Silkworm Genome Informatics Database

Gene

KWMTBOMO03312

Pre Gene Modal

BGIBMGA006415

Annotation

chorion_b-ZIP_transcription_factor_[Bombyx_mori]

Location

Bomo_Chr6(-):4122402-4127230 View in EpiBrowser

Location in the cell

Nuclear Reliability : 4.838

CDS

ATGGTTTTTTCGCAAACGAGTCTCAAGACTCGAAACATTTTGAAAGTAGTAGACCTAGATCGTTTAAAGCCAGAAAAGAACCAACAGGCGAACGGTCTAACCGGAGTGATTCACCAAGGAAACAACGGAGTAATGCCTCAAGGAACAGTGCCAACAGCCAGCTTTTCCGAGGAATATTTGAAACCGGAACAGTTATACGCGAGCACAATGCTTCACGGTTCGAACTCAGAGTTCTTCCAAGAACTGGATCAGTTGTGCTCCGATCCAGAAAGGGAAGAACAAACACGGACCATTGATTCTCATAAAGAAACCGAAAAACGGGCATGTTCCTTCGACACACCGCACACATCATTCTGCCTACAAGGGTGGGATGTACAGGACGATAACTCTCCCTACGGCCAGGCAGGCTTTTATAGTAACACCTCCATGGACACGATCTCTCCGGCTTTCGATGGGTTCGCTCTTAATAATGACTTAGGGCCGATTCCAGAGGAAGCTAATGAGGTTCAATTTCCAGAACAATTTTTGGATATCAGCAGCCTGCCTGTCGTTATCGGAGGTTTAACGTCCGCAGCGGCCCTTGACGATTCCTGGGCTTATCCAGAACCAGTCAACTGGACCAACACATTCAACACAGATAACACTATAAACACAGACACACAAAAAACATTGCCCTTGACCGAAGACGACTCTTGTGATGCAAAAATTATTTCTTTCCTGCCAAGTGAAGTCGAAAATTGTGATGTATTTTTACCTAAACTCATCGATCAGTGTGATGATGCAGTTTTACAAAAAGAAGGAATGCACAAGTGCGAAAGAGGACTTTCCATTGACGTAGGAATTCGTACACCAAGCTGGCCAGCTGATGCGATTAGCACTCCTGAAGTTCTTAGTTACGTCGAGCAATTAGAAAAAGAAAAGTGCTCACGTGCATTTAAGGAACTCCGCAATGATTTGCCTCTTCAAAAAACGGAACTAGACCTAAACTCAGTAGTAAACATCATTCCATGCAAAAATAATGATTATGAACCAGTCACACCAAAAAGTGAATCTCAGCTGGATTCTGATAATGAAGACAGAAGAACACATTTAAGCAAAAGGAAGCATCTGGACAGTGATGATTCTGATGAAACCTATACACCTTTTGCTGAACAGACATCACGAAAATATAAAAGGAAAAAGTCAAATGTTCCAATCAAAGAAATGATCCTTGCACTTGAGGGATCGCGACAGGTTGGGACCAGAAGAAGAGGCCGACCCCCCAAGAGACGAGACAGCACACTATCATCCACATGCAGCATTGATGAAAATTCATCAAATATTTCCACTCAAGAATCAAAGTATAGAGAGTTGAGAGACAAGAATAATGAAGCTTCCAAAAGATCCAGAATGAACAGGAAACTCAAAGAACTACAGATGGAACAATTGGCAATTGATTTGGAAGAAAGAAATAAAAAACTAAGAGTTAAAGCAGATATTTTGGAAGAGCTGACCAAAAAAGTAAAAGATGCATTGATGGCTGCAATTTTACAGAAATGA

Protein

MVFSQTSLKTRNILKVVDLDRLKPEKNQQANGLTGVIHQGNNGVMPQGTVPTASFSEEYLKPEQLYASTMLHGSNSEFFQELDQLCSDPEREEQTRTIDSHKETEKRACSFDTPHTSFCLQGWDVQDDNSPYGQAGFYSNTSMDTISPAFDGFALNNDLGPIPEEANEVQFPEQFLDISSLPVVIGGLTSAAALDDSWAYPEPVNWTNTFNTDNTINTDTQKTLPLTEDDSCDAKIISFLPSEVENCDVFLPKLIDQCDDAVLQKEGMHKCERGLSIDVGIRTPSWPADAISTPEVLSYVEQLEKEKCSRAFKELRNDLPLQKTELDLNSVVNIIPCKNNDYEPVTPKSESQLDSDNEDRRTHLSKRKHLDSDDSDETYTPFAEQTSRKYKRKKSNVPIKEMILALEGSRQVGTRRRGRPPKRRDSTLSSTCSIDENSSNISTQESKYRELRDKNNEASKRSRMNRKLKELQMEQLAIDLEERNKKLRVKADILEELTKKVKDALMAAILQK

Uniprot

Q538A5 A0A2W1BTJ6 A0A2A4ISV9 A0A194R5W8 A0A1E1WUG3 A0A194Q3R7 + More
A0A2H1VHH2 A0A2A4IRE2 A0A0L7KWM2 A0A1E1WFR0 A0A1E1WKG5 A0A212FN81 A0A3B0F270 S4PM10 A0A1E1WA63

Pubmed

16202393 19121390 28756777 26354079 26227816 22118469 + More
23622113

EMBL

BABH01009008 AY618899 AAV34566.1 KZ149939 PZC76965.1 NWSH01008389 + More
PCG62576.1 KQ460685 KPJ12909.1 GDQN01008271 GDQN01000436 JAT82783.1 JAT90618.1 KQ459551 KPJ00004.1 ODYU01002587 SOQ40283.1 PCG62577.1 JTDY01004972 KOB67525.1 GDQN01005220 JAT85834.1 GDQN01003636 JAT87418.1 AGBW02006689 OWR55202.1 RBVL01000077 RKO12377.1 GAIX01003780 JAA88780.1 GDQN01007198 GDQN01000754 JAT83856.1 JAT90300.1

Proteomes

UP000005204 UP000218220 UP000053240 UP000053268 UP000037510 UP000007151 + More
UP000276569

PRIDE

Q538A5

Pfam

PF07716 bZIP_2

Interpro

IPR004827 bZIP + More
IPR040223 PAR_bZIP

ProteinModelPortal

Q538A5 A0A2W1BTJ6 A0A2A4ISV9 A0A194R5W8 A0A1E1WUG3 A0A194Q3R7 + More
A0A2H1VHH2 A0A2A4IRE2 A0A0L7KWM2 A0A1E1WFR0 A0A1E1WKG5 A0A212FN81 A0A3B0F270 S4PM10 A0A1E1WA63

KEGG

692648 no KO assigned | (RefSeq) Cbz; chorion b-ZIP transcription factor

GO

GO:0003700 GO:0016021 GO:0006357 GO:0006355 GO:0043565 GO:0005524 GO:0006432 GO:0000287 GO:0003723 GO:0006270 GO:0042555 GO:0048384

PANTHER

PTHR11988

Length:

512

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00076

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00234

outside

1 - 512

Pi

240.560647

Theta

207.438656

Tajima's D

0.62438

CLR

0

CSRT

0.547922603869807

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics