Gene

KWMTBOMO03259  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA013611

Annotation

PREDICTED:_peroxisomal_membrane_protein_11C-like_[Amyelois_transitella]

Location

Bomo_Chr6(-):2551440-2554326      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 1.843

CDS

ATGGAAGTTGTCGACGAAATCTGTGATCTTTTGCAGTCCCATTCGAATCGTGATAAGATCGTATCCTTAACAAGTTACGTACTGAAGCTATGGGGATCAACGGCCAAACGAAAAGACATTTTAACTGCAAGCGCGCGCATTGCCGCGGCCCGCGCCACCTTGCGACTATTTGATGACGCGGCTGCACTCAAACTCGCACTAGCCTATGGACTTGGTAAACAGGATGGTTCGTTTTGGGGTAGCCTCGGTGTGGCGAACAACGCTTTCACGCTAACATACCTACAGTGCGAGAAGATTGTCTGGTTAATCGACACAGGTGTACTGGTTGTGTCGCCGGACTTTGACTTTAAAGTGAAGACAGCGCATAAGCTTTTCTGGTCATTGTCTGCGTTCGTGGGGCTCATCAGATCGATCCGTGGTCTTCAAGCCAGCTCCCAGCTCCTGAAGTCCTCTGAACCACCCAAATGTGCACCGGCGCGCTTTACACAAGCTTCTCTGGCTACAACTAAGCTTGTACTGGATGTAGTTCATGCCGTGAGCTGGCTGCCGGCTGGGTGGCTTTGGGGCGGGAAACTAAGCGCTCAGCAGGCTAGTATCGTGGCCACTACATCCGCTGTACTTAGTCTTATGGCTCACTATCACGGGAAGAGGTTGCAACCACGCTAA

Protein

MEVVDEICDLLQSHSNRDKIVSLTSYVLKLWGSTAKRKDILTASARIAAARATLRLFDDAAALKLALAYGLGKQDGSFWGSLGVANNAFTLTYLQCEKIVWLIDTGVLVVSPDFDFKVKTAHKLFWSLSAFVGLIRSIRGLQASSQLLKSSEPPKCAPARFTQASLATTKLVLDVVHAVSWLPAGWLWGGKLSAQQASIVATTSAVLSLMAHYHGKRLQPR

Uniprot

H9JVP8   A0A2A4JL19   A0A0N0PC83   A0A212FIP3   A0A194Q1N5   A0A2W1BG43   + More
A0A2H1X367   A0A2H1WW01   H9JVP7   A0A1E1WBA7   A0A2A4JLG6   A0A2W1BQQ6   A0A212FIN7   A0A194Q1K6   A0A0N1PHW8   B4LXE6   B4KAV4   T1PIY6   A0A1I8N0T9   A0A1A9ZW44   A0A1I8PCK8   B4N994   B4R1F2   A0A1B0GE49   Q8MZ03   B3LV30   A0A1W4UQL8   B3P7E2   Q29A64   B4G3X8   B4PN63   B4JIC3   B4HFD3   A0A3B0JDH6   A0A0L0BY82   A0A182GIW9   A0A1S4F1N8   B0WS58   A0A0Q9WS44   A0A0A1XRX4   Q17I93   A0A0Q9WRD4   A0A023EKN6   A0A1Y1N4Z2   A0A1Q3FBC4   D6X3J5   A0A1L8DVK8   A0A336KEM0   A0A034WIX9   A0A182RXY0   A0A0K8TSZ2   A0A182W0C9   A0A0B4K701   Q7QBN4   A0A0N8P1F2   A0A0R3NG84   A0A182IQ73   A0A1J1I4V8   A0A182XVQ0   A0A0M4ET89   A0A182QUC9   A0A2M4ARL3   A0A2M4AS20   A0A182N6M0   W8C9C3   A0A1B6JQ36   W5JWP4   A0A2M3Z871   A0A1A9XNY5   A0A1B0B1N1   A0A182F8M9   A0A2M4BYL4   A0A146LA89   A0A146KQA3   A0A182K9D8   A0A182LC32   A0A182HIY2   A0A182X8C7   A0A182TEM1   A0A1B6D6A5   A0A0K8TGA8   A0A1B6MGK4   A0A182UM36   A0A182P2W9   A0A0T6BBS4   A0A023EXG7   A0A084W8Z7   A0A3P9J8N7   A0A2M4ARS8   A0A182LWK6  

Pubmed

19121390    26354079    22118469    28756777    17994087    25315136    + More
10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    15632085    17550304    26108605    26483478    25830018    17510324    24945155    28004739    18362917    19820115    25348373    26369729    12364791    14747013    17210077    25244985    24495485    20920257    23761445    26823975    20966253    25474469    24438588    17554307   

EMBL

BABH01032314    NWSH01001169    PCG72284.1    KQ460650    KPJ13127.1    AGBW02008354    + More
OWR53598.1    KQ459579    KPI99461.1    KZ150071    PZC74052.1    ODYU01012645    SOQ59074.1    ODYU01011087    SOQ56604.1    BABH01032312    GDQN01006808    JAT84246.1    PCG72283.1    PZC74053.1    OWR53596.1    KPI99462.1    KPJ13128.1    CH940650    EDW67824.1    CH933806    EDW14632.1    KA648075    AFP62704.1    CH964232    EDW80527.2    CM000364    EDX14038.1    CCAG010012093    AE014297    AY113446    AAF56119.2    AAM29451.1    CH902617    EDV42502.1    CH954182    EDV54031.1    CM000070    EAL27487.1    CH479179    EDW25083.1    CM000160    EDW98118.1    CH916369    EDV93004.1    CH480815    EDW43311.1    OUUW01000005    SPP80135.1    JRES01001160    KNC24980.1    JXUM01012635    KQ560358    KXJ82848.1    DS232064    DS232338    EDS33677.1    EDS40293.1    KRF83502.1    GBXI01000546    JAD13746.1    CH477241    EAT46404.1    KRF83503.1    GAPW01003867    JAC09731.1    GEZM01014972    JAV91950.1    GFDL01010160    JAV24885.1    KQ971374    EEZ97396.1    GFDF01003624    JAV10460.1    UFQS01000265    UFQT01000265    SSX02228.1    SSX22605.1    GAKP01004318    JAC54634.1    GDAI01000345    JAI17258.1    AFH06581.1    AAAB01008879    EAA08460.5    KPU79756.1    KRT00065.1    CVRI01000039    CRK94628.1    CP012526    ALC46017.1    AXCN02000296    GGFK01010031    MBW43352.1    GGFK01010067    MBW43388.1    GAMC01002284    JAC04272.1    GECU01006377    JAT01330.1    ADMH02000003    ETN68133.1    GGFM01003978    MBW24729.1    JXJN01007208    JXJN01007209    JXJN01007210    GGFJ01008963    MBW58104.1    GDHC01013381    JAQ05248.1    GDHC01020764    JAP97864.1    APCN01002105    GEDC01016095    JAS21203.1    GBRD01001198    JAG64623.1    GEBQ01004900    JAT35077.1    LJIG01002581    KRT84359.1    GBBI01005081    JAC13631.1    ATLV01021554    KE525320    KFB46691.1    GGFK01010194    MBW43515.1    AXCM01000743   

Proteomes

UP000005204    UP000218220    UP000053240    UP000007151    UP000053268    UP000008792    + More
UP000009192    UP000095301    UP000092445    UP000095300    UP000007798    UP000000304    UP000092444    UP000000803    UP000007801    UP000192221    UP000008711    UP000001819    UP000008744    UP000002282    UP000001070    UP000001292    UP000268350    UP000037069    UP000069940    UP000249989    UP000002320    UP000008820    UP000007266    UP000075900    UP000075920    UP000007062    UP000075880    UP000183832    UP000076408    UP000092553    UP000075886    UP000075884    UP000000673    UP000092443    UP000092460    UP000069272    UP000075881    UP000075882    UP000075840    UP000076407    UP000075902    UP000075903    UP000075885    UP000030765    UP000265200    UP000075883   

PRIDE

H9JVP8    H9JVP7    Q8MZ03   

Pfam

PF05648   PEX11        + More
PF04083   Abhydro_lipase
PF00561   Abhydrolase_1

Interpro

IPR008733   PEX11        + More
IPR026510   PEX11C_met       
IPR006693   AB_hydrolase_lipase       
IPR029058   AB_hydrolase       
IPR000073   AB_hydrolase_1       

SUPFAM

SSF53474   SSF53474       

Gene 3D

3.40.50.1820    

ProteinModelPortal

H9JVP8   A0A2A4JL19   A0A0N0PC83   A0A212FIP3   A0A194Q1N5   A0A2W1BG43   + More
A0A2H1X367   A0A2H1WW01   H9JVP7   A0A1E1WBA7   A0A2A4JLG6   A0A2W1BQQ6   A0A212FIN7   A0A194Q1K6   A0A0N1PHW8   B4LXE6   B4KAV4   T1PIY6   A0A1I8N0T9   A0A1A9ZW44   A0A1I8PCK8   B4N994   B4R1F2   A0A1B0GE49   Q8MZ03   B3LV30   A0A1W4UQL8   B3P7E2   Q29A64   B4G3X8   B4PN63   B4JIC3   B4HFD3   A0A3B0JDH6   A0A0L0BY82   A0A182GIW9   A0A1S4F1N8   B0WS58   A0A0Q9WS44   A0A0A1XRX4   Q17I93   A0A0Q9WRD4   A0A023EKN6   A0A1Y1N4Z2   A0A1Q3FBC4   D6X3J5   A0A1L8DVK8   A0A336KEM0   A0A034WIX9   A0A182RXY0   A0A0K8TSZ2   A0A182W0C9   A0A0B4K701   Q7QBN4   A0A0N8P1F2   A0A0R3NG84   A0A182IQ73   A0A1J1I4V8   A0A182XVQ0   A0A0M4ET89   A0A182QUC9   A0A2M4ARL3   A0A2M4AS20   A0A182N6M0   W8C9C3   A0A1B6JQ36   W5JWP4   A0A2M3Z871   A0A1A9XNY5   A0A1B0B1N1   A0A182F8M9   A0A2M4BYL4   A0A146LA89   A0A146KQA3   A0A182K9D8   A0A182LC32   A0A182HIY2   A0A182X8C7   A0A182TEM1   A0A1B6D6A5   A0A0K8TGA8   A0A1B6MGK4   A0A182UM36   A0A182P2W9   A0A0T6BBS4   A0A023EXG7   A0A084W8Z7   A0A3P9J8N7   A0A2M4ARS8   A0A182LWK6  

KEGG

101737483    K13353 peroxin-11C | (RefSeq) peroxisomal membrane protein 11C-like

PATHWAY

04146    Peroxisome - Bombyx mori (domestic silkworm)

GO

GO:0005779   GO:0016559   GO:0005777   GO:0006629   GO:0016021   GO:0015031   GO:0006886   GO:0016192   GO:0030117   GO:0005634   GO:0006270   GO:0042555   GO:0048384  

PANTHER

PTHR20990  

Length:

221

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

1.81813

Exp number, first 60 AAs:

0.00751

Total prob of N-in:

0.07226

outside

1  -  221

 

 

Pi

162.106687

Theta

135.185563

Tajima's D

0.256023

CLR

0.669562

CSRT

0.439978001099945

Interpretation

Uncertain