SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO03306
Pre Gene Modal
BGIBMGA006461
Annotation
PREDICTED:_probable_serine/threonine-protein_kinase_dyrk2_isoform_X1_[Bombyx_mori]
Location
Bomo_Chr6(+):3934732-3988128      View in EpiBrowser
Location in the cell
Nuclear   Reliability : 4.161
 

Sequence

CDS
ATGAACGTTCCAAACGGTCACATCACCGACGCTCACCCACTTCACACAGGCGGAGGAGACACCATCGCGATGAATCTTCTCCGCGTTCTCCTCCTGAGCAGTGGACCTCCACCCTCTCTGCCAGCAGTCGTGTTTTTACCTAGTGATGTGCTACACGTTGATGGGACTTTTAATGTAACATCTTTGCAACAGAAACCTGATAATGTGAATGATTTACAAGAAATAAACAATGTGGGTGTACCTACTTATGAGCAAAATCATAACGACCAAATCGAAGATTGTTTGCTAAATAATGACGAAATACCTGCAAATGTTTTTCTAAGAAGAACTCATAGTTTTGATATTTCGGATACTGCTACTACCGATCTTGAAAATTTCATTGATTTGGGCACGTTAAGGCAAAGACGATCTGAACCGGACTTATCGAAATATGGATTGTTTGTGGAACCTGTAGTGACATTAGAATGTGAACCCTTACAACGTTCACTCGTACTGAACAATCCTTTCTACGATAATTCACATGCGTATGATCAAATGCAGCTAAGTAACATGCTCATGCTACCGGAAAATTATTTAGCCTTCGAAGATTCTTTCATGTCTGCATGGGATTACAAACCGAACATTATAATGGATAGAGTTAACAATAATGAAATATTCTACGATGGAGTGCCTCTGATACCTTCTAACGATCCATGGTCAGTTTACAATAATGATAACACTGAATTAGAGTTTTATTCACCTCACTATGGAATACCAAGCGGAGAACAAGATGGAATAGAATATATGCCGCTCACAGATTTAGATACGATTCCACAATATATGAGTTTACCTGGAGAAAATTTAAATAATGCAACTATTGAAGCACAATCAGAACTAATTAACATCGATGCTCCTGACTTAATCAACAGCGACCTCTTAACGTTAAAAGATCCTACTCATCCTATTTCGTCAAACATCGTATCAAGTGACAAACAAGTGAGTAATATTGATTTTTGTGAAAATCGAGAATCGTCAACAGAAACGGAAGAGTTATTCAACGCCGATATATCAAACGATGTAACATCTAGTTTAGCTTTTGTACCTAGCAGCAAAAGTTCGCAGAGGCCGGATTGCTCTGATAATACGAGTGACGACACTTCCCCTTGTTCTACAGATTACCACGAAGCATCCGCTCTTGATTTAGTTCAGAGTTTAGATGAAATATCGTCCTGCGATAGCTCTAACTTTTCGCAGAGCAGAGATATCTCGCCAGTTAATAATCAACTAACAAAAACTAATGAAAACAAAGACTATGAGAATAATGTTAAGCAATGCTTAACGAAAGAACAACTCGAAACCAATATAAATGAAACTCAGCAAATTCAGCAAGAATTAATAGATAAACTAATACCTATCTTAAACATTAATAATATTTCAACTGAAGATCTCAATTTGTGTGGTTTATCATACAATAAAAAATTAAATATAAATGTAAATGAAGAGTCAGAAGAACAAAAAATAAAGTTTGCAGCAAACTCTACACAAGGGTCGAATGTGAATTCGATAATAGGAAATGTAAATAACGATGTATTGGCGGAACCGCTTACCTCTGAATCCTCTGCTGAAAGCAGCCTGCGAATAAATACGGATGATGTTTCTTCAAGCGAGAAAAATGTTGAGTGTGAAACTCCAAAAGCAAGTACATCCGTAATCAAATCTACCAAAGAAACCAAACACATTAATACTGAATCCAATCATCAAAATAGTGAACCATCAGAATATAATAATGAAGTTTCATGTCGATTAGTAGTAGACAAACATAATATTGAAGAAAAAACTGTTCAAAATTTCGCAATAAATAACAAACTCGCGGTAAACTTGAAAGGCGATTCAAATTTAACTACCCAAAAGTCAAGCGGTAATGAAAATTCTGTGAAGGGAATACAAACTAGAAATACAACGAAAATCCAAAATTTACCTTTGGATATGAAGCCAAATGCTACTGAACCGGAAATATTAGAAGCATGCAAATCTGTGCCGCGTAAAAATAGTTTGCCTTCGTCACAATCATATATAAACATTAAGACAAAGAATACTGCTGCCAACACGGGAACACAACCTTTACAGCCCCCTGCAGTACCTGCTTCTTGGCTAACGTCAAAACCGGTAGCTTCAACAAGCAATCCACCACCTCCGCCTCAAATATTTATACAGAGAGAAGAGAACATCAAAACTAAAACAGAAGTGAATTCAGTCCACAAAACGCAGCAGCAATCGAAAAAAGAAAACGAATTTTCGACGTCGATAGTCCAACCTCAACCATCTTGCTCATACATGCAACCTCAGGCTGCTGCGACATCTCAAATATCACAGCCCAATCCTGAAAAACTGAAACCAAAAGAAGTAGAGCTGTTGTCGGACGGCTACTCCAGTTTCATTAACCGTTTAACGAGACGAGGTCCCTCTGAAAAATCCGACACCGCAGTTGATTCTAAACTGACGATACCGCGATCTCGTTTTAATGATAACTTTTCCAATAACACTTCATCACTTTCTAATTTCCGTCGTTACGATAATAATAATGGCCACATATTACCATATTCATCGTTGACTTCAATGGCGACTACACCTAGTTCTAGGAAATTGAATGACGACCGTGCCTACTCCACTTACTTGGGAACAACAAAATCTAGAATTGACACTTCACCATTGCGTTCTACGTCCGGTATTACCACTGTCAGTCGTAGTGACTCATTCCGCAGAGCCCAAATGAAAGATAAATCATCCCCGTATACAAAAAGGTATCCTCTAAAAGAAAACAACAACAACATTGAACAAACATTATCATTGGGTAGTACTCGCAGTCGTTTAGAAGATAAATATTCTTCTGTTTTGGACCGAATAGCAAGTCAAAAGAAGGAAAGAGCTAGAAAAGATAAAGAACATGAAAAAACATTAGAACCAGAACCTGCTCTCCCGAGAGGTTTAATGAGAAGTTTGACGACGGCCGTTTTTGGAGAACATACTTTTAAAAGGAATAATTATTCTCGCGAAAAGACTAGGGACAAAACTCCTTACAGAAATGCGACTGATCGACGATTATCCAGTCATAAACAAAAAGATAAAGATGAATATAAGAATGGCTTCGAAGTACTGCAAAAGGATCACCATTTCGGTAAGGACCGTGATAGTGTATACAGAAGACATCAACGACGTTCATTGAGGGCTGAGAAAAGCGAAAATAGCGAAAGAAAAACCACAAAGATGACTTTGAGACCAATAGACATAGACCTCCAAACTAGCAATCGAGATCTTATTTCTCCGTTAGCCATAAAAGAAGCTATCTCTAAGTCTAAAATTACAAAAACGCCGGCTTCGTCTCCGACGCGAGATTCGGGTAGACAGAAACAAATATATTTTCCGTCCAGTGACGAAGATGACGATAAAACCCCTGTTGGAGATCTGGTACTGACCGATCGTGAAACGAGACGCAAAGAAATTCAGGGATTGATAATGAAGTATGCGCATTTAGACGAAATGTACGATCGCATTGGAGATAAAAATGAAGTGACGAACGACACGAGTGCCATACGAAAACCGGAGCCCTTAGCTGTTGGAGACGTAGTAGCATTGCCGCCGGAGCTGCGCAGTCGGCATCGTCCCCAGAGACCTCGCCACCAGACGCGGCGCGCGGCAACGCCGCCTAGCTCCCGGGCACGCTCCTCCGTCAAGGACGACAAGGACGGACATCTGGTCTACTGGCCCGGCTATGTCATGGGAGCGAGATACAAAATCATCGACACGCTCGGCGAGGGCACCTTCGGCAAAGTCGTCGAGGTGAAGGATTTAGAGCTGGAGCACAGAATGGCTCTGAAGATAATCAAAAACGTCGAGAAGTACAGAGAGGCTGCCAAACTTGAGATTAACGTATTAGAGAAATTAGCTGACGTCGATCCGGATTGTAAGAATTTGTGCGTGAAGATGTTGGACTGGTTTGAGTACCACGGTCACATGTGCATCGCGTTTGAAATGCTCGGTCAAAGTGTATTTGACTTCCTGAAAGACAACAACTACCAGCCGTACCCGCTGGAGCAGGTGCGCCACATCTCGTACCAGCTCGTGTACAGCGTGATGTTCCTGCACGACAACAAACTGACGCACACCGATCTCAAACCTGAAAATATATTATTCGTTGACAGCGATTACGAGGTCGTCAGCGTCTACACTAGTTCTAAGAAGACACATGACTTAAGACGCGTGAAGCGAAGCGATGTTAGACTGATAGACTTCGGCAGCGCCACCTTCGACCACGAGCACCACAGCACCATCGTCTCCACCAGACACTACCGGGCGCCAGAAGTCATCCTGGAGCTGGGCTGGTCGCAGCCGTGCGACGTGTGGTCGATAGGCTGCATCATGTTCGAGCTGTACCTCGGGATCACGCTCTTCCAGACACACGACAACAGGGAGCACCTCGCTATGATGGAGAGGATCCTGGGACCCATACCGTACAGAATGGCGCGGAAAACTAGAACAAAATATTTCTATCATGGAAAGTTAGATTGGGAAGAAAAATCGTCTGCTGGCAGATACGTCAGAGAAAATTGTAAACCATTATTGAGGTACTTACTGAACAACAACGAGGAGGCGCGTCAGCTGTTCGACCTGATCGCGCGCATGCTGGAGTACGAGCCCTCGCAGCGCGTGACCCTGCGCGACGCGCTCAAGCACCCCTTCTTCAACAAGCTGCCGCCGCACCAGAGGCTCGGCAATGAACGCGCGCGGTCGCACTCGTTGAGTCGGTGA
Protein
MNVPNGHITDAHPLHTGGGDTIAMNLLRVLLLSSGPPPSLPAVVFLPSDVLHVDGTFNVTSLQQKPDNVNDLQEINNVGVPTYEQNHNDQIEDCLLNNDEIPANVFLRRTHSFDISDTATTDLENFIDLGTLRQRRSEPDLSKYGLFVEPVVTLECEPLQRSLVLNNPFYDNSHAYDQMQLSNMLMLPENYLAFEDSFMSAWDYKPNIIMDRVNNNEIFYDGVPLIPSNDPWSVYNNDNTELEFYSPHYGIPSGEQDGIEYMPLTDLDTIPQYMSLPGENLNNATIEAQSELINIDAPDLINSDLLTLKDPTHPISSNIVSSDKQVSNIDFCENRESSTETEELFNADISNDVTSSLAFVPSSKSSQRPDCSDNTSDDTSPCSTDYHEASALDLVQSLDEISSCDSSNFSQSRDISPVNNQLTKTNENKDYENNVKQCLTKEQLETNINETQQIQQELIDKLIPILNINNISTEDLNLCGLSYNKKLNINVNEESEEQKIKFAANSTQGSNVNSIIGNVNNDVLAEPLTSESSAESSLRINTDDVSSSEKNVECETPKASTSVIKSTKETKHINTESNHQNSEPSEYNNEVSCRLVVDKHNIEEKTVQNFAINNKLAVNLKGDSNLTTQKSSGNENSVKGIQTRNTTKIQNLPLDMKPNATEPEILEACKSVPRKNSLPSSQSYINIKTKNTAANTGTQPLQPPAVPASWLTSKPVASTSNPPPPPQIFIQREENIKTKTEVNSVHKTQQQSKKENEFSTSIVQPQPSCSYMQPQAAATSQISQPNPEKLKPKEVELLSDGYSSFINRLTRRGPSEKSDTAVDSKLTIPRSRFNDNFSNNTSSLSNFRRYDNNNGHILPYSSLTSMATTPSSRKLNDDRAYSTYLGTTKSRIDTSPLRSTSGITTVSRSDSFRRAQMKDKSSPYTKRYPLKENNNNIEQTLSLGSTRSRLEDKYSSVLDRIASQKKERARKDKEHEKTLEPEPALPRGLMRSLTTAVFGEHTFKRNNYSREKTRDKTPYRNATDRRLSSHKQKDKDEYKNGFEVLQKDHHFGKDRDSVYRRHQRRSLRAEKSENSERKTTKMTLRPIDIDLQTSNRDLISPLAIKEAISKSKITKTPASSPTRDSGRQKQIYFPSSDEDDDKTPVGDLVLTDRETRRKEIQGLIMKYAHLDEMYDRIGDKNEVTNDTSAIRKPEPLAVGDVVALPPELRSRHRPQRPRHQTRRAATPPSSRARSSVKDDKDGHLVYWPGYVMGARYKIIDTLGEGTFGKVVEVKDLELEHRMALKIIKNVEKYREAAKLEINVLEKLADVDPDCKNLCVKMLDWFEYHGHMCIAFEMLGQSVFDFLKDNNYQPYPLEQVRHISYQLVYSVMFLHDNKLTHTDLKPENILFVDSDYEVVSVYTSSKKTHDLRRVKRSDVRLIDFGSATFDHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIMFELYLGITLFQTHDNREHLAMMERILGPIPYRMARKTRTKYFYHGKLDWEEKSSAGRYVRENCKPLLRYLLNNNEEARQLFDLIARMLEYEPSQRVTLRDALKHPFFNKLPPHQRLGNERARSHSLSR

Summary

Uniprot
H9JAB6  
Pubmed
19121390   
EMBL
BABH01009001   
Proteomes
UP000005204   
PRIDE
H9JAB6   
Pfam
PF00069   Pkinase
Interpro
IPR008271   Ser/Thr_kinase_AS        + More
IPR011009   Kinase-like_dom_sf       
IPR017441   Protein_kinase_ATP_BS       
IPR000719   Prot_kinase_dom       
SUPFAM
SSF56112   SSF56112       
ProteinModelPortal
H9JAB6  
PDB
5UNP     E-value=1.68196e-145,     Score=1329

Ontologies

KEGG
101737313    K08823 CDC-like kinase [EC:2.7.12.1] | (RefSeq) serine/threonine-protein kinase Doa
GO
GO:0005524   GO:0004672   GO:0006468   GO:0005737   GO:0006432   GO:0000287   GO:0003723   GO:0006270   GO:0042555   GO:0048384  

Topology

Length:
1594
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.21979
Exp number, first 60 AAs:
0.08107
Total prob of N-in:
0.00376
outside
1  -  1594
 
 

Population Genetic Test Statistics

Pi
209.606958
Theta
190.777888
Tajima's D
0.20228
CLR
0.137016
CSRT
0.429928503574821
Interpretation
Uncertain
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