SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO03246  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA013614
Annotation
PREDICTED:_xylulose_kinase_isoform_X2_[Amyelois_transitella]
Location in the cell
PlasmaMembrane   Reliability : 1.338
 

Sequence

CDS
ATGTTTGAGGAATCAAAGAATAAAAGTTTTTTAGGGTTTGATTTTAGTACACAGAGGTTAAAAGCACTAGTAATCAATGAAGACTACAATGTACTCCACGAGGCTGATGTTGAATTTGATGTTGACTTGCCTGAGTTTAGGACCGCAGGGGGTGTGGTGCGCGGCGAGAAGGGTGAGGTAACAGCACCTCCCCTTTTATGGGTGAAAGCATTAGACATGGTTTTGGACCGACTAATTGTAGCTGGACTAGACTTCTCCACTGTGTATGCTATATCTGGAGCAGCTCAGCAACACGGTTCTGTGTGGTGGTCGAAAGATGCCGAAGCGAAATTAGGCAGTTTGTCATCAGACGACTTCTTGCACACTCAGTTGGCGTCCGCATTTTTGTGCGACTCCCCAGTTTGGATGGACTCTAGTACGTCTGCCGACTGCAGGGCTCTGGAGGAAGCCATGGGTGGACCAGAGGAATTAGCTAAAATCACAGGATCTAGGGCGTACGAACGTTTTACCGGGCCACAGATTCGTAAAATGTTCCGTACTCGGCCCCGGGTGTACCAGGCCGCGCCCCGGATATCCCTGGTGTCCTCGTTCGCGTGCTCGCTGTTCCTGGGCAAGATCGCGCCCATCGACCTGGCGGACGGATCCGGAATGAACCTTCTGGACATTAGGACTATGCAATGGGACGAACGGGCACTGAAGGCATGCGGGGACGAGTCGCTGATCCACAAACTGGGTGCGGCAGTCCCCAGCGCGAGCGACGTCGGGCCGGTGTCCGCCTACTTCGTGCAGCGGTACGGCTTCAGGCCCGACTGCCGCGTGGTGGCCTTCACCGGGGACAACTGCTCTGCCCTGGCCGGCCTTAGACTTCGTTCGGGTTGGATAGGGCTCAGCCTGGGCACCAGCGACACCCTGCTGCTCGGCCTCACGGAGCCCGCGGCCCCGGCGGCCGGCCACGTGCTCGTGGGGCCGACTCCCGACGCTCCGTACATGGCGTTACTGTGCTTCGCCAACGGCTCGCTGACGAGGCAGAACCACAGGGACCGGCTGGTGGGCCCGAGCTGGGAGGCGTTTAATGAGCTCCTCAGGTCGACCGTCCGAGGGAATATGGGATTCATGGGAGTGTACTACGACACAGCAGAGATAGTGCCGCGCCGCGCCGCCGCCCGCCTGCTGCAGGCCAGCGGAGGCCGCGCCGTGCAGGCCGGGGCTCCGGCGGCGGAGGCCCGCGCGCTGCTGGAGGGGCAGGCGCTCGCCCGTAGAGCGCACGCCGAGGACCTGCACTTCACTATCGGCCCCTCGTCCAAGCTGATAGCGACCGGGGGCGCCGCCGCCAACAAAGAGTTCCTCCAGATATTTGCTGACGTCTTCAATGTTCCCGTGTACGTACTGGGCGAGCACGGCAACGCGGCTCTGCTGGGGGCCGCCGTCCGCGCCGCCGCGGTGTGGTCCCGGGACGCCGCCGTGTCGCTGCCAGGCTCGGAGCCCACCCTGACCCCGGTGGCGACGCCCTACCCGGACCACGACGCCATCTACACGCCGATGCTGGCGCGCTACCGGCAGATCATCCAGGAGATGCCCCGGCTGCACTGA
Protein
MFEESKNKSFLGFDFSTQRLKALVINEDYNVLHEADVEFDVDLPEFRTAGGVVRGEKGEVTAPPLLWVKALDMVLDRLIVAGLDFSTVYAISGAAQQHGSVWWSKDAEAKLGSLSSDDFLHTQLASAFLCDSPVWMDSSTSADCRALEEAMGGPEELAKITGSRAYERFTGPQIRKMFRTRPRVYQAAPRISLVSSFACSLFLGKIAPIDLADGSGMNLLDIRTMQWDERALKACGDESLIHKLGAAVPSASDVGPVSAYFVQRYGFRPDCRVVAFTGDNCSALAGLRLRSGWIGLSLGTSDTLLLGLTEPAAPAAGHVLVGPTPDAPYMALLCFANGSLTRQNHRDRLVGPSWEAFNELLRSTVRGNMGFMGVYYDTAEIVPRRAAARLLQASGGRAVQAGAPAAEARALLEGQALARRAHAEDLHFTIGPSSKLIATGGAAANKEFLQIFADVFNVPVYVLGEHGNAALLGAAVRAAAVWSRDAAVSLPGSEPTLTPVATPYPDHDAIYTPMLARYRQIIQEMPRLH

Summary

EMBL
BABH01032328    BABH01032329    ODYU01005188    SOQ45803.1    NWSH01002255    PCG68797.1    + More
KZ150071    PZC74043.1    KQ459579    KPI99473.1    AGBW02013960    OWR42515.1    JTDY01000534    KOB76762.1    GEDC01003396    JAS33902.1    GEZM01061442    JAV70480.1    GECZ01024305    GECZ01009102    JAS45464.1    JAS60667.1    KZ288197    PBC33720.1    GECU01035043    JAS72663.1    KQ971311    EEZ98930.1    GL763877    EFZ19200.1    NNAY01000777    OXU26563.1    KQ434773    KZC04011.1    GL449382    EFN82885.1    NEVH01011186    PNF32173.1    GL888404    EGI61536.1    APGK01035437    KB740925    ENN78037.1    KB631924    ERL87269.1    PNF32175.1    KQ981864    KYN34375.1    GBYB01005152    JAG74919.1    KK853184    KDR10119.1    KK107185    QOIP01000012    EZA55801.1    RLU15750.1    KQ976662    KYM78414.1    ABLF02014747    ABLF02014748    ABLF02014751    ABLF02014752    ABLF02052021    GECL01002752    JAP03372.1    KQ414914    KOC59536.1    GBHO01001230    JAG42374.1    GBBI01003036    JAC15676.1    GDHC01011978    JAQ06651.1    KK857495    PTY27231.1    GBRD01013387    GBRD01013386    JAG52439.1    GDKW01002244    JAI54351.1    ACPB03020332    KQ771002    OAD52555.1    GBYB01011607    JAG81374.1    KQ977115    KYN05619.1    GANP01005566    JAB78902.1    GDRN01071491    JAI63674.1    ABJB010109450    DS716413    EEC06241.1    LSMT01000136    PFX26011.1    CAEY01000474    EAAA01002410    CP012526    ALC47141.1    GL442545    EFN63358.1    GG666567    EEN54131.1    MRZV01000328    PIK52463.1    GFWV01018897    MAA43625.1    AADN05000033    KQ435801    KOX73255.1    AGTO01020343    RCHS01003049    RMX44188.1    AEFK01085896    AEFK01085897    AEFK01085898    AEFK01085899    AEFK01085900    AEFK01085901    AEFK01085902    AEFK01085903    AEFK01085904    AEFK01085905    AKHW03000487    KYO46966.1    GFDL01005723    JAV29322.1    CH477646    EAT37839.1    PNF32179.1    DS232495    EDS42638.1    CH478115    EAT33917.1    LJIJ01000330    ODM98719.1    LSYS01002888    OPJ85271.1    IACF01006820    LAB72403.1    MUZQ01000098    OWK58480.1    GFAC01005096    JAT94092.1    CH902617    EDV42310.1    APCN01001201    AAAB01008846    EAA06371.4    HAAF01001394    CCP73220.1    NEDP02002268    OWF51404.1    BC053262    AAH53262.1    AANG04001816    GECU01007310    JAT00397.1    AGTP01006788    DS469520    EDO47320.1    GCES01040261    JAR46062.1    AAEX03013491    AAEX03013492    AEMK02000085    GDIQ01136925    JAL14801.1   
Pfam
PF02782   FGGY_C        + More
PF00370   FGGY_N
Interpro
IPR018484   Carb_kinase_FGGY_N        + More
IPR018485   Carb_kinase_FGGY_C       
IPR042024   D-XK_euk       
IPR000577   Carb_kinase_FGGY       
PDB
4BC5     E-value=1.2012e-115,     Score=1067

Ontologies

Topology

Length:
529
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.379500000000002
Exp number, first 60 AAs:
0
Total prob of N-in:
0.01545
outside
1  -  529
 
 

Population Genetic Test Statistics

Pi
244.975208
Theta
171.507131
Tajima's D
2.29801
CLR
0.373641
CSRT
0.923153842307885
Interpretation
Uncertain
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