Gene

KWMTBOMO03260

Pre Gene Modal

BGIBMGA013610

Annotation

PREDICTED:_peroxisomal_membrane_protein_11C_[Papilio_xuthus]

Location

Bomo_Chr6(-):2558064-2560676      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 1.771

CDS

ATGTCATCAATAACTGAGGATGTTTGCGAGCTTTTGGACAGTTACAATGGCAGAGATAAGGTTGTCCGTCTTGCTTGTTACACATTCAAGTTGTATGGATGTCTTACCGACAATAAGCCTTGGCAGACCGCAGGCTCACGACTCTCAAATGCCAGGATGATGCTACGACTGTTTGATGATATCCCGATGATCAGACACACATATAATTATGGCTTAGGAAGAATTGAATCATCAAAAATAGCAGCAACTTTAGGTGTCCTAGCTAATGTGGTGGACCAAGCTTTCCTCCCAGTGGAAAAAGCGTGCTGGCTTTATGACGTAGGAGTACTAAAACTGACTCCTGAAACAGCAGAGAAATTAGAGACTATCAGCACTAGTTTATGGGCAGCTAGTTTATTTATATCACTTTTACAAACAACTCGCGCCATCCAGCACTTGTGTTGGAGCAGGAATTGCCTTCAGACGTTGTCTGAAAACGGTGGAGCTGATGCGAAACTTAAACTAGACATCCGACTAGCCTTACAGGCTGTGGTAGCAGGGAAGCTGTGCCTGGACATCACTCACGCGGTCAGCTGCCTCCCAGCGGGCTGGTTGTGGGGAGAGAAGATCGGAAGCACTAAAGTAGCCGCAATAGCCACAACTTCCTCGGTTATAGGCATAGCCATGTACTTCGCTAGGAAAAGACTGTTGAAATAG

Protein

MSSITEDVCELLDSYNGRDKVVRLACYTFKLYGCLTDNKPWQTAGSRLSNARMMLRLFDDIPMIRHTYNYGLGRIESSKIAATLGVLANVVDQAFLPVEKACWLYDVGVLKLTPETAEKLETISTSLWAASLFISLLQTTRAIQHLCWSRNCLQTLSENGGADAKLKLDIRLALQAVVAGKLCLDITHAVSCLPAGWLWGEKIGSTKVAAIATTSSVIGIAMYFARKRLLK

Uniprot

H9JVP7   A0A1E1WBA7   A0A2H1WW01   A0A194Q1K6   A0A0N1PHW8   A0A2A4JLG6   + More
A0A2W1BQQ6   A0A212FIN7   A0A0L7LHR1   A0A1J1I4V8   A0A1Y1N4Z2   W8C9C3   D6X3J5   A0A023EKN6   B0WS58   A0A182RXY0   A0A182GIW9   A0A0K8TSZ2   A0A182W0C9   A0A1S4F1N8   Q17I93   A0A1L8DVK8   B3LV30   Q7QBN4   A0A1W4UQL8   Q29A64   A0A182QUC9   B4G3X8   A0A1Q3FBC4   A0A0A1XRX4   A0A034WIX9   B4R1F2   B3P7E2   B4PN63   A0A3B0JDH6   Q8MZ03   A0A0L0BY82   B4HFD3   A0A182XVQ0   B4KAV4   A0A182N6M0   B4N994   T1PIY6   A0A1I8N0T9   A0A1I8PCK8   A0A2M3Z871   A0A182F8M9   W5JWP4   A0A194Q1N5   A0A2M4BYL4   A0A182IQ73   A0A2M4ARL3   B4JIC3   B4LXE6   A0A2M4AS20   A0A1A9ZW44   A0A0N0PC83   A0A1B0GE49   A0A336KEM0   A0A182LC32   A0A182HIY2   A0A182X8C7   A0A182K9D8   A0A182TEM1   A0A0B4K701   A0A182P2W9   A0A0N8P1F2   A0A0R3NG84   A0A182UM36   A0A1A9XNY5   A0A1B0B1N1   T1GCN1   A0A0M4ET89   A0A2M4ARS8   A0A0Q9WS44   A0A182LWK6   A0A0Q9WRD4   A0A1B6D6A5   A0A212FIP3   A0A084W8Z7   A0A067QH08   A0A232FJI6   Q4V8Z0   B3MBT6   K7J1A1   A0A1V9XIV5   A0A2J7QUA4   W5UCA7   A0A1W4VQR1   C1C4J8   A0A0K8W690   A0A2R8QCF7   A0A1L8HX26   A0A3B1ITJ5   A0A158P073   A0A1B6JQ36   A0A3B4B8S1   A0A3P9J8N7  

Pubmed

19121390    26354079    28756777    22118469    26227816    28004739    + More
24495485    18362917    19820115    24945155    26483478    26369729    17510324    17994087    12364791    14747013    17210077    15632085    25830018    25348373    17550304    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    26108605    25244985    25315136    20920257    23761445    20966253    24438588    24845553    28648823    20075255    28327890    23127152    23594743    27762356    25329095    21347285    25463417    17554307   

EMBL

BABH01032312    GDQN01006808    JAT84246.1    ODYU01011087    SOQ56604.1    KQ459579    + More
KPI99462.1    KQ460650    KPJ13128.1    NWSH01001169    PCG72283.1    KZ150071    PZC74053.1    AGBW02008354    OWR53596.1    JTDY01001150    KOB74736.1    CVRI01000039    CRK94628.1    GEZM01014972    JAV91950.1    GAMC01002284    JAC04272.1    KQ971374    EEZ97396.1    GAPW01003867    JAC09731.1    DS232064    DS232338    EDS33677.1    EDS40293.1    JXUM01012635    KQ560358    KXJ82848.1    GDAI01000345    JAI17258.1    CH477241    EAT46404.1    GFDF01003624    JAV10460.1    CH902617    EDV42502.1    AAAB01008879    EAA08460.5    CM000070    EAL27487.1    AXCN02000296    CH479179    EDW25083.1    GFDL01010160    JAV24885.1    GBXI01000546    JAD13746.1    GAKP01004318    JAC54634.1    CM000364    EDX14038.1    CH954182    EDV54031.1    CM000160    EDW98118.1    OUUW01000005    SPP80135.1    AE014297    AY113446    AAF56119.2    AAM29451.1    JRES01001160    KNC24980.1    CH480815    EDW43311.1    CH933806    EDW14632.1    CH964232    EDW80527.2    KA648075    AFP62704.1    GGFM01003978    MBW24729.1    ADMH02000003    ETN68133.1    KPI99461.1    GGFJ01008963    MBW58104.1    GGFK01010031    MBW43352.1    CH916369    EDV93004.1    CH940650    EDW67824.1    GGFK01010067    MBW43388.1    KPJ13127.1    CCAG010012093    UFQS01000265    UFQT01000265    SSX02228.1    SSX22605.1    APCN01002105    AFH06581.1    KPU79756.1    KRT00065.1    JXJN01007208    JXJN01007209    JXJN01007210    CAQQ02032882    CAQQ02032883    CAQQ02032884    CAQQ02032885    CAQQ02032886    CAQQ02032887    CP012526    ALC46017.1    GGFK01010194    MBW43515.1    KRF83502.1    AXCM01000743    KRF83503.1    GEDC01016095    JAS21203.1    OWR53598.1    ATLV01021554    KE525320    KFB46691.1    KK853452    KDR07529.1    NNAY01000140    OXU30628.1    BC097141    AAH97141.1    CH902619    EDV36107.1    MNPL01009923    OQR73447.1    NEVH01011186    PNF32164.1    JT411765    AHH39593.1    BT081777    ACO51908.1    GDHF01028657    GDHF01020728    GDHF01013163    GDHF01005673    JAI23657.1    JAI31586.1    JAI39151.1    JAI46641.1    CU855733    CM004466    OCU00581.1    ADTU01000961    GECU01006377    JAT01330.1   

Proteomes

UP000005204    UP000053268    UP000053240    UP000218220    UP000007151    UP000037510    + More
UP000183832    UP000007266    UP000002320    UP000075900    UP000069940    UP000249989    UP000075920    UP000008820    UP000007801    UP000007062    UP000192221    UP000001819    UP000075886    UP000008744    UP000000304    UP000008711    UP000002282    UP000268350    UP000000803    UP000037069    UP000001292    UP000076408    UP000009192    UP000075884    UP000007798    UP000095301    UP000095300    UP000069272    UP000000673    UP000075880    UP000001070    UP000008792    UP000092445    UP000092444    UP000075882    UP000075840    UP000076407    UP000075881    UP000075902    UP000075885    UP000075903    UP000092443    UP000092460    UP000015102    UP000092553    UP000075883    UP000030765    UP000027135    UP000215335    UP000002358    UP000192247    UP000235965    UP000221080    UP000000437    UP000186698    UP000018467    UP000005205    UP000261520    UP000265200   

PRIDE

H9JVP7    Q8MZ03   

Pfam

PF05648   PEX11        + More
PF04083   Abhydro_lipase
PF00561   Abhydrolase_1

Interpro

IPR026510   PEX11C_met        + More
IPR008733   PEX11       
IPR006693   AB_hydrolase_lipase       
IPR029058   AB_hydrolase       
IPR000073   AB_hydrolase_1       

SUPFAM

SSF53474   SSF53474       

Gene 3D

3.40.50.1820    

ProteinModelPortal

H9JVP7   A0A1E1WBA7   A0A2H1WW01   A0A194Q1K6   A0A0N1PHW8   A0A2A4JLG6   + More
A0A2W1BQQ6   A0A212FIN7   A0A0L7LHR1   A0A1J1I4V8   A0A1Y1N4Z2   W8C9C3   D6X3J5   A0A023EKN6   B0WS58   A0A182RXY0   A0A182GIW9   A0A0K8TSZ2   A0A182W0C9   A0A1S4F1N8   Q17I93   A0A1L8DVK8   B3LV30   Q7QBN4   A0A1W4UQL8   Q29A64   A0A182QUC9   B4G3X8   A0A1Q3FBC4   A0A0A1XRX4   A0A034WIX9   B4R1F2   B3P7E2   B4PN63   A0A3B0JDH6   Q8MZ03   A0A0L0BY82   B4HFD3   A0A182XVQ0   B4KAV4   A0A182N6M0   B4N994   T1PIY6   A0A1I8N0T9   A0A1I8PCK8   A0A2M3Z871   A0A182F8M9   W5JWP4   A0A194Q1N5   A0A2M4BYL4   A0A182IQ73   A0A2M4ARL3   B4JIC3   B4LXE6   A0A2M4AS20   A0A1A9ZW44   A0A0N0PC83   A0A1B0GE49   A0A336KEM0   A0A182LC32   A0A182HIY2   A0A182X8C7   A0A182K9D8   A0A182TEM1   A0A0B4K701   A0A182P2W9   A0A0N8P1F2   A0A0R3NG84   A0A182UM36   A0A1A9XNY5   A0A1B0B1N1   T1GCN1   A0A0M4ET89   A0A2M4ARS8   A0A0Q9WS44   A0A182LWK6   A0A0Q9WRD4   A0A1B6D6A5   A0A212FIP3   A0A084W8Z7   A0A067QH08   A0A232FJI6   Q4V8Z0   B3MBT6   K7J1A1   A0A1V9XIV5   A0A2J7QUA4   W5UCA7   A0A1W4VQR1   C1C4J8   A0A0K8W690   A0A2R8QCF7   A0A1L8HX26   A0A3B1ITJ5   A0A158P073   A0A1B6JQ36   A0A3B4B8S1   A0A3P9J8N7  

KEGG

101737343    K13353 peroxin-11C | (RefSeq) peroxisomal membrane protein 11C-like

PATHWAY

04146    Peroxisome - Bombyx mori (domestic silkworm)

GO

GO:0005779   GO:0016559   GO:0005777   GO:0006629   GO:0016021   GO:0015031   GO:0006886   GO:0016192   GO:0030117   GO:0005634   GO:0006270   GO:0042555   GO:0048384  

PANTHER

PTHR20990  

Length:

231

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

19.51912

Exp number, first 60 AAs:

0.00424

Total prob of N-in:

0.29579

outside

1  -  231

 

 

Pi

185.970789

Theta

168.59257

Tajima's D

0.290269

CLR

17.289197

CSRT

0.452277386130693

Interpretation

Uncertain