SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO03322
Annotation
_gustatory_receptor_50_[Bombyx_mori]
Full name
Gustatory receptor      
Location in the cell
PlasmaMembrane   Reliability : 3.85
 

Sequence

CDS
ATGGAATTTTACGATAATACCAACAAAGGATTGAAGACTATAATCTGCACTTATGCTATTGCATTGGCTCACGATTGTGAGCAAATATTTTTCTTCACATTACAAAGGGTCGTGTACTTGAGACTTTTAGTCGTAAAGAGGCATATACAAGAGTATTTTAAAGTAGATGAAGACAGTAGCAGGAAGAAACCAAACAAATATGAGATGTTATCAAATAATGTACAGCTAAATCTCACCGCTTTGCACGAAGTGTATGCGTTACTACACAACTGCGCTGAAAAACTCAACACAGTGATGAGTATTCCGGTGCTACTCATGTTATTTACTTCCGGATTATCCACGACTATTCTTCTGAAATTTTTTGTTAGAGTCATACAATTAACGGATCCTTCAAATCCGGGTTCAGCAATCGGAGTGTGCATGTATTTAATAGTGCGTTGCATCAAATACACGTTGTTAGTTGTGATCTCGTGCTATTACTCAAGCATCACTGCAACTCAAGTTTCTCTTATTCGTATCACGATTCATGATGCCATCAACACTGTTCCACTGGGTAAGTGTATTCGAAATGTCATAGATTAA
Protein
MEFYDNTNKGLKTIICTYAIALAHDCEQIFFFTLQRVVYLRLLVVKRHIQEYFKVDEDSSRKKPNKYEMLSNNVQLNLTALHEVYALLHNCAEKLNTVMSIPVLLMLFTSGLSTTILLKFFVRVIQLTDPSNPGSAIGVCMYLIVRCIKYTLLVVISCYYSSITATQVSLIRITIHDAINTVPLGKCIRNVID

Summary

Description
Gustatory receptor which mediates acceptance or avoidance behavior, depending on its substrates.
Similarity
Belongs to the insect chemoreceptor superfamily. Gustatory receptor (GR) family.
Pfam
PF08395   7tm_7
Interpro
IPR013604   7TM_chemorcpt       

Ontologies

Topology

Subcellular location
Cell membrane  
Length:
193
Number of predicted TMHs:
2
Exp number of AAs in TMHs:
47.81142
Exp number, first 60 AAs:
2.9269
Total prob of N-in:
0.78649
inside
1  -  102
TMhelix
103  -  125
outside
126  -  134
TMhelix
135  -  157
inside
158  -  193
 
 

Population Genetic Test Statistics

Pi
197.65078
Theta
193.983368
Tajima's D
0.140017
CLR
0.000001
CSRT
0.412679366031698
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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