Gene

KWMTBOMO03314  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA006414

Annotation

ribosomal_protein_L15_[Bombyx_mori]

Location

Bomo_Chr6(-):4152757-4154920      View in EpiBrowser

Full name

Ribosomal protein L15       + More
60S ribosomal protein L15      

Alternative Name

YL10

Location in the cell

Nuclear   Reliability : 2.624

CDS

ATGGGTGCCTACAGATATATTCAGGAGTTGTATAGGAAAAAACTGAGCGATGTTATGCGTTTTTTGTTGCGTGTGAGAGTATGGCAGTACCGTCAGTTGACTCGTATGCACCGCGCTCCCAGGCCCACAAGGCCGGACAAAGCCCGAAGACTAGGCTACCGTGCTAAACAAGGTTATGTTGTATTCAGAATCCGTGTGCGACGTGGTGGCCGCAAGCGTCCAGTTGCTAAGGGTGCCACTTATGGCAAGCCCAAGAGCCATGGTGTCAACCAGTTGAAGCCCACGCGCAACCTTCAATCCATTGCTGAGGAACGTGTTGGCCGTCGTTGCGGTGGTCTCCGTGTGTTGAGCTCTTACTGGGTTGCACAAGATTCTTCATACAAGTATTTCGAGGTTATCCTCGTGGACCCGTCACACAAGGCCATTCGTCGCGATCCTAAGATCAACTGGATCGTGAATGCTGTACATAAGCATCGTGAGATGCGTGGTCTGACTTCGGCTGGTCGCAGCTCCCGAGGTCTCGGCAAGGGACATAGATACTCTCAAACAAAGGGAGGCTCACGCCGGGCAGCTTGGCTCAGACGCAACACTCTTCAACTACGTCGCAAACGATAA

Protein

MGAYRYIQELYRKKLSDVMRFLLRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQGYVVFRIRVRRGGRKRPVAKGATYGKPKSHGVNQLKPTRNLQSIAEERVGRRCGGLRVLSSYWVAQDSSYKYFEVILVDPSHKAIRRDPKINWIVNAVHKHREMRGLTSAGRSSRGLGKGHRYSQTKGGSRRAAWLRRNTLQLRRKR

Similarity

Belongs to the eukaryotic ribosomal protein eL15 family.

Keywords

Ribonucleoprotein   Ribosomal protein  

Feature

chain  60S ribosomal protein L15

Uniprot

Q5UAS3   A0A3G1T1G2   G0ZEI4   D1LYQ7   A0A212FN80   A0A1E1WGL0   + More
E3UUW2   A0A1E1WHT3   E7DZ66   Q8I9V9   A0A2W1BYV5   I4DM09   A0A194R5F9   I4DIF9   Q6F463   A0A2A4IUE9   S4NLL9   D6X3S2   I6LV97   Q4GXH8   D1M845   Q4GXI4   A0A109NI04   Q4GXI3   A0A2A3EDV5   V9IKB3   A0A087ZZ05   A0A0M8ZVV2   A0A310SK88   A0A0L7RDA9   E2C0G0   Q4GXI1   A0A1B6FKH1   A0A1B6JKQ0   A0A2J7QYK7   E9IYP4   A0A1B6M3G8   F4W5B8   A0A195BTH7   A0A158NYT9   A0A151JSL2   A0A1B6G6Y0   A0A1B6JE73   A0A1W4WA69   A0A195CXL2   A0A067RHG8   A0A151X300   A0A0J7NE56   A0A2P8YPD4   A0A232EWR5   A0A154PB49   Q4GXI2   Q56FL0   A0A1B6DDN6   A0A1B6CE49   A0A1L8DS12   K7J365   E0VKC6   A0A224XXS9   A0A146LDT1   A0A1D1YZH5   A0A0K8SIG3   A0A0A9ZF88   R4G8M4   A0A0L7LI92   A0A0P4VKP7   A0A0V0G2S0   Q4PM43   A0A0K8RI48   A0A224YS90   A0A131Z6K4   A0A2R7WGX5   A0A1Y1NHZ6   E2ALF0   A0A131XLY4   P30736   V5IK30   A0A0A1XHU1   A2I405   A0A026W7L1   A0A0K8UXR6   A0A1J1HYB1   Q0PXY7   A0A1I8QCY8   A0A1D2MUQ7   F6GPK6   A0A1L8EHD9   A0A171B8C4   A0A1I8M8D9   G3MML2   A0A0L0BYX6   A0A061QFU0   A0A023FHY7   A0A293LX50   A0A1W4ULV1   B4NTI4   A0A3B0KIM6   B5DSA7   B4GE69   B4ILN4  

Pubmed

19121390    22118469    12542638    28756777    22651552    26354079    + More
23622113    18362917    19820115    22516182    23537049    20798317    21282665    21719571    21347285    24845553    29403074    28648823    20075255    20566863    26823975    25401762    26227816    27129103    16431279    28797301    26830274    28004739    28049606    1437565    25765539    25830018    24508170    30249741    27289101    21473924    25315136    22216098    26108605    17994087    15632085   

EMBL

BABH01009009    AY769285    AAV34827.1    MG992386    AXY94824.1    JF265062    + More
AEL28893.1    GU084331    ACY95364.1    AGBW02006689    OWR55204.1    GDQN01004956    GDQN01003572    JAT86098.1    JAT87482.1    HM590402    ADP21471.1    GDQN01004512    JAT86542.1    HQ424769    ADT80713.1    AF441167    ODYU01004739    AAO15464.1    SOQ44934.1    KZ149939    PZC76963.1    AK402327    BAM18949.1    KQ460685    KPJ12912.1    AK401077    KQ459551    BAM17699.1    KPJ00002.1    AB180427    BAD26671.1    NWSH01006705    PCG63299.1    GAIX01014636    JAA77924.1    KQ971377    EEZ97379.1    APGK01043560    BT127080    BT128243    KB741015    KB632161    AEE62042.1    AEE63203.1    ENN75319.1    ERL89243.1    AM049045    CAJ17284.1    GU120469    ACY71319.1    AM049039    CAJ17278.1    KC507339    AHB12462.1    AM049040    CAJ17279.1    KZ288269    PBC29935.1    JR049384    AEY60946.1    KQ435824    KOX72185.1    KQ761768    OAD57096.1    KQ414613    KOC68957.1    GL451783    EFN78553.1    AM049042    CAJ17281.1    GECZ01019084    JAS50685.1    GECU01007936    JAS99770.1    NEVH01009087    PNF33670.1    GL767043    EFZ14326.1    GEBQ01009502    JAT30475.1    GL887645    EGI70568.1    KQ976407    KYM91406.1    ADTU01004265    KQ978543    KYN30200.1    GECZ01011610    JAS58159.1    GECU01010224    GECU01009467    GECU01005678    JAS97482.1    JAS98239.1    JAT02029.1    KQ977220    KYN04884.1    KK852470    KDR23227.1    KQ982566    KYQ54772.1    LBMM01006205    KMQ90810.1    PYGN01000453    PSN46109.1    NNAY01001827    OXU22788.1    KQ434864    KZC09061.1    AM049041    CAJ17280.1    AY961490    AAX62392.1    GEDC01013546    GEDC01009833    GEDC01008725    JAS23752.1    JAS27465.1    JAS28573.1    GEDC01025607    JAS11691.1    GFDF01004920    JAV09164.1    DS235241    EEB13832.1    GFTR01003423    JAW13003.1    GDHC01013353    JAQ05276.1    GDJX01007914    JAT60022.1    GBRD01012726    JAG53098.1    GBHO01001008    JAG42596.1    ACPB03022084    GAHY01000717    JAA76793.1    JTDY01001076    KOB74956.1    GDKW01000922    JAI55673.1    GECL01003718    JAP02406.1    ABJB011018666    DQ066284    DS777384    AAY66921.1    EEC09456.1    GADI01003649    GEFM01005441    JAA70159.1    JAP70355.1    GFPF01009342    MAA20488.1    GEDV01002132    JAP86425.1    KK854804    PTY18866.1    GEZM01001891    GEZM01001890    JAV97471.1    GL440604    EFN65755.1    GEFH01001219    JAP67362.1    X68332    GANP01000402    JAB84066.1    GBXI01003368    JAD10924.1    EF070508    ABM55574.1    KK107419    QOIP01000003    EZA51029.1    RLU24948.1    GDHF01033075    GDHF01020928    GDHF01014586    GDHF01003482    JAI19239.1    JAI31386.1    JAI37728.1    JAI48832.1    CVRI01000036    CRK93079.1    DQ673399    ABG81972.1    LJIJ01000500    ODM96817.1    EZ966130    HM622068    ADK66972.1    ADN04903.1    GFDG01000698    JAV18101.1    GEMB01000153    JAS02960.1    JO843113    AEO34730.1    JRES01001139    KNC25225.1    GBFC01000101    JAC59237.1    GBBK01003753    JAC20729.1    GFWV01008533    MAA33262.1    CH983164    EDX15642.1    OUUW01000014    SPP88370.1    CH475481    EDY71455.1    CH479182    EDW33904.1    CH480881    EDW54725.1   

Proteomes

UP000005204    UP000007151    UP000053240    UP000053268    UP000218220    UP000007266    + More
UP000019118    UP000030742    UP000242457    UP000005203    UP000053105    UP000053825    UP000008237    UP000235965    UP000007755    UP000078540    UP000005205    UP000078492    UP000192223    UP000078542    UP000027135    UP000075809    UP000036403    UP000245037    UP000215335    UP000076502    UP000002358    UP000009046    UP000015103    UP000037510    UP000001555    UP000000311    UP000053097    UP000279307    UP000183832    UP000079169    UP000095300    UP000094527    UP000095301    UP000037069    UP000192221    UP000000304    UP000268350    UP000001819    UP000008744    UP000001292   

PRIDE

Q5UAS3    A0A087ZZ05    Q4PM43    V5IK30    G3MML2   

Pfam

PF00827   Ribosomal_L15e

Interpro

IPR000439   Ribosomal_L15e        + More
IPR024794   Rbsml_L15e_core_dom_sf       
IPR020925   Ribosomal_L15e_CS       
IPR012678   Ribosomal_L23/L15e_core_dom_sf       

SUPFAM

SSF54189   SSF54189       

Gene 3D

3.40.1120.10    

ProteinModelPortal

Q5UAS3   A0A3G1T1G2   G0ZEI4   D1LYQ7   A0A212FN80   A0A1E1WGL0   + More
E3UUW2   A0A1E1WHT3   E7DZ66   Q8I9V9   A0A2W1BYV5   I4DM09   A0A194R5F9   I4DIF9   Q6F463   A0A2A4IUE9   S4NLL9   D6X3S2   I6LV97   Q4GXH8   D1M845   Q4GXI4   A0A109NI04   Q4GXI3   A0A2A3EDV5   V9IKB3   A0A087ZZ05   A0A0M8ZVV2   A0A310SK88   A0A0L7RDA9   E2C0G0   Q4GXI1   A0A1B6FKH1   A0A1B6JKQ0   A0A2J7QYK7   E9IYP4   A0A1B6M3G8   F4W5B8   A0A195BTH7   A0A158NYT9   A0A151JSL2   A0A1B6G6Y0   A0A1B6JE73   A0A1W4WA69   A0A195CXL2   A0A067RHG8   A0A151X300   A0A0J7NE56   A0A2P8YPD4   A0A232EWR5   A0A154PB49   Q4GXI2   Q56FL0   A0A1B6DDN6   A0A1B6CE49   A0A1L8DS12   K7J365   E0VKC6   A0A224XXS9   A0A146LDT1   A0A1D1YZH5   A0A0K8SIG3   A0A0A9ZF88   R4G8M4   A0A0L7LI92   A0A0P4VKP7   A0A0V0G2S0   Q4PM43   A0A0K8RI48   A0A224YS90   A0A131Z6K4   A0A2R7WGX5   A0A1Y1NHZ6   E2ALF0   A0A131XLY4   P30736   V5IK30   A0A0A1XHU1   A2I405   A0A026W7L1   A0A0K8UXR6   A0A1J1HYB1   Q0PXY7   A0A1I8QCY8   A0A1D2MUQ7   F6GPK6   A0A1L8EHD9   A0A171B8C4   A0A1I8M8D9   G3MML2   A0A0L0BYX6   A0A061QFU0   A0A023FHY7   A0A293LX50   A0A1W4ULV1   B4NTI4   A0A3B0KIM6   B5DSA7   B4GE69   B4ILN4  

PDB

4V6W     E-value=1.83315e-59,     Score=577

KEGG

692670    K02877 large subunit ribosomal protein L15e | (RefSeq) RpL15; ribosomal protein L15

PATHWAY

03010    Ribosome - Bombyx mori (domestic silkworm)

GO

GO:0005840   GO:0006412   GO:0003735   GO:0022625   GO:0003723   GO:0002181   GO:0005622   GO:0006432   GO:0000287   GO:0006270   GO:0042555   GO:0048384  

PANTHER

PTHR11847  

Length:

204

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.000740000000000001

Exp number, first 60 AAs:

0.0003

Total prob of N-in:

0.26992

outside

1  -  204

 

 

Pi

261.453165

Theta

222.773403

Tajima's D

0.547087

CLR

0

CSRT

0.525123743812809

Interpretation

Uncertain