Gene

KWMTBOMO03264  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA013605

Annotation

eukaryotic_initiation_factor_4E-2_[Bombyx_mori]

Location

Bomo_Chr6(+):2594587-2597749      View in EpiBrowser

Location in the cell

Mitochondrial   Reliability : 2.008 Nuclear   Reliability : 2.138

CDS

ATGACTGAAAGGAAAATGTGCAAATTCTACAATTTAAACGTGCCCGAGCGACGGTCTGGTGAGGCCCAGGGAATAGCGCAGAACCACGGCAACAACGAAGATGATGATAGGAATCCCGACGATCCGTTGGTTCCTTACGTGCCGCCGCACGAACACAAGCTGGAATATAGCTACTGGATGTGGTTTTCAAGGCGGCCCGCCCGAGATCTTACCACAACACCCACTGGTTACGGCCAGGCGTTACGTTTGGTGGGTCGGGTGGGCAGTGTGGAACAATGGTGGGGTCTATATACACATCTGGCTAGACCTTCAGAGTTACCTCCACTCTCTGACCTTCATCTTTTTAAGTTGGGTATTAAGCCAATGTGGGAAGATCCGGCCAATGTCAATGGAGGGAAGTGGGTGGTCAGATTACGTAAAACACAGACGGGTCGTGCATGGGAAGACTTATGTATGGCAATGCTGGGCGAACAATTTATGGTTGGACCAGAGCTGTGCGGTGTGGTACTCTCAGTACGATTTCAGGACGACCACCTGGCAGTGTGGCACCGGACGGCGTCGGACACGGCGGCGGCGCATCGCGTGCGGGACGCCCTGCGCCGCATCCTGCAGCTGCCCGCGTCCGTGCCCATCGAGTACAAGGCGCACGGAGACTGCCTGCGCGCCACGGCCTCGCGGGCCCCGGACCACGAGCACAGCGAGCCCCCGCCCCGCTCGTAG

Protein

MTERKMCKFYNLNVPERRSGEAQGIAQNHGNNEDDDRNPDDPLVPYVPPHEHKLEYSYWMWFSRRPARDLTTTPTGYGQALRLVGRVGSVEQWWGLYTHLARPSELPPLSDLHLFKLGIKPMWEDPANVNGGKWVVRLRKTQTGRAWEDLCMAMLGEQFMVGPELCGVVLSVRFQDDHLAVWHRTASDTAAAHRVRDALRRILQLPASVPIEYKAHGDCLRATASRAPDHEHSEPPPRS

Similarity

Belongs to the eukaryotic initiation factor 4E family.

Uniprot

A1YVX3   A0A2A4JJN3   A0A2W1BL89   A0A2H1VPE5   I4DMP8   A0A0N0PCK4   + More
A0A212EMC8   B2DBL9   S4PB21   A0A194Q379   A0A0T6AY71   A0A1W4XG25   D6X3F1   A0A1Y1N7K8   A0A1S3DEC6   A0A0M5L6U1   A0A026X3M3   A0A1J1I0I9   E0VZB6   U4UNP7   A0A0V0G5I5   A0A069DPQ0   A0A023FAX9   A0A1B6IZY0   E2AL35   A0A1B6EQV0   A0A1B6G6S9   A0A1B6I3I5   A0A0P4VHS2   R4G3M1   A0A224XWI9   A0A161MN44   N6T847   A0A0L7RGG1   A0A088ANG5   A0A1L8DRR6   A0A0A9XJE7   A0A0A9XRQ6   A0A0A9XIF7   U5ES11   A0A158NSG3   A0A1B0CLU4   A0A195CSL9   A0A195FSV4   F4WFN0   A0A1S4FBL9   A0A1S4FBR0   Q178Q3   A0A151J4A6   J9HSK7   A0A151WI96   A0A2A3EBK9   E9JDA0   A0A154PF16   A0A1Q3G0F8   A0A067QKZ7   A0A195BL23   A0A182T633   A0A182VYL3   A0A182RNC7   A0A182MWZ4   A0A0P4WIT7   A0A2M3ZIZ9   A0A182F8D1   A0A2M4C0N4   A0A1B0GKU9   A0A0K8TKB6   W5JGH4   A0A182QQU2   A0A182VLR2   A0A182JX04   A0A182HU07   A0A182TI28   A0A182WRS2   Q7QD43   A0A2M4AVN0   A0A182P6L7   A0A2J7RT71   A0A182NG20   Q4V7K1   A0A182XWB3   A0A336MJN8   W8C055   Q28F16   E9HCX7   A0A1S3SBS6   B4JIH0   A0A0A1WT05   A0A3B0JQQ3   B5XEN3   B4MBZ3   A0A0K8TVW8   A0A034WIW4   C3YK25   A0A0Q9WY57   A0A0C9PLV0   Q298K7   B4NBN6  

Pubmed

28756777    22651552    26354079    22118469    18712529    23622113    + More
18362917    19820115    28004739    24508170    20566863    23537049    26334808    25474469    20798317    27129103    25401762    26823975    21347285    21719571    17510324    21282665    24845553    26369729    20920257    23761445    12364791    14747013    17210077    25244985    24495485    20431018    21292972    17994087    25830018    20433749    25348373    18563158    15632085   

EMBL

EF139225    ABL75550.1    NWSH01001169    PCG72277.1    KZ150071    PZC74057.1    + More
ODYU01003477    SOQ42322.1    AK402566    BAM19188.1    KQ460650    KPJ13125.1    AGBW02013858    OWR42611.1    AB264703    BAG30778.1    GAIX01006162    JAA86398.1    KQ459579    KPI99459.1    LJIG01022536    KRT80060.1    KQ971373    EEZ97757.2    GEZM01010675    JAV93924.1    KR075863    ALE20582.1    KK107013    EZA62910.1    CVRI01000021    CRK91905.1    DS235851    EEB18722.1    KB632379    ERL94103.1    GECL01002777    JAP03347.1    GBGD01002846    JAC86043.1    GBBI01000629    JAC18083.1    GECU01015223    JAS92483.1    GL440437    EFN65857.1    GECZ01029463    JAS40306.1    GECZ01011736    JAS58033.1    GECU01026210    JAS81496.1    GDKW01002413    JAI54182.1    ACPB03018330    ACPB03018331    GAHY01002085    JAA75425.1    GFTR01003913    JAW12513.1    GEMB01001368    JAS01788.1    APGK01040380    KB740979    ENN76409.1    KQ414596    KOC69945.1    GFDF01004906    JAV09178.1    GBHO01023841    GBHO01023838    GDHC01016428    JAG19763.1    JAG19766.1    JAQ02201.1    GBHO01023842    GBHO01023839    GBRD01002037    GDHC01002871    GDHC01000904    JAG19762.1    JAG19765.1    JAG63784.1    JAQ15758.1    JAQ17725.1    GBHO01023840    GBRD01011531    GDHC01004468    JAG19764.1    JAG54293.1    JAQ14161.1    GANO01003460    JAB56411.1    ADTU01024894    AJWK01017617    KQ977329    KYN03522.1    KQ981276    KYN43528.1    GL888120    EGI67007.1    CH477360    EAT42687.1    KQ980159    KYN17413.1    EJY57603.1    KQ983089    KYQ47554.1    KZ288292    PBC29163.1    GL771866    EFZ09124.1    KQ434878    KZC09820.1    GFDL01001761    JAV33284.1    KK853202    KDR09888.1    KQ976444    KYM86245.1    AXCM01001293    GDRN01086442    JAI61179.1    GGFM01007731    MBW28482.1    GGFJ01009407    MBW58548.1    AJWK01033700    GDAI01002836    JAI14767.1    ADMH02001252    ETN63462.1    AXCN02001200    APCN01000597    AAAB01008859    EAA07613.4    GGFK01011522    MBW44843.1    NEVH01000006    PNF44021.1    BC097863    AAH97863.1    UFQS01000415    UFQT01000415    UFQT01001255    SSX03736.1    SSX29681.1    GAMC01011611    JAB94944.1    AAMC01119170    AAMC01119171    AAMC01119172    BC121524    CR762226    AAI21525.1    CAJ81988.1    GL732621    EFX70445.1    CH916369    EDV93051.1    GBXI01012739    JAD01553.1    OUUW01000007    SPP82722.1    BT049502    BT125557    ACI69303.1    ADM16298.1    CH940656    EDW58614.2    GDHF01033707    JAI18607.1    GAKP01004685    JAC54267.1    GG666520    EEN59482.1    CH933806    KRG00943.1    GBYB01002068    GBYB01012322    JAG71835.1    JAG82089.1    CM000070    EAL27949.4    CH964232    EDW81200.2   

Proteomes

UP000218220    UP000053240    UP000007151    UP000053268    UP000192223    UP000007266    + More
UP000079169    UP000053097    UP000183832    UP000009046    UP000030742    UP000000311    UP000015103    UP000019118    UP000053825    UP000005203    UP000005205    UP000092461    UP000078542    UP000078541    UP000007755    UP000008820    UP000078492    UP000075809    UP000242457    UP000076502    UP000027135    UP000078540    UP000075901    UP000075920    UP000075900    UP000075883    UP000069272    UP000000673    UP000075886    UP000075903    UP000075881    UP000075840    UP000075902    UP000076407    UP000007062    UP000075885    UP000235965    UP000075884    UP000076408    UP000008143    UP000000305    UP000087266    UP000001070    UP000268350    UP000008792    UP000001554    UP000009192    UP000001819    UP000007798   

PRIDE

A1YVX3   

Pfam

PF01652   IF4E

Interpro

IPR001040   TIF_eIF_4E        + More
IPR023398   TIF_eIF4e-like       
IPR019770   TIF_eIF_4E_CS       

SUPFAM

SSF55418   SSF55418       

Gene 3D

3.30.760.10    

ProteinModelPortal

A1YVX3   A0A2A4JJN3   A0A2W1BL89   A0A2H1VPE5   I4DMP8   A0A0N0PCK4   + More
A0A212EMC8   B2DBL9   S4PB21   A0A194Q379   A0A0T6AY71   A0A1W4XG25   D6X3F1   A0A1Y1N7K8   A0A1S3DEC6   A0A0M5L6U1   A0A026X3M3   A0A1J1I0I9   E0VZB6   U4UNP7   A0A0V0G5I5   A0A069DPQ0   A0A023FAX9   A0A1B6IZY0   E2AL35   A0A1B6EQV0   A0A1B6G6S9   A0A1B6I3I5   A0A0P4VHS2   R4G3M1   A0A224XWI9   A0A161MN44   N6T847   A0A0L7RGG1   A0A088ANG5   A0A1L8DRR6   A0A0A9XJE7   A0A0A9XRQ6   A0A0A9XIF7   U5ES11   A0A158NSG3   A0A1B0CLU4   A0A195CSL9   A0A195FSV4   F4WFN0   A0A1S4FBL9   A0A1S4FBR0   Q178Q3   A0A151J4A6   J9HSK7   A0A151WI96   A0A2A3EBK9   E9JDA0   A0A154PF16   A0A1Q3G0F8   A0A067QKZ7   A0A195BL23   A0A182T633   A0A182VYL3   A0A182RNC7   A0A182MWZ4   A0A0P4WIT7   A0A2M3ZIZ9   A0A182F8D1   A0A2M4C0N4   A0A1B0GKU9   A0A0K8TKB6   W5JGH4   A0A182QQU2   A0A182VLR2   A0A182JX04   A0A182HU07   A0A182TI28   A0A182WRS2   Q7QD43   A0A2M4AVN0   A0A182P6L7   A0A2J7RT71   A0A182NG20   Q4V7K1   A0A182XWB3   A0A336MJN8   W8C055   Q28F16   E9HCX7   A0A1S3SBS6   B4JIH0   A0A0A1WT05   A0A3B0JQQ3   B5XEN3   B4MBZ3   A0A0K8TVW8   A0A034WIW4   C3YK25   A0A0Q9WY57   A0A0C9PLV0   Q298K7   B4NBN6  

PDB

5XLN     E-value=6.54144e-53,     Score=522

KEGG

100037428    K03259 translation initiation factor 4E | (RefSeq) eukaryotic initiation factor 4E-2

PATHWAY

03013    RNA transport - Bombyx mori (domestic silkworm)
04150    mTOR signaling pathway - Bombyx mori (domestic silkworm)

GO

GO:0005737   GO:0003743   GO:0000340   GO:0016281   GO:0003723   GO:0006413   GO:0016192   GO:0030117   GO:0005634   GO:0006270   GO:0042555   GO:0048384  

PANTHER

PTHR11960  

Length:

239

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.02136

Exp number, first 60 AAs:

0

Total prob of N-in:

0.22831

outside

1  -  239

 

 

Pi

255.489082

Theta

175.511565

Tajima's D

1.251416

CLR

0.181355

CSRT

0.729213539323034

Interpretation

Uncertain