Gene
KWMTBOMO03268
Pre Gene Modal
BGIBMGA013607
Annotation
PREDICTED:_zinc_finger_BED_domain-containing_protein_4_[Bombyx_mori]
Location in the cell
PlasmaMembrane Reliability : 2.097
Sequence
CDS
ATGCTCATACAGACAAAAATAATGTACGTGAAAAAAATGATCTGTAAATTTAGAAGTGTTTTAAGGGTAGTCGTATTGTTTTTATTGTTCGTGAATGTAAGTGCATGTAACTTAGGATTGGACTTCCTAGCAGAAGATTTACTAGCAGCCTTGGGTCCAATATTGGCCTCTACATCAAATATATTTGGTGATATATTTAAAACACATTCCATAGAAGAAGAAGACGGCCCTATTACTCCTGATCTGATCACCGAGTGTTTGAAATGTGGTCGCGAGCTGGCCCGCAGTTCGAAAGAGCGCGGGAATAAGCTCGTGAAGAATGGTATCAACCTGGAGGCGTATTCACCATCGCTGCTGCATTTCTTCTCCCCTTCTTACTCAGCTGATATAAATAACGCAGTGGAAGTGTCCCATGAGATTCTTAGTTCAACGAAAGTACTTCAGACGAAGTTATGCGCGTGCAGTGATGTCACGCCAAACACGTTTATGGCATTCTTGGAGAACCAGGTTATTAAAGTGCAAGATCCTACCCTCGGCATGCCCTCAACCATTATCTGCGGGAACGCCAAGTACCGCACAACAGATGGCATTTGTAACAACGAGCGACACCCTTACTGGGGCAGGAAGGGCGCGTGTTTTACTAGAATAGCTAACCCTAAATACGGCGATGATAATGCTGCCAATATACAGAGAGCCATTTCTAACATCGGTTGGAAGCATTATGGATGTTATGGTCATACTTTGAATTTGATTGTGCAAAATGCTATTTCTAATGATGAGACACTACAGAATTTATTAGAGAAAGTTAAAAAAATTGTACGCTTTTTTAAAAGTAGCAGCACTGCCTTGGAACAACTTTTAAAAGCCCAAACGAATGACCAGCCAAATTGCATCCCAAAGCGCTTAATTCAGGAAGTTCCGACATGCTGGAACTCCACCTTTCAGATGGTTAGGCGATTCGTTGATCTCGAACAGTGCCTCAGATCGACAGTGGCAATATTAAAAAAAGATTTACCGATAATTACAAATGATGAGTGGTTGTTGCTTGCCGAAATAGCAAAGATATTAAAGCCCTTTCATGAAGCAACTGAATCAATGAGCGGTGAAAAATATATGACCGCTAGCTCAGTCATAGTCATGACACGATGCCTGACAACAGCATGCGACAAATTATTAATAGAAGATTATTGTGAGCTTTCGAAGGAAATAATTTATAAACTAAGATCAGGACTAGTAATGAGGTTCACAAATGTTGAAAGAAGTGAAACATTTTCTGTGTGTACATTCCTAGATCCAAGGTACAAACTGGCCGTATTTTCTGACGAAAATGAAGCAAAAAACACCAAAAAACGTGTGCAAGATCTTTTGATGGGAATCATACTACAGGAGAATCAGGAGTCTGCACAAGATCAGGTTCATGCCTCGATTTCCGAACACCACGAAGCCGATAAATTCTCTCCGTGGGCCATCCTTAGTGAAATAGTTGGTCAAAAACAGACCGTTGGAACTCCACTATCAAAAGCCATAAAGGAAATTGACACATACCTAAAAGATGATGTCTTACCCGTTTTCAAGGGGACGACTTGGAGTTGTCCACTGGAATGGTGGCGTAAACATAAATTCACATATCCTAATCTAGCGAAACTTTTTAAAAGATATGGCAATATCATGGCAACGTCGGTTCAATGCGAGAGAATTTTTAGTAAAACTGGATGGATTATAAATGATCGACGAACTCGGCTCTCATCATCAAAAGTGAAGCAGCTTACATTTTTAAATGTAAACCTTTGTACAAAAAGATTTGAATTATAA
Protein
MLIQTKIMYVKKMICKFRSVLRVVVLFLLFVNVSACNLGLDFLAEDLLAALGPILASTSNIFGDIFKTHSIEEEDGPITPDLITECLKCGRELARSSKERGNKLVKNGINLEAYSPSLLHFFSPSYSADINNAVEVSHEILSSTKVLQTKLCACSDVTPNTFMAFLENQVIKVQDPTLGMPSTIICGNAKYRTTDGICNNERHPYWGRKGACFTRIANPKYGDDNAANIQRAISNIGWKHYGCYGHTLNLIVQNAISNDETLQNLLEKVKKIVRFFKSSSTALEQLLKAQTNDQPNCIPKRLIQEVPTCWNSTFQMVRRFVDLEQCLRSTVAILKKDLPIITNDEWLLLAEIAKILKPFHEATESMSGEKYMTASSVIVMTRCLTTACDKLLIEDYCELSKEIIYKLRSGLVMRFTNVERSETFSVCTFLDPRYKLAVFSDENEAKNTKKRVQDLLMGIILQENQESAQDQVHASISEHHEADKFSPWAILSEIVGQKQTVGTPLSKAIKEIDTYLKDDVLPVFKGTTWSCPLEWWRKHKFTYPNLAKLFKRYGNIMATSVQCERIFSKTGWIINDRRTRLSSSKVKQLTFLNVNLCTKRFEL
Summary
Similarity
Belongs to the sterol desaturase family.
Uniprot
EMBL
Proteomes
Interpro
Gene 3D
ProteinModelPortal
PDB
6DX0
E-value=2.27093e-05,
Score=116
Ontologies
GO
Topology
Length:
603
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
22.5817
Exp number, first 60 AAs:
22.57999
Total prob of N-in:
0.99896
POSSIBLE N-term signal
sequence
inside
1 - 19
TMhelix
20 - 42
outside
43 - 603
Population Genetic Test Statistics
Pi
30.602347
Theta
198.732014
Tajima's D
0.727991
CLR
0.19105
CSRT
0.583920803959802
Interpretation
Uncertain
