SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO03309
Pre Gene Modal
BGIBMGA006417
Annotation
PREDICTED:_tyrosine-protein_kinase_Fps85D_isoform_X4_[Bombyx_mori]
Full name
Tyrosine-protein kinase       + More
Non-specific protein-tyrosine kinase      
Tyrosine-protein kinase Fer      
Location in the cell
Extracellular   Reliability : 1.16 Mitochondrial   Reliability : 1.542
 

Sequence

CDS
ATGGGTTTTGTCTACCCAATATTTCTTCTAGGAGGTTCTCTTCTCACATACCTCCGTACGAGGGCAGCTGCGCTTAGTTCTCGCACGCTGATGGCGATGTGCCGGGACGCGGCGGGGGGCATGCGGTACCTCGAGTCCAAGAACTGCATTCACCGCGACCTCGCCGCCAGAAACTGCCTCGTCGGAGACGACAACATTGTGAAAATATCAGACTTTGGCATGTCTAGGGAAGAAGAGGAGTACATAGTTTCCGGAGGAATGAAACAAATACCTATCAAATGGACGGCACCTGAGGCATTGAATTTCGGAAAATACACTTCGCTATGTGATGTATGGAGTTACGGAGTATTGATGTGGGAAATATTTGCAAAGGGAGACACGCCATACGCGGGAATGAGCAATTCAAGGGCTAGAGAAAAAATCGATACCGGATATCGTATGCCAGCACCGGAAGGATGTCCCGAAGACGTGTACGCACTTATGCTGAGGTGCTGGGAGTATGAGCCTGATAAGCGGCCGCATTTCCACCAGATATACACTATCATAGACAGTATATACAATAGATAA
Protein
MGFVYPIFLLGGSLLTYLRTRAAALSSRTLMAMCRDAAGGMRYLESKNCIHRDLAARNCLVGDDNIVKISDFGMSREEEEYIVSGGMKQIPIKWTAPEALNFGKYTSLCDVWSYGVLMWEIFAKGDTPYAGMSNSRAREKIDTGYRMPAPEGCPEDVYALMLRCWEYEPDKRPHFHQIYTIIDSIYNR

Summary

Description
Tyrosine-protein kinase which is required during embryogenesis for formation of the actin cable in leading edge cells of the dorsal epidermis and for the timely progression of dorsal closure. May play a role in regulation of adherens junctions and cell adhesion through phosphorylation of the beta-catenin arm.
Catalytic Activity
ATP + L-tyrosyl-[protein] = ADP + H(+) + O-phospho-L-tyrosyl-[protein]
Similarity
Belongs to the protein kinase superfamily. Tyr protein kinase family. Fes/fps subfamily.
Belongs to the protein kinase superfamily. Tyr protein kinase family.
Keywords
Alternative splicing   ATP-binding   Cell junction   Coiled coil   Complete proteome   Developmental protein   Kinase   Membrane   Nucleotide-binding   Phosphoprotein   Reference proteome   SH2 domain   Transferase   Tyrosine-protein kinase  
Feature
chain  Tyrosine-protein kinase Fer
splice variant  In isoform D.
EC Number
2.7.10.2
EMBL
BABH01009005    GAIX01004718    JAA87842.1    KZ149939    PZC76968.1    AGBW02006689    + More
OWR55199.1    KQ459579    KPI99382.1    GEDC01028363    JAS08935.1    GEDC01009251    JAS28047.1    GFTR01007876    JAW08550.1    GFDL01004084    JAV30961.1    GBBI01002679    JAC16033.1    KK852427    KDR24086.1    APCN01003223    APCN01003224    APCN01003225    APCN01003226    APCN01003227    APCN01003228    APCN01003229    CH478325    EAT33226.1    NEVH01005277    PNF39177.1    PNF39178.1    GANO01004628    JAB55243.1    PNF39179.1    GBYB01008083    JAG77850.1    ADMH02001180    ETN63822.1    PNF39180.1    GBYB01008081    JAG77848.1    KK856104    PTY24890.1    GFXV01005555    MBW17360.1    GDHC01016870    JAQ01759.1    KQ434864    KZC09059.1    KZ288269    PBC29929.1    GECU01005672    JAT02035.1    ATLV01016367    ATLV01016368    KE525079    KFB41323.1    GECZ01023737    JAS46032.1    KQ435824    KOX72190.1    GL771866    EFZ09151.1    GECZ01019008    JAS50761.1    LBMM01003172    KMQ93859.1    AAAB01008888    EAA08820.5    AXCM01005796    AXCM01005797    GGMR01010522    MBY23141.1    GFDF01006625    JAV07459.1    AXCN02001598    GAMC01014380    JAB92175.1    CH964232    KRF99341.1    ADTU01024980    GBHO01043648    GBRD01006599    JAF99955.1    JAG59222.1    KQ981261    KYN44085.1    EGK97090.1    CM000070    KRS99698.1    GL436596    EFN71763.1    OUUW01000005    SPP81169.1    KK107652    EZA48284.1    KQ980211    KYN17189.1    GAMC01014381    GAMC01014379    JAB92176.1    GBHO01043646    GBRD01006598    JAF99957.1    JAG59223.1    QOIP01000003    RLU25179.1    KRF99340.1    GBHO01043649    JAF99954.1    CM000160    KRK03253.1    KRS99699.1    KQ976720    KYM76717.1    CH940650    KRF82737.1    GEZM01084984    JAV60343.1    CH933806    KRG00743.1    DS235241    EEB13817.1    KRK03256.1    KRK03254.1    GDHF01000689    JAI51625.1    KRF82736.1    GEZM01084982    JAV60345.1    JXJN01024937    X52844    U50450    AE014297    BT003462    AJ002916    EDW80803.1    CH479186    EDW38933.1    CH902617    EDV42025.2    EAL26982.2    KPU79528.1    GEBQ01029568    JAT10409.1    KA645012    AFP59641.1    CCAG010001988   
Pfam
PF07714   Pkinase_Tyr        + More
PF00017   SH2
PF00611   FCH
PF04127   DFP
Interpro
IPR000980   SH2        + More
IPR000719   Prot_kinase_dom       
IPR020635   Tyr_kinase_cat_dom       
IPR016250   Tyr-prot_kinase_Fes/Fps       
IPR027267   AH/BAR_dom_sf       
IPR036860   SH2_dom_sf       
IPR008266   Tyr_kinase_AS       
IPR017441   Protein_kinase_ATP_BS       
IPR011009   Kinase-like_dom_sf       
IPR035849   Fes/Fps/Fer_SH2       
IPR001245   Ser-Thr/Tyr_kinase_cat_dom       
IPR031160   F_BAR       
IPR001060   FCH_dom       
IPR035929   CoaB-like_sf       
IPR007085   DNA/pantothenate-metab_flavo_C       
SUPFAM
SSF55550   SSF55550        + More
SSF103657   SSF103657       
SSF56112   SSF56112       
SSF102645   SSF102645       
PDB
4E93     E-value=1.03601e-57,     Score=561

Ontologies

Topology

Subcellular location
Membrane   At stages 11-12 of embryogenesis, localizes to adherens junctions in epidermal cells. At stages 13-14, is no longer detected in the epidermal cell junctions which border with the amnioserosa.   With evidence from 6 publications.
Cell junction   At stages 11-12 of embryogenesis, localizes to adherens junctions in epidermal cells. At stages 13-14, is no longer detected in the epidermal cell junctions which border with the amnioserosa.   With evidence from 6 publications.
Adherens junction   At stages 11-12 of embryogenesis, localizes to adherens junctions in epidermal cells. At stages 13-14, is no longer detected in the epidermal cell junctions which border with the amnioserosa.   With evidence from 6 publications.
Length:
188
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
2.09815
Exp number, first 60 AAs:
2.07882
Total prob of N-in:
0.05099
outside
1  -  188
 
 

Population Genetic Test Statistics

Pi
154.661382
Theta
126.70708
Tajima's D
0.111746
CLR
1.024815
CSRT
0.395830208489576
Interpretation
Uncertain
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