Gene

KWMTBOMO03330

Pre Gene Modal

BGIBMGA006471

Annotation

stearoyl-CoA_desaturase_5-like_[Bombyx_mori]

Location

Bomo_Chr6(+):4744457-4745094      View in EpiBrowser

Location in the cell

Mitochondrial   Reliability : 1.861

CDS

ATGTATGCAGGGAGCACAGGCGTTACAGTCGGTGCTCATCGACTCTTCACTCATAAATCATTCAAAGCAACACCGCTTCTCAAAGTTTTTCTCCTTTGCCTACAAACCATAGCAGGACAGAATTCGACGTTCATTTGGGTTCGCGATCATCGTCTCCACCACCGCTACTCCGATACCGATGCCGACCCACATAATTCTAAGAGAGGCTTCTTCTTTTGCCACATTGGATGGCTAATGATGAAAAAACATCCATATGTTATTGAATTGGGAAGAAGAATCGATATGAGTGACCTTCAAGCGGATAAAATGATAATGTTCCAGAAAAAGTAA

Protein

MYAGSTGVTVGAHRLFTHKSFKATPLLKVFLLCLQTIAGQNSTFIWVRDHRLHHRYSDTDADPHNSKRGFFFCHIGWLMMKKHPYVIELGRRIDMSDLQADKMIMFQKK

Cofactor

Fe cation
Fe(2+)

Similarity

Belongs to the fatty acid desaturase type 1 family.

Uniprot

T1RTH0   T1RTE2   H9JAC6   T1RTG1   A0A2H1WSU7   A0A194Q989   + More
A0A194RF26   A0A2H1V292   A0A2A4IXV6   A0A1L8D6C1   A0A212F4K6   A0A182JUS5   T1IDC7   A0A182PQT3   A0A0L7KSL0   A0A182W3M1   A0A182RDY4   A0A182U951   A0A182F8Y7   A0A182N9T4   A0A1B6FRL5   E0VW13   A0A182VM37   A0A2C9H8A7   A0A1B6KF34   A0A2C9GQA8   A0A182KZD7   Q7PQ92   A0A182Y8L2   W5JFU6   A0A1B0D038   A0A1B0CZP5   A0A182IMC8   A0A182Q8Q9   A0A084WT65   A0A182MAQ2   T1I088   A0A0T6AYP7   A0A182SRM0   A0A146L0C4   A0A2R7VQY9   A0A1J1IZY5   D6W9N6   A0A096XDB4   Q171V8   A0A336LJV2   A4KWW3   A4ZKB7   H9JAC5   Q8WSZ4   Q8WQP9   A4ZKB8   A0A1B0CZP4   Q14TE5   B0WAJ2   A0A1B0CZP1   T1IDE9   A0A1Y1LII3   A0A1W4WVL1   A0A182PS55   A0A2S2QMZ6   W5JSC3   A0A023EUP4   A0A3M6TZ36   N6UAX5   A0A023ERW8   A0A0F8B2S9   A0A1J1J657   T1PQM9   E2BGQ2   A0A336MAE4   A0A3B4Y3V9   A0A3B4U151   A0A1S4EFC2   Q173B1   A0A0K8S5D1   A0A182IPM3   A0A182TJZ6   A0A023ERW2   A0A1S3D6B4   A0A1S3D7T3   A0A0P6J0V5   A0A0A9XP67   A0A1S4G6X1   A0A2S2QTL0   A0A1S4ECH4   M1FXD6   A0A182R814   T1I119   U5EY18   A0A182T7Z9   A0A2D4KYW2   A0A2S2QIW8   A0A1B0DIJ1   A0A182KWY6   A0A182HJS3   Q7QDJ5   A0A182XK65   A0A182V4X1  

Pubmed

24500170    19121390    26354079    22118469    26227816    20566863    + More
20966253    12364791    14747013    17210077    25244985    20920257    23761445    24438588    26823975    18362917    19820115    24880119    17510324    17360547    12237399    19257880    28004739    24945155    30382153    23537049    25835551    20798317    26999592    25401762   

EMBL

JX531671    AGO45856.1    JX531672    AGO45857.1    BABH01009091    JX531673    + More
AGO45858.1    ODYU01010795    SOQ56118.1    KQ459551    KPI99990.1    KQ460473    KPJ14531.1    ODYU01000347    SOQ34951.1    NWSH01004663    PCG64797.1    GEYN01000127    JAV02002.1    AGBW02010347    OWR48667.1    ACPB03002937    JTDY01006147    KOB66242.1    GECZ01016924    JAS52845.1    DS235816    EEB17569.1    GEBQ01029895    JAT10082.1    APCN01005409    AAAB01008898    EAA09155.6    EGK97208.1    ADMH02001350    ETN62926.1    AJVK01009807    AJVK01020909    AXCN02001200    ATLV01026860    KE525420    KFB53409.1    AXCM01000318    ACPB03011802    LJIG01022516    KRT80162.1    GDHC01018259    JAQ00370.1    KK854022    PTY09558.1    CVRI01000064    CRL05274.1    KQ971312    EEZ98125.1    KF576671    AHH30812.1    CH477445    EAT40778.1    UFQS01006037    UFQT01006037    SSX16909.1    SSX36077.1    EF125923    EF125924    ABO43931.1    ABO43932.1    EF125925    ABO43933.1    BABH01009086    BABH01009087    BABH01009088    BABH01009089    AF441220    EU350085    EU350086    AAL35330.1    ACA81689.1    ACA81690.1    AY062023    AAL35746.2    EF125926    ABO43934.1    AJVK01020908    AB264085    BAE97679.1    DS231872    EDS41415.1    AJVK01020907    GEZM01060888    GEZM01060887    JAV70837.1    GGMS01009319    MBY78522.1    ADMH02000313    ETN67016.1    GAPW01000906    JAC12692.1    RCHS01002593    RMX46715.1    APGK01042247    APGK01042248    APGK01042249    APGK01042250    APGK01042251    KB741002    KB632309    ENN75787.1    ERL92046.1    GAPW01002159    JAC11439.1    KP731998    KQ041834    ALL96430.1    KKF21888.1    CVRI01000074    CRL07879.1    KA650423    AFP65052.1    GL448204    EFN85122.1    UFQT01000797    SSX27312.1    CH477428    EAT41117.1    GBRD01017443    GBRD01017442    JAG48384.1    GAPW01001631    JAC11967.1    GDUN01000309    JAN95610.1    GBHO01040158    GBHO01040157    GBHO01040154    GBHO01021850    JAG03446.1    JAG03447.1    JAG03450.1    JAG21754.1    GGMS01011770    MBY80973.1    JQ693685    AFV15454.1    ACPB03020384    GANO01002241    JAB57630.1    IACL01099204    LAB13896.1    GGMS01008481    MBY77684.1    AJVK01062643    APCN01002208    AAAB01008851    EAA07365.5   

Proteomes

UP000005204    UP000053268    UP000053240    UP000218220    UP000007151    UP000075881    + More
UP000015103    UP000075885    UP000037510    UP000075920    UP000075900    UP000075902    UP000069272    UP000075884    UP000009046    UP000075903    UP000076407    UP000075840    UP000075882    UP000007062    UP000076408    UP000000673    UP000092462    UP000075880    UP000075886    UP000030765    UP000075883    UP000075901    UP000183832    UP000007266    UP000008820    UP000002320    UP000192223    UP000275408    UP000019118    UP000030742    UP000008237    UP000261360    UP000261420    UP000079169   

PRIDE

T1RTH0    T1RTE2    H9JAC6    T1RTG1    H9JAC5   

Pfam

PF00487   FA_desaturase

Interpro

IPR005804   FA_desaturase_dom        + More
IPR015876   Acyl-CoA_DS       
IPR001522   FADS-1_CS       
IPR009160   Acyl-CoA_deSatase_haem/ster-bd       

CDD

cd03505  Delta9-FADS-like

ProteinModelPortal

T1RTH0   T1RTE2   H9JAC6   T1RTG1   A0A2H1WSU7   A0A194Q989   + More
A0A194RF26   A0A2H1V292   A0A2A4IXV6   A0A1L8D6C1   A0A212F4K6   A0A182JUS5   T1IDC7   A0A182PQT3   A0A0L7KSL0   A0A182W3M1   A0A182RDY4   A0A182U951   A0A182F8Y7   A0A182N9T4   A0A1B6FRL5   E0VW13   A0A182VM37   A0A2C9H8A7   A0A1B6KF34   A0A2C9GQA8   A0A182KZD7   Q7PQ92   A0A182Y8L2   W5JFU6   A0A1B0D038   A0A1B0CZP5   A0A182IMC8   A0A182Q8Q9   A0A084WT65   A0A182MAQ2   T1I088   A0A0T6AYP7   A0A182SRM0   A0A146L0C4   A0A2R7VQY9   A0A1J1IZY5   D6W9N6   A0A096XDB4   Q171V8   A0A336LJV2   A4KWW3   A4ZKB7   H9JAC5   Q8WSZ4   Q8WQP9   A4ZKB8   A0A1B0CZP4   Q14TE5   B0WAJ2   A0A1B0CZP1   T1IDE9   A0A1Y1LII3   A0A1W4WVL1   A0A182PS55   A0A2S2QMZ6   W5JSC3   A0A023EUP4   A0A3M6TZ36   N6UAX5   A0A023ERW8   A0A0F8B2S9   A0A1J1J657   T1PQM9   E2BGQ2   A0A336MAE4   A0A3B4Y3V9   A0A3B4U151   A0A1S4EFC2   Q173B1   A0A0K8S5D1   A0A182IPM3   A0A182TJZ6   A0A023ERW2   A0A1S3D6B4   A0A1S3D7T3   A0A0P6J0V5   A0A0A9XP67   A0A1S4G6X1   A0A2S2QTL0   A0A1S4ECH4   M1FXD6   A0A182R814   T1I119   U5EY18   A0A182T7Z9   A0A2D4KYW2   A0A2S2QIW8   A0A1B0DIJ1   A0A182KWY6   A0A182HJS3   Q7QDJ5   A0A182XK65   A0A182V4X1  

PDB

4YMK     E-value=9.42805e-34,     Score=352

KEGG

101739422    K00507 stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1] | (RefSeq) BmorQPVE1; stearoyl-Co

GO

GO:0016717   GO:0016021   GO:0006633   GO:0004768   GO:0006636   GO:0005506   GO:0005789   GO:0006629   GO:0016491   GO:0005576   GO:0005515   GO:0033177   GO:0000287   GO:0003723   GO:0006270   GO:0042555   GO:0048384   GO:0055114  

PANTHER

PTHR11351  

Length:

109

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

7.99448

Exp number, first 60 AAs:

7.87402

Total prob of N-in:

0.34395

outside

1  -  109

 

 

Pi

217.928957

Theta

160.443255

Tajima's D

1.126693

CLR

0

CSRT

0.693165341732913

Interpretation

Uncertain