SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO03296
Pre Gene Modal
BGIBMGA006427
Annotation
PREDICTED:_mod(mdg4)-heS00531_isoform_X2_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 2.412
 

Sequence

CDS
ATGTTTGCAGCACGTTTCATCCGTGCCGGTAAGGGGAGACTCCTGCTGCACCGAGGTTACACTTTCCGCTTGAAGAACAACCTGGCTCATGGTCGTAAACAATGGTATTGCTCGTCACGTCTTACCTCCCGTTGCCTCGCCGACGTGAACACAGAAGGACCCGAGGGCCACGAACGCATCGTTCGCTCCCGCTATGCCCACAACCACGCACCCCCTAATGTACGTCGTTTCGCTGACGGCCGGTATGTCGTTCGCACTCCACACCAGAGCGGCCACCGGGCAAATGCTCCACTCGACCCTCATCATCAGCTGCTTCAGTTGCAGCATGCACTGGCTCTTTATGCGGCTCATGCAAACGCTACCGCCACCGCCAATGCAACTGCTAATGCGACTGCTGCGGTCTCGGCCTCTACAGGGACTGCGCCTCAACCATCTCCGAGCGCTTTACCACCTCCAGCGCAGCACACGAATGCGGCTAAACCTTTACTTGTTGACACTCCATGCAACGAGGAGGATTAA
Protein
MFAARFIRAGKGRLLLHRGYTFRLKNNLAHGRKQWYCSSRLTSRCLADVNTEGPEGHERIVRSRYAHNHAPPNVRRFADGRYVVRTPHQSGHRANAPLDPHHQLLQLQHALALYAAHANATATANATANATAAVSASTGTAPQPSPSALPPPAQHTNAAKPLLVDTPCNEED

Summary

Pfam
PF04500   FLYWCH        + More
PF00651   BTB
Interpro
IPR007588   Znf_FLYWCH        + More
IPR011333   SKP1/BTB/POZ_sf       
IPR000210   BTB/POZ_dom       
SUPFAM
SSF54695   SSF54695       

Ontologies

Topology

Length:
172
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.01122
Exp number, first 60 AAs:
0
Total prob of N-in:
0.09002
outside
1  -  172
 
 

Population Genetic Test Statistics

Pi
37.678366
Theta
66.365687
Tajima's D
-1.15469
CLR
1422.182169
CSRT
0.107744612769362
Interpretation
Uncertain
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