Gene

KWMTBOMO03327

Pre Gene Modal

BGIBMGA006408

Annotation

PREDICTED:_tetraspanin-5_[Amyelois_transitella]

Location

Bomo_Chr6(-):4711781-4720716      View in EpiBrowser

Full name

Tetraspanin      

Location in the cell

PlasmaMembrane   Reliability : 4.717

CDS

ATGCCAGGTGTAAGAAAATATCGTCGTGACACAAGTGAAGTCAGTTGTTGTTTAAAATATGTAATTTTTGGTGTAAATGTTTTGTTCTGGTTAGTGGGCTTAATAGTCCTCGCTGTGGGTGTGTGGTCTTGGACAGAAAAAGACACCTTCAACAACTTGTCCCGCCTTACAAACATAGCTTTAGATCCAGCATTCATACTCATATGTGTTGGCACAATAACATTCATAATTGGCTTCACTGGGTGTGTTGGTGCACTTCGTGAAAATACTTGTTTGTTAGCTTGTTATGCTGTGTTTTTGGCACTTCTGCTACTTGCAGAGATGACAACTGGAATCCTGTTCTTTGTCTTCAAGGACTGGATAAAACAACAGGCCACGACTGGATTTCAAACGTTCATCGTCCACTATAGAGAAGACCCCGATCAACAAAACATGATCGATTGGATCCAAGAAGAATGGCTCCAGTGTTGCGGCGTCGAGGGTCCCAAGGACTGGGACAGGAACGCGTACTTCAACTGTTCGAGTGGGGCGGCCGGCGCTAGGGAGGCGTGCGGCGTGCCCTTCAGCTGCTGCAGGAACAAGCCTCAGGACATCATAAGGAACAAGCAGTGTGGATATGACGTCAGGAAGTCGCCCGACACTTTAGAAATTGCTAAGATAATATACGATAAAGGTTGCCTCGAAGCAGCCGAGGAGTGGTTCGAACACAACCTGTTGATTGTAGCGACTTCGGCTGTATGTATCGCTTTTGCACAAATCCTGGGTATATGCTTTGCTCAGAACCTACGAGCGGACATCTTCGCTCAAATGGCGAAGTGGCACTGA

Protein

MPGVRKYRRDTSEVSCCLKYVIFGVNVLFWLVGLIVLAVGVWSWTEKDTFNNLSRLTNIALDPAFILICVGTITFIIGFTGCVGALRENTCLLACYAVFLALLLLAEMTTGILFFVFKDWIKQQATTGFQTFIVHYREDPDQQNMIDWIQEEWLQCCGVEGPKDWDRNAYFNCSSGAAGAREACGVPFSCCRNKPQDIIRNKQCGYDVRKSPDTLEIAKIIYDKGCLEAAEEWFEHNLLIVATSAVCIAFAQILGICFAQNLRADIFAQMAKWH

Similarity

Belongs to the tetraspanin (TM4SF) family.

Feature

chain  Tetraspanin

Uniprot

A0A2H1V2B2   A0A212F4J3   A0A194Q360   A0A158NFV6   H9JA63   A0A3L8DQX4   + More
A0A158NFV5   A0A0V0GAP8   A0A023F4A9   A0A158NFV7   D6W9I8   A0A1Y1KES5   A0A1W4WD43   A0A2A3EL44   A0A087ZUF3   V9I7Y0   A0A0P5QP76   A0A026WQA6   A0A2R5L7A7   T1IXS3   A0A1W4WN44   A0A1B6D9T3   U4TXH6   A0A1W4WPB5   A0A1B6GPS6   E0VEC0   A0A0P5SIF6   C1BSU1   A0A0K8TME5   A0A0Q9W8M5   A0A0Q9XHJ1   A0A1E1X9F1   A0A224Z9X6   L7M873   V5GZ73   A0A131ZC21   A0A0P4W5J1   A0A0P4VZ51   E9G2P4   C1BNA7   A0A336K1X4   C1C1S8   A0A0R3NQJ4   A0A023GMT0   A0A0P8XFL7   A0A0A9W5C7   A0A3B0JVG1   A0A0M5IWA0   A0A2S2NEM8   A0A0A1X426   A0A151XC51   A0A131XI42   A0A034WK28   A0A1A9UNL5   U5EZ55   A0A0J9QWR2   A0A1W4UNB7   A0A0K8SPY9   A0A0K8V9G0   B4KGG6   A0A0K8W927   A0A1B0FKI9   B4LR77   M9NCS1   A0A0Q9WQE5   A0A336K357   A0A194RAK7   A0A0P5WWQ4   A0A0P5PL72   A0A0P6E3G7   A0A336K6D4   A0A0P5PUX4   A0A2P6KRA5   Q29PM2   A0A0P5QVA8   A0A0Q9X7D3   V9I9N5   B4JC23   A0A1I8MY85   B4G6L1   B3MMQ5   A0A0P6C022   A0A0P5ZXU0   A0A0P5XQX5   A0A0R3NWZ5   N6U192   A0A0R1DLG4   A0A0R1DLE2   B4Q457   A0A1W4UQ68   A0A3B0KQD9   A0A0K2UBA0   Q9VMJ6   Q32KF8   A0A1I8PYF5   B4MUZ3   A0A154PKG0   A0A0L7QRI9   A0A2J7Q9Y9   A0A2H8TRC7  

Pubmed

22118469    26354079    21347285    19121390    30249741    25474469    + More
18362917    19820115    28004739    24508170    23537049    20566863    26369729    17994087    18057021    28503490    28797301    25576852    25765539    26830274    21292972    15632085    25401762    26823975    25830018    28049606    25348373    22936249    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    25315136    17550304   

EMBL

ODYU01000347    SOQ34949.1    AGBW02010347    OWR48665.1    KQ459551    KPI99992.1    + More
ADTU01014796    ADTU01014797    ADTU01014798    ADTU01014799    ADTU01014800    ADTU01014801    ADTU01014802    ADTU01014803    ADTU01014804    ADTU01014805    BABH01009078    BABH01009079    QOIP01000006    RLU22198.1    GECL01000873    JAP05251.1    GBBI01002371    JAC16341.1    KQ971312    EEZ98499.2    GEZM01087428    JAV58700.1    KZ288223    PBC31992.1    JR036483    AEY57175.1    GDIQ01186775    GDIQ01121352    JAL30374.1    KK107135    EZA58108.1    GGLE01001268    MBY05394.1    JH431661    GEDC01014918    JAS22380.1    KB630198    KB631707    ERL83471.1    ERL85502.1    GECZ01005348    JAS64421.1    DS235088    EEB11726.1    GDIP01139358    JAL64356.1    BT077670    ACO12094.1    GDAI01002066    JAI15537.1    CH940649    KRF81160.1    CH933807    KRG03112.1    GFAC01003314    JAT95874.1    GFPF01012266    MAA23412.1    GACK01005720    JAA59314.1    GANP01008553    JAB75915.1    GEDV01000511    JAP88046.1    GDRN01085646    JAI61318.1    GDRN01085645    JAI61319.1    GL732530    EFX86476.1    BT076086    ACO10510.1    UFQS01000065    UFQT01000065    SSW98916.1    SSX19302.1    BT080807    ACO15231.1    CH379058    KRT03330.1    GBBM01000264    JAC35154.1    CH902620    KPU73713.1    GBHO01041913    GBHO01041911    GBRD01010469    GBRD01010467    GDHC01001648    JAG01691.1    JAG01693.1    JAG55355.1    JAQ16981.1    OUUW01000010    SPP86087.1    CP012523    ALC38768.1    GGMR01003024    MBY15643.1    GBXI01008203    JAD06089.1    KQ982314    KYQ57933.1    GEFH01002696    JAP65885.1    GAKP01004462    JAC54490.1    GANO01001403    JAB58468.1    CM002910    KMY88433.1    GBRD01010470    GBRD01010468    GDHC01008806    JAG55356.1    JAQ09823.1    GDHF01017114    JAI35200.1    EDW12162.1    GDHF01018209    GDHF01004663    JAI34105.1    JAI47651.1    CCAG010008395    EDW63541.1    AE014134    AFH03585.1    CH963857    KRF98436.1    SSW98917.1    SSX19303.1    KQ460473    KPJ14534.1    GDIP01080961    JAM22754.1    GDIP01197098    GDIQ01127354    GDIQ01031729    JAJ26304.1    JAL24372.1    GDIQ01069121    JAN25616.1    SSW98915.1    SSX19301.1    GDIQ01123853    JAL27873.1    MWRG01006618    PRD28842.1    EAL34271.1    GDIQ01109194    JAL42532.1    KRG03113.1    JR036482    JR036484    AEY57174.1    AEY57176.1    CH916368    EDW03036.1    CH479180    EDW28236.1    EDV31946.1    GDIP01007842    JAM95873.1    GDIP01037515    JAM66200.1    GDIP01080960    JAM22755.1    KRT03331.1    APGK01010027    APGK01053220    KB741223    KB738096    ENN72322.1    ENN82771.1    CM000157    KRJ98056.1    KRJ98058.1    CM000361    EDX03890.1    KMY88432.1    SPP86088.1    HACA01018147    CDW35508.1    AAF52320.2    BT023921    ABB36425.1    EDW76338.1    KQ434946    KZC12336.1    KQ414777    KOC61243.1    NEVH01016341    PNF25396.1    GFXV01004910    MBW16715.1   

Proteomes

UP000007151    UP000053268    UP000005205    UP000005204    UP000279307    UP000007266    + More
UP000192223    UP000242457    UP000005203    UP000053097    UP000030742    UP000009046    UP000008792    UP000009192    UP000000305    UP000001819    UP000007801    UP000268350    UP000092553    UP000075809    UP000078200    UP000192221    UP000092444    UP000000803    UP000007798    UP000053240    UP000001070    UP000095301    UP000008744    UP000019118    UP000002282    UP000000304    UP000095300    UP000076502    UP000053825    UP000235965   

PRIDE

H9JA63    Q9VMJ6    Q32KF8   

Pfam

PF00335   Tetraspanin

Interpro

IPR000301   Tetraspanin        + More
IPR018499   Tetraspanin/Peripherin       
IPR008952   Tetraspanin_EC2_sf       
IPR018503   Tetraspanin_CS       

SUPFAM

SSF48652   SSF48652       

Gene 3D

1.10.1450.10    

ProteinModelPortal

A0A2H1V2B2   A0A212F4J3   A0A194Q360   A0A158NFV6   H9JA63   A0A3L8DQX4   + More
A0A158NFV5   A0A0V0GAP8   A0A023F4A9   A0A158NFV7   D6W9I8   A0A1Y1KES5   A0A1W4WD43   A0A2A3EL44   A0A087ZUF3   V9I7Y0   A0A0P5QP76   A0A026WQA6   A0A2R5L7A7   T1IXS3   A0A1W4WN44   A0A1B6D9T3   U4TXH6   A0A1W4WPB5   A0A1B6GPS6   E0VEC0   A0A0P5SIF6   C1BSU1   A0A0K8TME5   A0A0Q9W8M5   A0A0Q9XHJ1   A0A1E1X9F1   A0A224Z9X6   L7M873   V5GZ73   A0A131ZC21   A0A0P4W5J1   A0A0P4VZ51   E9G2P4   C1BNA7   A0A336K1X4   C1C1S8   A0A0R3NQJ4   A0A023GMT0   A0A0P8XFL7   A0A0A9W5C7   A0A3B0JVG1   A0A0M5IWA0   A0A2S2NEM8   A0A0A1X426   A0A151XC51   A0A131XI42   A0A034WK28   A0A1A9UNL5   U5EZ55   A0A0J9QWR2   A0A1W4UNB7   A0A0K8SPY9   A0A0K8V9G0   B4KGG6   A0A0K8W927   A0A1B0FKI9   B4LR77   M9NCS1   A0A0Q9WQE5   A0A336K357   A0A194RAK7   A0A0P5WWQ4   A0A0P5PL72   A0A0P6E3G7   A0A336K6D4   A0A0P5PUX4   A0A2P6KRA5   Q29PM2   A0A0P5QVA8   A0A0Q9X7D3   V9I9N5   B4JC23   A0A1I8MY85   B4G6L1   B3MMQ5   A0A0P6C022   A0A0P5ZXU0   A0A0P5XQX5   A0A0R3NWZ5   N6U192   A0A0R1DLG4   A0A0R1DLE2   B4Q457   A0A1W4UQ68   A0A3B0KQD9   A0A0K2UBA0   Q9VMJ6   Q32KF8   A0A1I8PYF5   B4MUZ3   A0A154PKG0   A0A0L7QRI9   A0A2J7Q9Y9   A0A2H8TRC7  

PDB

5TCX     E-value=2.63646e-14,     Score=189

KEGG

101738541    K17345 tetraspanin-5 | (RefSeq) tetraspanin-5

GO

GO:0016021   GO:0005887   GO:0046907   GO:0045747   GO:0005623   GO:0005520   GO:0005576   GO:0005515   GO:0033177   GO:0000287   GO:0003723   GO:0006270   GO:0042555   GO:0048384  

Subcellular location

Membrane  

Length:

274

Number of predicted TMHs:

4

Exp number of AAs in TMHs:

90.1057300000001

Exp number, first 60 AAs:

23.20625

Total prob of N-in:

0.99738

POSSIBLE N-term signal

sequence

inside

1  -  19

TMhelix

20  -  42

outside

43  -  63

TMhelix

64  -  86

inside

87  -  92

TMhelix

93  -  115

outside

116  -  239

TMhelix

240  -  262

inside

263  -  274

 

 

Pi

226.417849

Theta

178.559682

Tajima's D

0.988817

CLR

0

CSRT

0.656767161641918

Interpretation

Uncertain