005804   FA_desaturase_dom        + More
IPR015876   Acyl-CoA_DS       

CDD

cd03505  Delta9-FADS-like

ProteinModelPortal

H9JAC4   T1RTH0   H9JAC5   T1RTE2   T1RTG1   H9JAC6   + More
A0A2H1WSU7   A0A2H1V292   A0A2A4IZ91   A0A2A4IZE8   A0A0L7L7S7   A0A0L7KSL0   A0A2A4IXV6   A0A194RF26   A0A194Q989   A0A212F4K6   A0A1L8D6C1   A4ZKB9   Q8WSZ4   Q8WQP9   A4ZKB8   A0A182U8R1   A0A182W3M2   A0A182JUS6   A0A182N9T3   Q14TE5   A0A182RDY3   A0A2C9GQA8   A0A182KZD7   Q7PQ92   A0A2C9H8A7   A0A182PQT4   A0A182Q8Q9   A0A182MAQ2   A0A182VM37   A0A182SRM0   A0A182F8Y6   A0A182IMC8   A0A084WT65   A0A182HD15   W5JFU6   B0WAJ3   A0A1S4G6X1   A0A023EUP4   A0A182Y8L2   A0A1J1IZY5   A0A0T6AYP7   A0A1B0CSD3   A0A1B0CZP1   A0A2S2NL87   A0A1B0CB20   A0A1B0CZP4   A0A1B0D038   A0A1W4WVI4   A0A1I8PLR0  

PDB

4YMK     E-value=3.18308e-18,     Score=219

KEGG

101739422    K00507 stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1] | (RefSeq) BmorQPVE1; stearoyl-Co

PATHWAY

01040    Biosynthesis of unsaturated fatty acids - Bombyx mori (domestic silkworm)
01100    Metabolic pathways - Bombyx mori (domestic silkworm)
01212    Fatty acid metabolism - Bombyx mori (domestic silkworm)

GO

GO:0016021   GO:0006633   GO:0016717   GO:0006629   GO:0006636   GO:0005506   GO:0005789  

PANTHER

PTHR11351  

Length:

148

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00877999999999998

Exp number, first 60 AAs:

0.00795

Total prob of N-in:

0.47576

outside

1  -  148

 

 

Pi

137.068897

Theta

138.488625

Tajima's D

0.025138

CLR

50.959881

CSRT

0.379631018449078

Interpretation

Uncertain