SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO03315
Pre Gene Modal
BGIBMGA006413
Annotation
PREDICTED:_DNA_ligase_1-like_isoform_X3_[Monodelphis_domestica]
Location in the cell
Cytoplasmic   Reliability : 2.17
 

Sequence

CDS
ATGTTGAGTTTGTTGAAGTTGTGCGAGGAGTTAAAGGTTATTAAAGAGGTTGAGAAGGAGTTAAAGGTTATTAAAGAGGTTGAGAAGGAGTTAAAGGTTATTAAAGAGGTTGAGAAGGAGTTAAAGGTTATTAAAGAGGTTGAGAAGGAGTTAAAGGTTATTAAAGAGGTTGAGAAGGAGTTAAAGGTTATTAAAGAGGTTGAGAAGGAGTTAAAGGTTATTAAAGAGGTTGAGAAGGCGTTTAAGGTTATTAAAGAGGTTGAGAAGGCGTTTAAGGTTATTAAAGAGGTTGAGAAGGCGTTAAAAGTTTTAAATAAACTTGAAGAGTTTATGTAG
Protein
MLSLLKLCEELKVIKEVEKELKVIKEVEKELKVIKEVEKELKVIKEVEKELKVIKEVEKELKVIKEVEKELKVIKEVEKAFKVIKEVEKAFKVIKEVEKALKVLNKLEEFM

Summary

Uniprot
ProteinModelPortal

Ontologies

GO

Topology

Length:
111
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0
Exp number, first 60 AAs:
0
Total prob of N-in:
0.04825
outside
1  -  111
 
 

Population Genetic Test Statistics

Pi
178.232743
Theta
144.017484
Tajima's D
1.52837
CLR
0.186221
CSRT
0.791360431978401
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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