SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO03256
Pre Gene Modal
BGIBMGA013601
Annotation
PREDICTED:_uncharacterized_protein_LOC106136756_[Amyelois_transitella]
Location in the cell
Mitochondrial   Reliability : 1.452 Nuclear   Reliability : 1.121
 

Sequence

CDS
ATGTGTCGAGGCGGAGGCGGCTCAGCTGGGCCTGTGTGTCGGCAGATCTGCGCGGAGGGCGTGGGCGCGCTGTGCGAGCTGGCGGCGGCGCGGCCCCGGGACGCCGCGTGCTGTCTGGCGCCGCTCCTGCTGGTCATGGCGCACTCGCCGGAGTCCGTCTCCCTGACGCCCAAGTTCGCGGAACTGTTCTCGATCCTGTTGAACGCTCGCCCCACGCTGGTGCAGCGAACACTAGGTCGCGGCGGAGTCGCCGGCTCTGAGATTCTCTTGAGACTCTTCTTGGAACAGCTAGAAAACCATGAGTCGTACAACGTGTCCCGCGCGGCCGTGCTGTCGGTGTGGCTGCACGCGCTGTGGCGCGGCCCGCCCGCCGCGCTCGCCGTGCTGGACGCCGGCGCCGTGCTGTGCCAGCACTGGGCGCAGCTCGACGACCACGCCACCGCCATGCTGCAGGACGGAAATGCCAAAGAAATAACCGCGAATGCGGTCAGCAACGCGGCGACGGCTCCACTGCTGTGCGAGTGCGTGCTCCGCGCCGCGCACGCCCGCACGCAGCGCACGCACGCGCACGCCCTGCTGCTCGCCGCACTGCGGGCGCAGCACGCGGCCAGACAGCGGATACATGTGGACAATGCGCTGCAGCAAATAGGATTGAAGATGAGCTCGGAGGAGCTGGTGATATATCGTGCCGGCAACGCGGTTTTGTCAGCCCCGCCGCAGCATCCCGCTCATCTGACGCTTTGGAGGCTGTTCATGCATCTCTATTTAGAACGAGTATCGGCCAACGCGAACGACCCCTGTCCCGCGGCCGGGCCCCTTTTCTACAGCGGCATCATAAAGACACGCTCTCTCGGTCACATCAAGAAACGTCTCCAAGAGCTGGCGGCCCACCATAAAGCCGAAGCCGACAAAATAAAGGAGATTTTAAGTGACAAAGTCGAAATAAAATCCGCCGAAATTGCCAGCACGTCGCAGAGGGCCGACGGTGAGCTGTTTAAAGATCTGACCATCGCGGATTTGACCGGAGAGTCGAGCGACAGCGACTCGGGGGAGGGAGAGTGGGGCGACGGCGAGGGTGACGCCGCCCCGGACAACACAACTAGAAACACAGATTTCGATGTCAGTAAAATCGATCTATCGAACTACTACATCGGCGCCCACAAAATGATGCTGATGTACCTGCGCTGGCTGGAGGACGGAGAGCGGGTCACCGCCCGACAGCACCACGCCGACCTGACCAGCTTCATGACGCAGCAGTGTTTAGAAGCCGGCTGGCGTCACGCGCTGCGCCAGCTCCGCCCCCCTCCCGCGTCGGAGCCGGACCCCCCTCCGGCGCCCGTCGCCGCCGACCCTCCCAAGTCACAGTTTGCAGTCGGCCTTGATTCCATACTCAGTATCGGACAGAAATCACGAAAAAGACGCAGAAAAAATATTCTGAAGCCAGTGTTGGAAGACGTAGAGTTCAAAGACACTCACCGTTTGATTTCCGCTGCAGAAAATCATCTGAATAAAATTAAATTACTGGCTAAAGAGTGGTCGTCGGAGACAGATCGCGTGAGGGCGCTGGACGTCCAGCTGTGGGTGCTGCTGGGCTCGCTGCGCGCGCGGCGCCCCCTGCCGCCCGTCAGCAGGCAGTGCGCCAACAAGTGCCCGCCGGTCAGCGTGCGCCTCAATGCTGAAGAATGGTGTATATCAGCCGGAGTCGAGCGTAGTATCAGAGAAAACAGGTACTTGTGGAATTTTACTAGAAATTATTAG
Protein
MCRGGGGSAGPVCRQICAEGVGALCELAAARPRDAACCLAPLLLVMAHSPESVSLTPKFAELFSILLNARPTLVQRTLGRGGVAGSEILLRLFLEQLENHESYNVSRAAVLSVWLHALWRGPPAALAVLDAGAVLCQHWAQLDDHATAMLQDGNAKEITANAVSNAATAPLLCECVLRAAHARTQRTHAHALLLAALRAQHAARQRIHVDNALQQIGLKMSSEELVIYRAGNAVLSAPPQHPAHLTLWRLFMHLYLERVSANANDPCPAAGPLFYSGIIKTRSLGHIKKRLQELAAHHKAEADKIKEILSDKVEIKSAEIASTSQRADGELFKDLTIADLTGESSDSDSGEGEWGDGEGDAAPDNTTRNTDFDVSKIDLSNYYIGAHKMMLMYLRWLEDGERVTARQHHADLTSFMTQQCLEAGWRHALRQLRPPPASEPDPPPAPVAADPPKSQFAVGLDSILSIGQKSRKRRRKNILKPVLEDVEFKDTHRLISAAENHLNKIKLLAKEWSSETDRVRALDVQLWVLLGSLRARRPLPPVSRQCANKCPPVSVRLNAEEWCISAGVERSIRENRYLWNFTRNY

Summary

Interpro
IPR029651   EPG-5       
PDB
3U5P     E-value=0.0215301,     Score=90

Ontologies

Topology

Length:
585
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.01085
Exp number, first 60 AAs:
0.00509
Total prob of N-in:
0.00095
outside
1  -  585
 
 

Population Genetic Test Statistics

Pi
256.719837
Theta
172.400352
Tajima's D
2.206132
CLR
0.525864
CSRT
0.913254337283136
Interpretation
Uncertain
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