SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO03310
Pre Gene Modal
BGIBMGA006417
Annotation
PREDICTED:_tyrosine-protein_kinase_Fps85D_isoform_X2_[Amyelois_transitella]
Full name
Tyrosine-protein kinase       + More
Tyrosine-protein kinase Fer      
Non-specific protein-tyrosine kinase      
Location in the cell
Cytoplasmic   Reliability : 1.655 Nuclear   Reliability : 1.947
 

Sequence

CDS
ATGGGATACACTACGAATGGCGCGGGTCGGGCAGCGCACGAGGCGCTGTTGGCGCGACAGGATGCTGAGCTAAGGCTCATGGAAGCTATGAAGAGAAGCCTCCAAGCAAAGATGAAAAGCGACAGAGAATATGCTCTGGCGCTAAGTGCTGCGGCTGCGCAGGGGCAGAAGATGGACAAATGCGAAGAGCTAAATGGATCGGTGATAGCGGCAGCATGGCGTACCATGACCGAGGAGTGGGATAACACAAGTCGTCTCATCAAATTGAATGCCGAAGCTCTCGAGTCTCGAGCTCTTGATCGCCTCACCACACTGATGACAGAACGAAGGAAGGCGCGCAAAATGTACCAGGAGGATCATACAAAAATCTCTTCTCAGTTCACACAGCTATCCGAAGAAGTGCAGAGAAAACAGAGCGAGTACCAAAAGTGCCTTGAGTCTTACAAACAGATGCGGGCCAAGTTCGAAGAGAATTATCTCAAATGTCCAACTAGCAGGGGAGGGAGGAAATTAGATGAGACGAGAGACAAATATGGCAAAGCGTGCAGGAGACTCCATCGGGCACACAACGAGTATGTGTTATTGTTGGCTGAGGCGACCGAATGCGAACGAGCCCTTCGGACTGCAGCCATCCCTGCGCTTTTAGAACAGCAACGTCGCCAGGGGGAAGCTACTGCTACTTCTTGGAAAGGGATCCTTTTAGAAGTGGTGCAGCGGTCAGACTATAGTACCGAAAAGTTCAGGGAGATCCAGACCAAAGTCGAGACTACAGTGCAGAATCTGAGGCCACAAGACGAGTACAAAGAGTTCTTAGAGAAGTATAAATCGCCTCCATCGACACCAGTGATATTTACATTTGACGAAAGCCTAGTGGAAGACACGAGCGGTAAATTACAACCAAATCAACTGACAGTCGATAATCTCACAGTTGAGTGGCTGAAAGAGAAACTCACAGAGCTGGAGGCAACATTGCAGGACAACAGAGAGAAACAGACCGCTTTGCAGGGACCAGAAATTATAGGGAATGGGGTTTGCAAAAACAACAATACCGGACTCACGAACGGCGTAAATGGAATCGACAGGCATTCTCCTCCGCCGATTCCCGTCACAACATCGGAGCCCATAAAGTTGTTAGAGCTACGCGTAGCAGAACGCAAATGTGCGAAACAAGCGGAGATGATACGATCCGCGTTGGCCGAACTAGGATGTGAAGAAGCGCCCAGCGGCTGCCCGGATCTGTCGGCCGAGACAGTCGGCGTTGATAGCTTAGACGGAAGCTCTCCCGATCATCAGGTGAGCGTGAGTGAGACAGAGCGTTCTCTAGTGGAACAGGAGTGGTTCCACGGTGTATTACCACGCGAGGAGGTGGTGAGGCTGTTGCGTAGTGACGGAGACTACCTAGTCCGTGAAACAACCAGGAACCACGCGAGGCAGCTAGTGTTATCCGTTTGCTGGGGACAGCATAAGCACTTCATTGTACAGACCACGCCAGAGGGTCACTATCGTTTCGAAGGAGCAGCGTTCCCGTCCGTGGCCGAGCTGATAGCGTGGCAGAGGGCTAGCGGCGTGCCCGTGACGGCGCGTTCGGGCGCGTTACTGCGGCGCGCGGTGCCCAGAGAGAACTGGGAACTCAACAACGATGATGTACAACTGCTCGATAAGATTGGAAGGGGTAATTTCGGTGACGTGTATAAAGCGCGTCTGAAGACGACAGGACAGGAGGTAGCCGTGAAGACGTGTAGGGTTGCGCTACCAGAGGAGCAGAAGCGGACGTTCCTACAGGAGGGACGGATCCTCAAGCAGTACCAGCACCCTAACATCGTCCGGCTTATTGGCATCGCCGTACAGAAGCAACCCATTATGATTGTCATGGAGCTCGTTTCAGGTACAAATTATTATAATTTCCAGAATAATATTATGATTTTTATTGCTTACTAG
Protein
MGYTTNGAGRAAHEALLARQDAELRLMEAMKRSLQAKMKSDREYALALSAAAAQGQKMDKCEELNGSVIAAAWRTMTEEWDNTSRLIKLNAEALESRALDRLTTLMTERRKARKMYQEDHTKISSQFTQLSEEVQRKQSEYQKCLESYKQMRAKFEENYLKCPTSRGGRKLDETRDKYGKACRRLHRAHNEYVLLLAEATECERALRTAAIPALLEQQRRQGEATATSWKGILLEVVQRSDYSTEKFREIQTKVETTVQNLRPQDEYKEFLEKYKSPPSTPVIFTFDESLVEDTSGKLQPNQLTVDNLTVEWLKEKLTELEATLQDNREKQTALQGPEIIGNGVCKNNNTGLTNGVNGIDRHSPPPIPVTTSEPIKLLELRVAERKCAKQAEMIRSALAELGCEEAPSGCPDLSAETVGVDSLDGSSPDHQVSVSETERSLVEQEWFHGVLPREEVVRLLRSDGDYLVRETTRNHARQLVLSVCWGQHKHFIVQTTPEGHYRFEGAAFPSVAELIAWQRASGVPVTARSGALLRRAVPRENWELNNDDVQLLDKIGRGNFGDVYKARLKTTGQEVAVKTCRVALPEEQKRTFLQEGRILKQYQHPNIVRLIGIAVQKQPIMIVMELVSGTNYYNFQNNIMIFIAY

Summary

Description
Tyrosine-protein kinase which is required during embryogenesis for formation of the actin cable in leading edge cells of the dorsal epidermis and for the timely progression of dorsal closure. May play a role in regulation of adherens junctions and cell adhesion through phosphorylation of the beta-catenin arm.
Catalytic Activity
ATP + L-tyrosyl-[protein] = ADP + H(+) + O-phospho-L-tyrosyl-[protein]
Similarity
Belongs to the protein kinase superfamily. Tyr protein kinase family. Fes/fps subfamily.
Belongs to the protein kinase superfamily. Tyr protein kinase family.
Keywords
Alternative splicing   ATP-binding   Cell junction   Coiled coil   Complete proteome   Developmental protein   Kinase   Membrane   Nucleotide-binding   Phosphoprotein   Reference proteome   SH2 domain   Transferase   Tyrosine-protein kinase  
Feature
chain  Tyrosine-protein kinase Fer
splice variant  In isoform D.
EC Number
2.7.10.2
EMBL
KQ971382    KYB24939.1    KYB24938.1    NEVH01005277    PNF39177.1    AGBW02006689    + More
OWR55199.1    KYB24940.1    GEZM01084983    JAV60344.1    GEZM01084984    JAV60343.1    GANO01004628    JAB55243.1    GL451712    EFN78708.1    GFDF01006625    JAV07459.1    CH933806    KRG00743.1    KK107652    EZA48284.1    GAKP01020013    GAKP01020011    JAC38941.1    GAMC01014380    JAB92175.1    APCN01003223    APCN01003224    APCN01003225    APCN01003226    APCN01003227    APCN01003228    APCN01003229    CH940650    KRF82737.1    GDHF01028521    JAI23793.1    GFDL01004084    JAV30961.1    CH964232    KRF99341.1    CM000160    KRK03253.1    X52844    U50450    AE014297    BT003462    AJ002916    OUUW01000005    SPP81169.1    CM000070    KRS99698.1    CH902617    KPU79527.1    KPU79526.1    KQ983089    KYQ47663.1    GECZ01023737    JAS46032.1    KQ414613    KOC68952.1    GBBI01002679    JAC16033.1    AAAB01008888    EGK97090.1    GBHO01043648    GBRD01006599    JAF99955.1    JAG59222.1    GBHO01043646    GBRD01006598    JAF99957.1    JAG59223.1    DS235241    EEB13817.1    KK119063    KFM74587.1    GFTR01007876    JAW08550.1    JH431830    GDHC01020422    JAP98206.1    CVRI01000074    CRL07876.1    GEDC01026629    JAS10669.1    GDHC01018293    JAQ00336.1    GDIP01219564    JAJ03838.1    GDIQ01250321    JAK01404.1    GDIP01140633    JAL63081.1    LBMM01003172    KMQ93859.1    CP012526    ALC47136.1    KRG00742.1    KRK03256.1    AGB95793.1    KRF82736.1    KRK03254.1    KRF99340.1    AGB95794.1    EDW13959.2    CH480815    EDW42900.1    EDW96641.1    GECZ01019008    JAS50761.1    CH954181    EDV49797.1   
Pfam
PF00017   SH2        + More
PF07714   Pkinase_Tyr
PF00611   FCH
PF07528   DZF
Interpro
IPR001245   Ser-Thr/Tyr_kinase_cat_dom        + More
IPR011009   Kinase-like_dom_sf       
IPR035849   Fes/Fps/Fer_SH2       
IPR017441   Protein_kinase_ATP_BS       
IPR008266   Tyr_kinase_AS       
IPR016250   Tyr-prot_kinase_Fes/Fps       
IPR027267   AH/BAR_dom_sf       
IPR020635   Tyr_kinase_cat_dom       
IPR001060   FCH_dom       
IPR036860   SH2_dom_sf       
IPR000980   SH2       
IPR031160   F_BAR       
IPR000719   Prot_kinase_dom       
IPR003604   Matrin/U1-like-C_Znf_C2H2       
IPR013087   Znf_C2H2_type       
IPR006561   DZF_dom       
IPR036236   Znf_C2H2_sf       
IPR028539   Fer       
SUPFAM
SSF56112   SSF56112        + More
SSF103657   SSF103657       
SSF55550   SSF55550       
SSF57667   SSF57667       
Gene 3D
PDB
4E93     E-value=2.02351e-51,     Score=514

Ontologies

Topology

Subcellular location
Membrane   At stages 11-12 of embryogenesis, localizes to adherens junctions in epidermal cells. At stages 13-14, is no longer detected in the epidermal cell junctions which border with the amnioserosa.   With evidence from 6 publications.
Cell junction   At stages 11-12 of embryogenesis, localizes to adherens junctions in epidermal cells. At stages 13-14, is no longer detected in the epidermal cell junctions which border with the amnioserosa.   With evidence from 6 publications.
Adherens junction   At stages 11-12 of embryogenesis, localizes to adherens junctions in epidermal cells. At stages 13-14, is no longer detected in the epidermal cell junctions which border with the amnioserosa.   With evidence from 6 publications.
Length:
645
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.20314
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00104
outside
1  -  645
 
 

Population Genetic Test Statistics

Pi
172.741033
Theta
172.21988
Tajima's D
0.058667
CLR
0.572148
CSRT
0.385280735963202
Interpretation
Uncertain
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