Gene

KWMTBOMO03249

Pre Gene Modal

BGIBMGA013613

Annotation

F-box_only_protein_9_[Papilio_xuthus]

Location

Bomo_Chr6(-):2446267-2447976      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 3.161

CDS

ATGGCTTCGAACACGAGGTTCCGAGCGCGCAGGAAGGAGCTCGAGCATGAACAGACGTTCCACCTGGAGCTGGAGCTGTGCGACGTCCGCAGCCGGCGCAACTTCCAGCTGCAGTGGCGCCACCACTCGGTGCGCGTGCGCCTCGACCAGTGGACGCAGTTCGAGCTGGCGCCCGGCCGGTACCCGCCCTTCGCCTTCAGCCGCGTGCGCACCTACACGGCCGAGTCGCACGCGCCGCTGCTGCCCACGCACGCCTACACATAG

Protein

MASNTRFRARRKELEHEQTFHLELELCDVRSRRNFQLQWRHHSVRVRLDQWTQFELAPGRYPPFAFSRVRTYTAESHAPLLPTHAYT

Uniprot

H9JVQ0   A0A2A4J9Z6   A0A194Q1Q0   A0A2W1BL78   A0A0N1I7R6   A0A2H1W276   + More
S4PCX0   A0A212ELZ5   A0A2P8ZKM9   A0A067QSD7   A0A1B6F0I0   A0A1B6GP95   A0A1B6IWH7   A0A0C9QPQ5   Q16EZ2   A0A1S4G369   T1IV17   A0A1L8DD09   A0A0C9R7W0   R4WQA9   A0A087UJI1   D6X4P0   A0A1Y1LDA5   A0A023ETM9   A0A182H5B6   A0A023ESI2   A0A293N5Q2   A0A023ETM6   A0A1Y1LB29   A0A2J7PDI2   V5IA03   W5JBU0   A0A226E1C9   A0A1B6M3Y9   A0A1B6KJN6   A0A2M3Z4I3   A0A2M3Z4G5   A0A2R7VQR0   A0A2M3Z4M9   A0A2M4BMM8   A0A2M3ZGT8   A0A182FFH8   A0A336M4K0   A0A182T5T4   A0A0P4VNI0   A0A0K8TRB3   T1I2X2   A0A2M4AE88   A0A2M4AF10   C3XPR4   A0A154PBI9   A0A224YMQ3   A0A131Z601   A0A224XS30   A0A0V0G4K0   A0A069DTP5   L7LXE0   U5EZS5   A0A0L7QLQ0   A0A3Q0IQV3   A0A131XUY3   A0A0A9XGR1   A0A0K8RFV7   A0A182J8T1   A0A023FAB4   B7Q4U3   A0A310SJZ1   R7UX38   A0A0J7L8Q6   A0A084WMZ4   E2BX07   N6U1S8   E0VE31   A0A182N7H8   A0A2R5LAI3   E9ILF0   A0A2A3E7S1   B0X0N5   A0A088ATP1   U4UJ00   A0A1Q3FI59   A0A2T7PGK6   A0A182L425   Q7QIC8   A0A182YJG9   A0A182TXN1   A0A0M9ACY8   A0A182I6B5   A0A182JVW9   A0A182PEW6   A0A182USR3   A0A1E1XRH9   A0A182X254   A0A023G7P9   G3MIU7   K7IN34   A0A232EW16   A0A1Z5L9X2   A0A158NH73   A0A195FFU6  

Pubmed

19121390    26354079    28756777    23622113    22118469    29403074    + More
24845553    17510324    23691247    18362917    19820115    28004739    24945155    26483478    20920257    23761445    27129103    26369729    18563158    28797301    26830274    26334808    25576852    25401762    26823975    25474469    23254933    24438588    20798317    23537049    20566863    21282665    20966253    12364791    14747013    17210077    25244985    29209593    22216098    20075255    28648823    28528879    21347285   

EMBL

BABH01032321    NWSH01002255    PCG68791.1    KQ459579    KPI99476.1    KZ150071    + More
PZC74047.1    KQ460542    KPJ14108.1    ODYU01005868    SOQ47190.1    GAIX01003916    JAA88644.1    AGBW02013960    OWR42512.1    PYGN01000028    PSN57052.1    KK853353    KDR08236.1    GECZ01026000    JAS43769.1    GECZ01005513    JAS64256.1    GECU01016417    JAS91289.1    GBYB01005609    JAG75376.1    CH478542    EAT32805.1    JH431569    GFDF01009874    JAV04210.1    GBYB01002851    JAG72618.1    AK417881    BAN21096.1    KK120096    KFM77520.1    KQ971380    EEZ97671.2    GEZM01060830    JAV70868.1    GAPW01001367    JAC12231.1    JXUM01111220    KQ565482    KXJ70920.1    GAPW01001368    JAC12230.1    GFWV01022243    MAA46970.1    GAPW01000898    JAC12700.1    GEZM01060829    JAV70869.1    NEVH01026386    PNF14383.1    GALX01002035    JAB66431.1    ADMH02001849    ETN60888.1    LNIX01000009    OXA50276.1    GEBQ01009331    JAT30646.1    GEBQ01028309    JAT11668.1    GGFM01002681    MBW23432.1    GGFM01002659    MBW23410.1    KK854003    PTY08980.1    GGFM01002704    MBW23455.1    GGFJ01005189    MBW54330.1    GGFM01007025    MBW27776.1    UFQT01000550    SSX25185.1    GDKW01002543    JAI54052.1    GDAI01000932    JAI16671.1    ACPB03014809    GGFK01005784    MBW39105.1    GGFK01006032    MBW39353.1    GG666451    EEN69935.1    KQ434851    KZC08618.1    GFPF01007752    MAA18898.1    GEDV01002352    JAP86205.1    GFTR01005615    JAW10811.1    GECL01003130    JAP02994.1    GBGD01001832    JAC87057.1    GACK01008564    JAA56470.1    GANO01000241    JAB59630.1    KQ414915    KOC59484.1    GEFM01004937    JAP70859.1    GBHO01027334    GDHC01005441    JAG16270.1    JAQ13188.1    GADI01004429    JAA69379.1    GBBI01000367    JAC18345.1    ABJB010450576    ABJB011014713    DS857608    EEC13865.1    KQ765373    OAD53955.1    AMQN01000935    KB297234    ELU10842.1    LBMM01000270    KMR02240.1    ATLV01024541    KE525352    KFB51588.1    GL451202    EFN79726.1    APGK01043169    APGK01043170    KB741013    ENN75510.1    DS235088    EEB11637.1    GGLE01002363    MBY06489.1    GL764074    EFZ18613.1    KZ288357    PBC27101.1    DS232242    EDS38277.1    KB632375    ERL94039.1    GFDL01007826    JAV27219.1    PZQS01000004    PVD32500.1    AAAB01008807    EAA04165.3    KQ435698    KOX80713.1    APCN01003602    GFAA01001517    JAU01918.1    GBBM01005197    JAC30221.1    JO841798    AEO33415.1    NNAY01001934    OXU22511.1    GFJQ02002774    JAW04196.1    ADTU01015190    KQ981625    KYN39097.1   

Proteomes

UP000005204    UP000218220    UP000053268    UP000053240    UP000007151    UP000245037    + More
UP000027135    UP000008820    UP000054359    UP000007266    UP000069940    UP000249989    UP000235965    UP000000673    UP000198287    UP000069272    UP000075901    UP000015103    UP000001554    UP000076502    UP000053825    UP000079169    UP000075880    UP000001555    UP000014760    UP000036403    UP000030765    UP000008237    UP000019118    UP000009046    UP000075884    UP000242457    UP000002320    UP000005203    UP000030742    UP000245119    UP000075882    UP000007062    UP000076408    UP000075902    UP000053105    UP000075840    UP000075881    UP000075885    UP000075903    UP000076407    UP000002358    UP000215335    UP000005205    UP000078541   

PRIDE

H9JVQ0   

Pfam

PF12937   F-box-like        + More
PF13181   TPR_8
PF00646   F-box

Interpro

IPR019734   TPR_repeat        + More
IPR001810   F-box_dom       
IPR011990   TPR-like_helical_dom_sf       
IPR013026   TPR-contain_dom       
IPR036047   F-box-like_dom_sf       
IPR036181   MIT_dom_sf       

SUPFAM

SSF81383   SSF81383        + More
SSF116846   SSF116846       
SSF48452   SSF48452       

Gene 3D

1.25.40.10    

ProteinModelPortal

H9JVQ0   A0A2A4J9Z6   A0A194Q1Q0   A0A2W1BL78   A0A0N1I7R6   A0A2H1W276   + More
S4PCX0   A0A212ELZ5   A0A2P8ZKM9   A0A067QSD7   A0A1B6F0I0   A0A1B6GP95   A0A1B6IWH7   A0A0C9QPQ5   Q16EZ2   A0A1S4G369   T1IV17   A0A1L8DD09   A0A0C9R7W0   R4WQA9   A0A087UJI1   D6X4P0   A0A1Y1LDA5   A0A023ETM9   A0A182H5B6   A0A023ESI2   A0A293N5Q2   A0A023ETM6   A0A1Y1LB29   A0A2J7PDI2   V5IA03   W5JBU0   A0A226E1C9   A0A1B6M3Y9   A0A1B6KJN6   A0A2M3Z4I3   A0A2M3Z4G5   A0A2R7VQR0   A0A2M3Z4M9   A0A2M4BMM8   A0A2M3ZGT8   A0A182FFH8   A0A336M4K0   A0A182T5T4   A0A0P4VNI0   A0A0K8TRB3   T1I2X2   A0A2M4AE88   A0A2M4AF10   C3XPR4   A0A154PBI9   A0A224YMQ3   A0A131Z601   A0A224XS30   A0A0V0G4K0   A0A069DTP5   L7LXE0   U5EZS5   A0A0L7QLQ0   A0A3Q0IQV3   A0A131XUY3   A0A0A9XGR1   A0A0K8RFV7   A0A182J8T1   A0A023FAB4   B7Q4U3   A0A310SJZ1   R7UX38   A0A0J7L8Q6   A0A084WMZ4   E2BX07   N6U1S8   E0VE31   A0A182N7H8   A0A2R5LAI3   E9ILF0   A0A2A3E7S1   B0X0N5   A0A088ATP1   U4UJ00   A0A1Q3FI59   A0A2T7PGK6   A0A182L425   Q7QIC8   A0A182YJG9   A0A182TXN1   A0A0M9ACY8   A0A182I6B5   A0A182JVW9   A0A182PEW6   A0A182USR3   A0A1E1XRH9   A0A182X254   A0A023G7P9   G3MIU7   K7IN34   A0A232EW16   A0A1Z5L9X2   A0A158NH73   A0A195FFU6  

KEGG

101737813    K10295 F-box protein 9 | (RefSeq) F-box only protein 9

GO

GO:0005737   GO:0031146   GO:0019005  

Length:

87

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0002

Exp number, first 60 AAs:

0

Total prob of N-in:

0.68981

inside

1  -  87

 

 

Pi

336.717914

Theta

182.685573

Tajima's D

2.784273

CLR

0.246192

CSRT

0.968501574921254

Interpretation

Uncertain