Gene

KWMTBOMO03285

Pre Gene Modal

BGIBMGA006441

Annotation

PREDICTED:_mod(mdg4)-heS00531_isoform_X1_[Bombyx_mori]

Location

Bomo_Chr6(-):3281450-3299065      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 3.634

CDS

ATGATACTAATGCGTGTTATAGATATTGGCTGTTTAAGGGTCAGTTTCTTTGATTCTGTCCGTAACGATGATAAATCGGAATTGTCCACGGTCATATTTCAAGAGGAAGGGGCATTTGATGATAAAGAAGTAACTTTTATAAAATTACGCACAGGAATTGAATTATTGCAGTACAATGGATACAGATATAGGAAGGCATATAAAGCTAAGAGCGGTACTAGATGGGTCTGTTCTGTTGATAAAAACTGTAATTCGTTCCTGTATGTCAATGATGATTCAAAAATTATGATGACCTGTGAACAACATGATCATCCACAATCTGAAAGCTTAGAAGCGGACGAAAATGATGCACAAAAAGCTACATCCTTAGAAGAGTCGTCAACAGTGATGACAGAGGAAGAAGAAGGATTCGATGATAATGAAGTGTTATTCATTAAGTCCCGTAAAGGAAAAGACATGTTACAATACAATGGCTTCAGATACAGGAAGGCATATAAAGCTAAGAGCGGTACCAGATGGGTGTGTTCGCTGGACAAGAATTGCAATTCGTTCTTGTACCTTAATGATGAATTCAAAATTGTGATGGCCTGTGAACAACACGATCATCCCGAGCCGCACAGATTCGAAGACATCGACAGCGAGCAGAACGATACAGCATTAGTGATCACGTCTAGGAAAGGCAAAGAAATGCTTTTATTCAGACAGTACACTTATCGGAAACAGTACATCAAAGGGGATCGTACTAGATGGGTCTGTTCTACTATAAAGAACTGCCGCGCATGCGTCTTTACAGACACATCTAATTACATCACTTCAGCTTACGAAGAACATTGCCACGAGCCTCCGAAGTATTATCTCAAGCCGCAGAATGTGATTGAAGCGCTTCGAGAACCGCTCATAATAGAAGCTGATTAA

Protein

MILMRVIDIGCLRVSFFDSVRNDDKSELSTVIFQEEGAFDDKEVTFIKLRTGIELLQYNGYRYRKAYKAKSGTRWVCSVDKNCNSFLYVNDDSKIMMTCEQHDHPQSESLEADENDAQKATSLEESSTVMTEEEEGFDDNEVLFIKSRKGKDMLQYNGFRYRKAYKAKSGTRWVCSLDKNCNSFLYLNDEFKIVMACEQHDHPEPHRFEDIDSEQNDTALVITSRKGKEMLLFRQYTYRKQYIKGDRTRWVCSTIKNCRACVFTDTSNYITSAYEEHCHEPPKYYLKPQNVIEALREPLIIEAD

Uniprot

A0A194Q1L0   A0A0L7LNB4   H9JAA2   A0A2H1V080   A0A194Q363   A0A0L7KX54   + More
A0A2H1W5U7   A0A212EXR1   A0A2H1V8D5   A0A2H1VBD0   A0A2H1VPW3   A0A2H1V0M4   A0A0L7LBH7   A0A0L7LGB2   A0A0N1IH21   A0A2H1VQT2   A0A0L7KWL4   A0A2H1W2V8   A0A212EXR9   A0A2H1VGK0   A0A2H1V1N9   A0A2W1BPU6   B0W3A5   A0A2H1W263   A0A2H1WBD9   A0A194Q7P4   A0A182PAI4   A0A182VB15   A0A2W1BRQ8   A0A182TT45   A0A182X8U4   A0A182ID26   A0A1S3WVC4   A0A1S3WV77   A7UT32   A0A182G8X4   A0A023EVD6   A0A194Q270   A0A0L7LD17   Q17CB7   A0A182K7D5   A0A0L7LG90   A0A2H1WPG2   A0A182URS7   A0A2H1VPS2   A0A0N1PFZ2   A0A0L7KR02   A0A1S3WVF7   A0A0N1I724   A0A0L7L059   A0A182QM19  

Pubmed

26354079    26227816    19121390    22118469    28756777    12364791    + More
26483478    24945155    17510324   

EMBL

KQ459579    KPI99436.1    JTDY01000469    KOB77038.1    BABH01008907    BABH01008908    + More
BABH01008909    ODYU01000089    SOQ34263.1    KPI99444.1    JTDY01004880    KOB67641.1    ODYU01006528    SOQ48461.1    AGBW02011697    OWR46280.1    ODYU01001206    SOQ37110.1    ODYU01001625    SOQ38111.1    ODYU01003460    SOQ42274.1    ODYU01000134    SOQ34400.1    JTDY01001805    KOB72838.1    JTDY01001243    KOB74424.1    KQ460650    KPJ13109.1    ODYU01003713    SOQ42832.1    JTDY01005028    KOB67456.1    ODYU01005862    SOQ47162.1    AGBW02011698    OWR46261.1    ODYU01002462    SOQ39983.1    SOQ34262.1    KZ149939    PZC77008.1    DS231831    EDS31248.1    ODYU01005863    SOQ47179.1    ODYU01007417    SOQ50162.1    KPI99425.1    PZC77001.1    APCN01004974    AAAB01008898    EDO64130.2    JXUM01048515    JXUM01048516    JXUM01048517    JXUM01048518    JXUM01048519    KQ561566    KXJ78146.1    GAPW01000178    JAC13420.1    KPI99433.1    JTDY01001612    KOB73362.1    CH477310    EAT43958.1    KOB74425.1    ODYU01010091    SOQ54953.1    SOQ42833.1    KPJ13106.1    JTDY01006764    KOB65708.1    KPJ13089.1    JTDY01004064    KOB68644.1    AXCN02001190   

Proteomes

UP000053268    UP000037510    UP000005204    UP000007151    UP000053240    UP000002320    + More
UP000075885    UP000075903    UP000075902    UP000076407    UP000075840    UP000079721    UP000007062    UP000069940    UP000249989    UP000008820    UP000075881    UP000075886   

PRIDE

H9JAA2   

Pfam

PF04500   FLYWCH        + More
PF07776   zf-AD
PF15423   FLYWCH_N
PF02892   zf-BED

Interpro

IPR007588   Znf_FLYWCH        + More
IPR040312   FWCH1/FWCH2       
IPR012934   Znf_AD       
IPR026305   NELF-A       
IPR029279   FLYWCH_N       
IPR013087   Znf_C2H2_type       
IPR003656   Znf_BED       
IPR036236   Znf_C2H2_sf       

SUPFAM

SSF57667   SSF57667       

ProteinModelPortal

A0A194Q1L0   A0A0L7LNB4   H9JAA2   A0A2H1V080   A0A194Q363   A0A0L7KX54   + More
A0A2H1W5U7   A0A212EXR1   A0A2H1V8D5   A0A2H1VBD0   A0A2H1VPW3   A0A2H1V0M4   A0A0L7LBH7   A0A0L7LGB2   A0A0N1IH21   A0A2H1VQT2   A0A0L7KWL4   A0A2H1W2V8   A0A212EXR9   A0A2H1VGK0   A0A2H1V1N9   A0A2W1BPU6   B0W3A5   A0A2H1W263   A0A2H1WBD9   A0A194Q7P4   A0A182PAI4   A0A182VB15   A0A2W1BRQ8   A0A182TT45   A0A182X8U4   A0A182ID26   A0A1S3WVC4   A0A1S3WV77   A7UT32   A0A182G8X4   A0A023EVD6   A0A194Q270   A0A0L7LD17   Q17CB7   A0A182K7D5   A0A0L7LG90   A0A2H1WPG2   A0A182URS7   A0A2H1VPS2   A0A0N1PFZ2   A0A0L7KR02   A0A1S3WVF7   A0A0N1I724   A0A0L7L059   A0A182QM19  

KEGG

NA   

GO

GO:0016021   GO:0005634   GO:0008270   GO:0003677  

PANTHER

PTHR31665   PTHR13328:SF4  

Length:

304

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.01380

outside

1  -  304

 

 

Pi

255.196251

Theta

224.835304

Tajima's D

0.395997

CLR

0.037085

CSRT

0.483925803709815

Interpretation

Uncertain