Gene

KWMTBOMO03253

Pre Gene Modal

BGIBMGA013599

Annotation

PREDICTED:_uncharacterized_protein_LOC106136779_[Amyelois_transitella]

Location

Bomo_Chr6(+):2489367-2493530      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 4.648

CDS

ATGTCGTGGAGCAATGATTTAGTGCTGGAATTTTTGGAACTGTATCGAAGGGAACAGCACCTATGGGATCCAAAACATCCACAGCACAAAAATAGAATCGAAAATAACAATGCCTGGCTCAGAATACAATCATCTTTAAGCATTCATTGCTCGGTCGTCGATCTTAAAAAAAAGAAGGAATCGCTGATGACTTCCTTTAGAATGCATTTAAAAAGAAAATTAAAATCGCAAGATGGATACAGTACGACTTGGTTTGCTTATCCGATAATGGAAAGCTTTCTTGGCGGGAAATATGAATGTGACAACACCAACCAATTGGAACATGAGTTCTATACTAATGACAATCAATTCAACACTCAAACGTTACTGTCCGAAGCGAGCACGCCGCGGACCGCGAACCCGACCGACAAGAAATCCAACAAACAAACGGTTCAAGTAAACAATTCGAAAACGAAGAACTTCGACAATACCGAATTGAAATACGCAAAGAAACAAATGGACGATGCTGTAACGTATTTGAAGAACGTTGCGGCTCAGAAACGGGAATCAGACGAATGTGAACTCTACGGGCGACTGCTCGCTAAGAAGCTACGGAAATTAGACGAACATCAACGAGACGTGGCCATGCACGAAATAGACAATATAATGTTCAGGGCGAGAATGCAGACCGGTGGCACGCAACGGAGTTACACGGCTTCAACTTCGCCAGTACCGAGGAAGATTAAATCCCCGATCTTCATTGTGACCCAGGAAAACGGACAACAGTTCGAAGATGAGAATACGCCTTACCAAAATCACATGCAAGGACTGCAGCAGACGTAA

Protein

MSWSNDLVLEFLELYRREQHLWDPKHPQHKNRIENNNAWLRIQSSLSIHCSVVDLKKKKESLMTSFRMHLKRKLKSQDGYSTTWFAYPIMESFLGGKYECDNTNQLEHEFYTNDNQFNTQTLLSEASTPRTANPTDKKSNKQTVQVNNSKTKNFDNTELKYAKKQMDDAVTYLKNVAAQKRESDECELYGRLLAKKLRKLDEHQRDVAMHEIDNIMFRARMQTGGTQRSYTASTSPVPRKIKSPIFIVTQENGQQFEDENTPYQNHMQGLQQT

Uniprot

H9JVN6   A0A2W1BMV5   A0A2H1W3Y4   A0A2A4IU91   A0A0N1I746   A0A194Q1L1   + More
A0A1E1WDB8   A0A0L7LR30   A0A2S2R7C2   J9LGQ9   A0A1B6DD16   A0A0A9W1X7   A0A2S2QSE3   A0A1S3D939   A0A2J7QR13   H9JIJ6   A0A2H1X1W5   J9KTS1   J9KHW8   A0A0L7KNX0   A0A2A4IZX1   N6U0H8   U4U649   A0A0L7LRU9   A0A0L7LS72   A0A0A9ZAX7   A0A0L7LTG8   A0A2R7W4H9   A0A146LGX9   A0A0A9ZI48   A0A2R7W9J3   A0A2H1VT81   A0A0T6B4A8   A0A2R7X838   A0A0L7KW71   A0A0T6BDC4   A0A0T6BG92   H9JCZ9   A0A2A3E279   N6T7K0   A0A1B6MSW9   T1HCX8   A0A088ABA8   A0A2J7RLR7   A0A194RAD2   A0A034WSJ6   A0A2H1VX66   A0A2A4IYX4   A0A212FAX7   A0A1W4X7M5   A0A151JRJ1   A0A154NW92   A0A1Y1KAT5   A0A2J7R0L2   A0A195F1C3   A0A2S2Q3U1   A0A194QG94   A0A0T6BE37   A0A151XG58   A0A2S2Q233   A0A146M053   A0A2S2NY89   A0A0T6B5U2   A0A158P3P4   A0A2W1BGI9   A0A067RGZ6   E9IK63   A0A067RT45   S4P4D9   A0A0A9XPF1   A0A0N1PJ65   J9LJQ4   A0A2J7RFM3  

Pubmed

19121390    28756777    26354079    26227816    25401762    23537049    + More
26823975    25348373    22118469    28004739    21347285    24845553    21282665    23622113   

EMBL

BABH01032319    KZ150071    PZC74050.1    ODYU01005868    SOQ47194.1    NWSH01006266    + More
PCG63547.1    KQ460650    KPJ13131.1    KQ459579    KPI99467.1    GDQN01006052    JAT85002.1    JTDY01000288    KOB77890.1    GGMS01016655    MBY85858.1    ABLF02020255    GEDC01013756    JAS23542.1    GBHO01043151    JAG00453.1    GGMS01011227    MBY80430.1    NEVH01012030    PNF31028.1    BABH01027055    ODYU01012366    SOQ58644.1    ABLF02023887    ABLF02023667    ABLF02023668    JTDY01007687    KOB65013.1    NWSH01004534    PCG64978.1    APGK01044204    KB741021    ENN75035.1    KB632003    ERL87813.1    JTDY01000232    KOB78157.1    JTDY01000200    KOB78325.1    GBHO01001172    JAG42432.1    JTDY01000115    KOB78773.1    KK854275    PTY14111.1    GDHC01011291    JAQ07338.1    GBHO01001174    JAG42430.1    KK854494    PTY16347.1    ODYU01004279    SOQ43976.1    LJIG01009919    KRT82118.1    KK857335    PTY27055.1    JTDY01005007    KOB67483.1    LJIG01001616    KRT85324.1    LJIG01000751    KRT86189.1    BABH01027637    KZ288469    PBC25366.1    APGK01049447    APGK01049448    KB741154    ENN73653.1    GEBQ01000940    JAT39037.1    ACPB03000414    ACPB03000415    NEVH01002683    PNF41782.1    KQ460685    KPJ12821.1    GAKP01001328    JAC57624.1    ODYU01004940    SOQ45326.1    NWSH01004545    PCG64961.1    AGBW02009414    OWR50880.1    KQ978589    KYN29977.1    KQ434773    KZC03949.1    GEZM01087764    JAV58494.1    NEVH01008231    PNF34374.1    KQ981880    KYN33967.1    GGMS01003176    MBY72379.1    KQ459232    KPJ02471.1    LJIG01001551    KRT85389.1    KQ982174    KYQ59369.1    GGMS01002510    MBY71713.1    GDHC01005456    JAQ13173.1    GGMR01009518    MBY22137.1    LJIG01009594    KRT82768.1    ADTU01008311    KZ150078    PZC73918.1    KK852686    KDR18433.1    GL763924    EFZ19065.1    KK852432    KDR23985.1    GAIX01009087    JAA83473.1    GBHO01021750    GBHO01021748    JAG21854.1    JAG21856.1    KQ459988    KPJ18795.1    ABLF02014879    NEVH01004410    PNF39635.1   

Proteomes

UP000005204    UP000218220    UP000053240    UP000053268    UP000037510    UP000007819    + More
UP000079169    UP000235965    UP000019118    UP000030742    UP000242457    UP000015103    UP000005203    UP000007151    UP000192223    UP000078492    UP000076502    UP000078541    UP000075809    UP000005205    UP000027135   

PRIDE

H9JVN6    H9JIJ6    H9JCZ9   

Pfam

PF10545   MADF_DNA_bdg        + More
PF13359   DDE_Tnp_4
PF05485   THAP

Interpro

IPR006578   MADF-dom        + More
IPR006612   THAP_Znf       
IPR027806   HARBI1_dom       
IPR012337   RNaseH-like_sf       
IPR017877   Myb-like_dom       
IPR001005   SANT/Myb       

SUPFAM

SSF53098   SSF53098       

ProteinModelPortal

H9JVN6   A0A2W1BMV5   A0A2H1W3Y4   A0A2A4IU91   A0A0N1I746   A0A194Q1L1   + More
A0A1E1WDB8   A0A0L7LR30   A0A2S2R7C2   J9LGQ9   A0A1B6DD16   A0A0A9W1X7   A0A2S2QSE3   A0A1S3D939   A0A2J7QR13   H9JIJ6   A0A2H1X1W5   J9KTS1   J9KHW8   A0A0L7KNX0   A0A2A4IZX1   N6U0H8   U4U649   A0A0L7LRU9   A0A0L7LS72   A0A0A9ZAX7   A0A0L7LTG8   A0A2R7W4H9   A0A146LGX9   A0A0A9ZI48   A0A2R7W9J3   A0A2H1VT81   A0A0T6B4A8   A0A2R7X838   A0A0L7KW71   A0A0T6BDC4   A0A0T6BG92   H9JCZ9   A0A2A3E279   N6T7K0   A0A1B6MSW9   T1HCX8   A0A088ABA8   A0A2J7RLR7   A0A194RAD2   A0A034WSJ6   A0A2H1VX66   A0A2A4IYX4   A0A212FAX7   A0A1W4X7M5   A0A151JRJ1   A0A154NW92   A0A1Y1KAT5   A0A2J7R0L2   A0A195F1C3   A0A2S2Q3U1   A0A194QG94   A0A0T6BE37   A0A151XG58   A0A2S2Q233   A0A146M053   A0A2S2NY89   A0A0T6B5U2   A0A158P3P4   A0A2W1BGI9   A0A067RGZ6   E9IK63   A0A067RT45   S4P4D9   A0A0A9XPF1   A0A0N1PJ65   J9LJQ4   A0A2J7RFM3  

PDB

5IJX     E-value=0.056663,     Score=83

KEGG

101742879    no KO assigned | (RefSeq) uncharacterized LOC101742879

GO

GO:0016301   GO:0003676   GO:0016740  

Length:

273

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00334

Exp number, first 60 AAs:

0.00037

Total prob of N-in:

0.01537

outside

1  -  273

 

 

Pi

71.009047

Theta

156.956635

Tajima's D

-0.489296

CLR

165.266692

CSRT

0.240437978101095

Interpretation

Uncertain