SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO03271  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA014558
Annotation
PREDICTED:_CDK5_regulatory_subunit-associated_protein_3_[Bombyx_mori]
Location in the cell
Cytoplasmic   Reliability : 3.818
 

Sequence

CDS
ATGGATGAAAGCAACATCCCCATCGATATAAACATAGGAAAGCTTCAAGACTGGTTGATCAGTCGTAGGCACGTCTCTAAAGATTGGCAGAAGAATGTCATAGCTGTGAGAGAGAAGATCAACAATGCCATCCAAGACATGCCGGCTCACCAAGACATAGCTGCTTTACTCTCAGGCAGCTACATAAATTATTTCCACTGCTTAAAAATCATTGAAATACTAAAAGAAACTGAGGCTGATACTAAAAATTTGTTCGGGAGATACGGGTCACAGAGGATGAAGGACTGGCAGGATGTTGTGAGGAACTATGAGAAGGAGAACTTGTATTTAGCAGAGGCAGCACAGATGCTGGTCAGGAATATTAGTTATGAGATTCCAGGGTTGAAGAGGCAGATTGCCAAAGAGGAACAGGCACAAGCGGACTTTGAAAAGAAGCATGCAGACTATCTAAAGAATGAAGCATCAAGTAAATCAGAGTTTCTGGCTTTGTGTAAACAACTTGGTATCCAAGGTGAGAAGATCAAGAGAGAATTAGTGGCGAAACTGCAGGAGCTGCCTGAGATATATGACCAAATAGGGAAATCACTAAAACCACTCCAGCCAGGTATAGAGTTATACAATGCATTCACAAAGTATATCCTCGGTGAGGATTCTCCAGAAGCTTTACCAATTTTGCAATATGTGATTATTCACGGCAATACTACAGTGTATGAATGGAGTTACGGAGAACCTCCTTTGAGCTTGGAGCCAGATCCTATACATATCGAATTAGATGATGACGAAGAACAGGCTTCTGGAGATCAGATAGATTTTGGGGACAACAATGATATAGATTTTTCTTCTATCGATGCTTCAGGCGCAGGGATTGACTTCGGAGATGGGGATGGGGCTGCTGAAATAGACTGGGGCAATATTGATATTGCTTCGGCCGATGAAAATAGTCTTTTGGCTGATATAGAAGCTGTGTCTTTGGAAGGGGCGGGGATAGTAATAGAGGAGCAAGGGATGACCGGTGGAGTTGCGAGGGGCAAAGATGCTCTGACGTTATTGGACAACCCCTCTACAAGGAACCAGTTCATCGATCAACTCGTTGAGCTCGAGTCGTTCCTGAAGATGCGCGTGTACGAGACGACGAGTGCGGCGGAGTCCCACACGCTGTCGCTGCTGCAGCAGCTGCCGGCGGAGAGCGAGCCGGCGCTGCGGGGCATGCTGGGCGCCGTGCAGCGCGCCGCCGCCGCCCTCGCCGCGCCCGACCTCGCGCACCTGCACAACGTCAAGCACTCGCCCAGGTACGTGGACGTGCTGACGGCTCAGCTAAAGCAGAAGCTGGTACTGTGCGAGAAGCTGTCGAAGCTGGCGGCGCGAGCGGCCGAACAGCGAACGGCGGCGAACGTTCGCGCCGCCGAACTAAGGCCGGTGCTCTCTAAAATCATAGAGAGAACTAAACAGTTGCAAGCGCAGATCGAAAGCGACATATCGAAGAAGTACAAGGGCAGGCCGGTCAACATTATCGGCGGTGTTAAATTCTTGTAG
Protein
MDESNIPIDINIGKLQDWLISRRHVSKDWQKNVIAVREKINNAIQDMPAHQDIAALLSGSYINYFHCLKIIEILKETEADTKNLFGRYGSQRMKDWQDVVRNYEKENLYLAEAAQMLVRNISYEIPGLKRQIAKEEQAQADFEKKHADYLKNEASSKSEFLALCKQLGIQGEKIKRELVAKLQELPEIYDQIGKSLKPLQPGIELYNAFTKYILGEDSPEALPILQYVIIHGNTTVYEWSYGEPPLSLEPDPIHIELDDDEEQASGDQIDFGDNNDIDFSSIDASGAGIDFGDGDGAAEIDWGNIDIASADENSLLADIEAVSLEGAGIVIEEQGMTGGVARGKDALTLLDNPSTRNQFIDQLVELESFLKMRVYETTSAAESHTLSLLQQLPAESEPALRGMLGAVQRAAAALAAPDLAHLHNVKHSPRYVDVLTAQLKQKLVLCEKLSKLAARAAEQRTAANVRAAELRPVLSKIIERTKQLQAQIESDISKKYKGRPVNIIGGVKFL

Summary

EMBL
KZ150268    PZC71692.1    ODYU01011560    SOQ57376.1    KQ460650    KPJ13120.1    + More
AGBW02013025    OWR44074.1    BABH01043417    BABH01043418    KQ459579    KPI99454.1    LJIG01016080    KRT81674.1    KQ971328    EFA00941.1    NEVH01020866    PNF20855.1    KQ434829    KZC07753.1    KQ760539    OAD59986.1    GEZM01036470    JAV82670.1    KZ288186    PBC34763.1    AAZX01001967    LBMM01000386    KMQ98640.1    KQ435758    KOX75784.1    NNAY01002871    OXU20405.1    APGK01034486    APGK01034487    KB740914    ENN78335.1    KB631869    ERL86842.1    GECZ01029069    JAS40700.1    GFDF01006598    JAV07486.1    AJVK01013092    GL887696    EGI70377.1    DS231821    EDS45005.1    CH477240    EAT46431.1    GECU01030010    JAS77696.1    GEBQ01020902    JAT19075.1    JXUM01109896    KQ565364    KXJ71049.1    KK107453    EZA50664.1    GGFM01003709    MBW24460.1    GANO01000949    JAB58922.1    GFDL01010155    JAV24890.1    GFDL01010072    JAV24973.1    GGFJ01004567    MBW53708.1    GGFJ01004566    MBW53707.1    KQ978737    KYN28904.1    GGFJ01004565    MBW53706.1    QOIP01000004    RLU23747.1    GDIP01149944    GDIQ01034959    JAJ73458.1    JAN59778.1    AJWK01025802    AJWK01025803    KQ414666    KOC65049.1    ADMH02002127    ETN58631.1    GL732529    EFX86797.1    GEDC01024922    JAS12376.1    AXCN02000692    GL447257    EFN86672.1    ATLV01023440    KE525343    KFB49189.1    APCN01001736    AAAB01008980    EAA14226.4    GDIP01009038    JAM94677.1    CVRI01000004    CRK87443.1    GECU01021892    JAS85814.1    GGFK01004513    MBW37834.1    AXCM01001183    KK853452    KDR07538.1    GDIQ01005594    JAN89143.1    GDAI01000684    JAI16919.1    UFQT01000176    SSX21160.1    GEFH01004595    JAP63986.1    GDIQ01088840    JAN05897.1    GEDV01005568    JAP82989.1    KQ982543    KYQ55393.1    GDIQ01167069    JAK84656.1    KQ981505    KYN40920.1    JO842704    AEO34321.1    GAPW01001235    JAC12363.1    GFPF01005038    MAA16184.1    GL438827    EFN68232.1    KQ977306    KYN03614.1    GFAC01002190    JAT96998.1    GFDF01006832    JAV07252.1    GACK01010361    JAA54673.1    GEFM01003157    JAP72639.1    GANP01000939    JAB83529.1    GDRN01104755    GDRN01104753    JAI57863.1    CCAG010006799    GFWV01021331    MAA46059.1    EZ422124    ADD18323.1   
Pfam
PF05600   DUF773        + More
PF01105   EMP24_GP25L
Interpro
IPR008491   CDK5RAP3        + More
IPR009038   GOLD_dom       
IPR036598   GOLD_dom_sf       
SUPFAM
SSF101576   SSF101576       

Ontologies

Topology

Length:
510
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00339
Exp number, first 60 AAs:
0.0013
Total prob of N-in:
0.00131
outside
1  -  510
 
 

Population Genetic Test Statistics

Pi
337.450159
Theta
173.171113
Tajima's D
2.699277
CLR
0.489625
CSRT
0.959302034898255
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
26822097 IQEIPEIYDQIGK 100.00 0.008
26822097 IIEIIKETEADTK 100.00 0.012
26280517 QIAEPSHWDSINSPIIQDEGDGKTIK 100.00 0.012
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