Gene

KWMTBOMO03243

Pre Gene Modal

BGIBMGA013616

Annotation

cadherin-like_membrane_protein_precursor_[Bombyx_mori]

Location

Bomo_Chr6(-):2267302-2311578      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.16 Nuclear   Reliability : 1.52 PlasmaMembrane   Reliability : 1.533

CDS

ATGGGAGTTGACGTTCGAATTCTAGCTACACTACTTCTAATCTATGCAGAAACTGTATTGGCTCAAGAAAGATGCGGCTTCATGGTTGCCATACCCAGACCACCAAGGCCGGATCTGCCTGAACTAGACTTCGAAGGTCAAACCTGGAGTCAAAGACCACTAATACCGGCGGCAGACCGCGAAGATGTCTGCATGGACGGTTACCACGCGATTACACCTACCTACGGAACTCAGATTATTTACATGGAAGAAGAGATAGAAGGAGAAGTACCCATCGCCAAACTCAATTACCGCGGTCCAAATGTACCATACATTGAGCCAGCATTTCTGTCTGGTTCTTTCAATCTACTCGTGCCCGTTATCCGCAGGATACCAGATAGTAATGGAGAATGGCACCTTATTATTACTCAGAGACAAGATTACGAAACTCCTGGAATGCAGCAGTATGTGTTCAACATCAGGATAGATGGGGAGACATTGGTTGCGGGTGTTTCACTGCTGATTGTCAATATTGACGACAATGCACCGATTATTCAAGCACTTGAACCGTGTCAAGTTGACGAACTAGGGGAAGCTCGTCTGACTGAGTGTGTGTACGTCGTAACTGATGCCGATGGCCGCATCAGCACCCAGTTCATGCAGTTTAGGATCGACAGCGATCGAGGAGACGACAAGATCTTCTACATCCAAGGGGCAAACATTCCGGGCGAATGGATCCGAATGACAATGACCGTTGGCATCAATGAACCGTTAAATTTCGAGACTAATCCACTACATATATTCTCTGTGACCGCTTTGGACTCTCTCCCAAACACTCACACTGTGACGCTTATGGTCCAAGTAGAGAATGTGGAACATCGGCCGCCTCGATGGGTAGAGATCTTCGCTGTACAACAATTCGATGAGAAAACTGCTCAGAGCTTCCCTGTAAGAGCTATCGACGGAGATACAGGCATCAACAAACCTATCCACTACAGACTGGAAACAGCAGAAGAAGATACGTTTTTTCACATTCGCACCATCGAGGGGGGTCGTAGCGGCGCCATATTATACGTAGATCCAATAGACAGGGACACATTACAAAGAGAAGTGTTTCAATTATCCATAATCGCGTATAAATACGACAACGAATCTTCAGCTACGGCAGCCAACGTTGTCATAATAGTCAACGATATAAACGACCAAAGACCAGAACCTTTGTTCAAAGAGTATCGTTTGAACATAATGGAAGAGACAGCTTTGACGTTGAACTTCGATCAGGAATTCGGATTCCATGATAGAGATCTGGGTCAAAACGCACAATACACCGTGAGGCTAGAGAGCGATTATCCACCAGACGTGGCGAAAGCCTTTTACATAGCACCCGAAGTTGGCTATCAGCGACAGACCTTCATCATGGGGACAGCTAACCATAAAATGCTCGATTATGAAGTTCCAGAATTTCAACGGATCAGGTTGCGGGTAATAGCAACAGACATGGACAATGAAGAACACGTCGGGGTTGCGTATGTGTACATCAATCTTATTAACTGGAATGATGAAGAGCCTATTTTTGAACATAGCGTACAAAACGTTTCCTTCAAGGAAACTGAAGGGAAGGGATTTTTCGTGGCTAATGTAAGAGCCCACGACAGAGACATTGATGACAGAGTTGAACACACATTAATGGGAAACGCGAATAATTATCTCTCGATAGATAAGGACACAGGGGACATTCATGTCACGCAGGACGACTTCTTTGACTATCACCGACAAAGCGAACTTTTTGTTCAGGTCAGAGCTGACGACACCCTGGGGGAACCATTTCACACGGCGACTTCTCAGCTGCTGATCCATCTGGAAGATATAAACAACACCCCTCCTACTCTGAGATTGCCGCGCGGCAGTCCTAATGTCGAAGAGAATGTCCCCGAAGGCTACATCATCACAAGTGAGATCCGAGCCACCGATCCTGACACTACGGCTGAACTGCGCTTCGAAATCGACTGGACCACTTCCTACGCAACCAAACAAGGCAGGGAAGCTAATCCTATTGAATTTCACAATTGTGTCGAGATCGAAACAATATATCCTGCGATCAACAACCGTGGCTCGGCTATAGGACGCCTCGTCGTCAAAAAAATCAGGGAGAACGTCACAATTGACTACGAAGAGTTCGAGATGTTGTATCTGACGGTCAGAGTGCGGGACCTTAACACTGTTATCGGGGATGATTATGATGAATCAACCTTCACCATCACAATCATCGATATGAACGATAATCCCCCGATATGGGTCCCAGGAACACTGGAGCAGTCGCTGCGGGTTCGGGAAATGTCAGACGCTGGTGTCGTGATTGGGACTCTGACGGCCACTGACATCGACGGACCACTCTACAATCAAGTGCGATACACTATGAAGGCAAACGAAGGCACACCAGAGGATCTATTGATGATCGACTTCTACACTGGTCAGATCACGGTGAAAACAAGCGGCGCAATAGATGCTGATGTTCCACGGAGATACAACCTATACTACACTGTGGTGGCCACTGATCGGTGCTACGCTGAAGACCCAGACGATTGCCCTGACGACCCAACTTATTGGGAAACTCCCGGCCAAGTCGTGATACAAATCATAGATACTAACAACAAAATACCTCAACCTGAAACCGACCAATTTAAGGCGGTCGTGTATATTTACGAAGATGCTGTGTCTGGAGATGAGGTTGTCAAAGTTATTGGTAGCGATTTGGATAGAGATGATATTTACCACACAATTCGTTACCAAATCAACTACGCCGTGAATCCTCGTCTGCGTGACTTCTTCGCTGTTGATCCGGATACGGGAAGAGTGTACGTTTACTACACCACCGATGAGGTCCTCGACCGGGACGGGGACGAACCCCAACACAGGATCTTCTTTAATCTCATCGATAACTTCTTCCAGCAAGGAGACGGCAACAGAAACCAAAATGATGCCGAAGTACTAGTCGTACTTCTTGATGTGAACGACAATGCTCCAGAGCTTCCAGAACCCGATGAACTGTCATGGTCGGTGTCTGAAAGTTTAACTAAGGGTACGCGTCTCCAGCCACACATATACGCACCTGATAGAGACGAACCTGACACGGACAACTCTCGGGTCGGATACGCCATCATCAGCCTCACGATCGCCAACAGGGAAATCGAAGTCCCAGAGCTTTTCACCATGATACAGATACAAAACGTCACAGGAGAACTGGAAACCGCCATGGACTTGAGAGGCTATTGGGGAACTTATGCTATTCATATTAAAGCCTACGACCACGGCATCCCGCAGCAGATGTCCAATGAAACGTACGAGCTCGTGATTCGTCCTTACAACTTCCACGCTCCTGTTTTTGTGTTTCCTAAACACGGAGCTACTCTTCGACTGGCCAGGGAGAGGGCTGTCGTCAACGGTTTGCTGGCAACGGTAGACGGTGAATTCCTTAATCGCATCGTCGCTACCGATGAAGACGGGCTACATGCTGGACAAGTTGCCTTCGAAGTGGTTGGTGATACTGAAGCCGTCGATTATTTCCACATTGTCAACGACGGGGAGAACAGTGGCACTCTGATGCTGAAACAACTCTTCCCCGAAGACATAAGAGAATTTGAGGTGACGATACGTGCTACTGACGGCGGGACAGAACCAAGACCGCTCTCCACGGATTGCACCTTCAGTGTGGTGTTCGTGCCGATACAAGGAGAACCTATCTTCCCTACGTCGACTCACACTGTTGCTTTCATTGAAAAAGAAGCGGGCCTTTTGGAACGTCATGAGCTGCCGCGTGCTGAGGATCGGAAAAACCATCTTTGCAGTGATGATTGTCACAATATCTACTATAGGATAGTTGATGGAAATAATGACGGCCACTTTGGACTCGACGAAATTACGAACGTTCTATTCCTGGTAAAGGAATTGGATCGGAGTGTCAGCGAAACGTATACATTGACGATAGCTGCCAGCAACTCACCGACAGGCGGAATCGCTCTAACCTCTACAATAACCATCACCGTTAATGTGAGAGAGGCAGATCCCCAGCCGTACTTCGTCAGAGATTTGTACACGGCTGGCATCTCCACTTCGGATTCAATCAACAGAGAACTGTTGATTTTACAGGCGACACATTCAGAAAACGCACCGATAATCTACACGATAGACTTGTCGACGATGGTAACTGATCCTACCCTGGCCTCCGTCAGGGAGACAGCCTTCATACTTAACCCACATACCGGTGTACTGACTCTTAACATCCAGCCCACTGCGTCCATGCACGGAATGTTCGAATTCCAAGTCGTGGCCACGGATCCAGCTGGCTACAGTGATAGAGCAAATGTCAAGATCTACTTGATCTCCACAAGAAACCGCGTCTTCTTCTTGTTTGTTAACACTTTAGAACAAGTCGAGCAGAACACTGACTTCATAGCACAAACCTTTTCCGCCGGCTTCGAGATGACGTGTAACATCGACCAAGTCGTTCCGGCCACTGACGCCAGCGGGGTCATCATGAACGGCATCACCGAAGTGAGGGGACACTTCATCCGCGATAATGTGCCCGTACCAGCCGACGAGATCGAGACTCTCCGAGGGGACATGGTGCTGCTGACTGCCATCCAGTCCACGCTGGCGACGCGGCTGCTAGTGCTGCGGGACCTCTTCACGGACACCAGTCCGGCGCCGGACGCCGGCTCGGCCGCGGTGCTGTACGCGCTGGCGGTCCTCTCCGCTCTCCTGGCTGCGCTCTGTCTCCTGCTGCTAGTCATCTTCATCATAAGGACTAAAAAACTTAACCGTCGTTTGGAAGCCCTGACGGTTAAGAAGTACGGATCGGTAGATTCAGGTTTGAACCGCGTCGGCATCGCGGCGCCGGGCACCAATAAACATGCCGTGGAAGGCTCCAATCCGATCTGGAACGAGACCATTAAAGCCCCGGACTTCGATTCTATGAGCGATGCATCGAACGACTCTGATCTAATCGGCATTGAAGATCTGCCACACTTCGGCGAAAATAATTATTTCCCTCATGACTTCGATGAAATGAAAACTGATAAGCCCGAAGACATAGTGGCAACACACAACAACAATTTCGGCTTCAAATCAACACCCTTCAGTCCGGAATTTGCAAATCAATTCCAGAAATAA

Protein

MGVDVRILATLLLIYAETVLAQERCGFMVAIPRPPRPDLPELDFEGQTWSQRPLIPAADREDVCMDGYHAITPTYGTQIIYMEEEIEGEVPIAKLNYRGPNVPYIEPAFLSGSFNLLVPVIRRIPDSNGEWHLIITQRQDYETPGMQQYVFNIRIDGETLVAGVSLLIVNIDDNAPIIQALEPCQVDELGEARLTECVYVVTDADGRISTQFMQFRIDSDRGDDKIFYIQGANIPGEWIRMTMTVGINEPLNFETNPLHIFSVTALDSLPNTHTVTLMVQVENVEHRPPRWVEIFAVQQFDEKTAQSFPVRAIDGDTGINKPIHYRLETAEEDTFFHIRTIEGGRSGAILYVDPIDRDTLQREVFQLSIIAYKYDNESSATAANVVIIVNDINDQRPEPLFKEYRLNIMEETALTLNFDQEFGFHDRDLGQNAQYTVRLESDYPPDVAKAFYIAPEVGYQRQTFIMGTANHKMLDYEVPEFQRIRLRVIATDMDNEEHVGVAYVYINLINWNDEEPIFEHSVQNVSFKETEGKGFFVANVRAHDRDIDDRVEHTLMGNANNYLSIDKDTGDIHVTQDDFFDYHRQSELFVQVRADDTLGEPFHTATSQLLIHLEDINNTPPTLRLPRGSPNVEENVPEGYIITSEIRATDPDTTAELRFEIDWTTSYATKQGREANPIEFHNCVEIETIYPAINNRGSAIGRLVVKKIRENVTIDYEEFEMLYLTVRVRDLNTVIGDDYDESTFTITIIDMNDNPPIWVPGTLEQSLRVREMSDAGVVIGTLTATDIDGPLYNQVRYTMKANEGTPEDLLMIDFYTGQITVKTSGAIDADVPRRYNLYYTVVATDRCYAEDPDDCPDDPTYWETPGQVVIQIIDTNNKIPQPETDQFKAVVYIYEDAVSGDEVVKVIGSDLDRDDIYHTIRYQINYAVNPRLRDFFAVDPDTGRVYVYYTTDEVLDRDGDEPQHRIFFNLIDNFFQQGDGNRNQNDAEVLVVLLDVNDNAPELPEPDELSWSVSESLTKGTRLQPHIYAPDRDEPDTDNSRVGYAIISLTIANREIEVPELFTMIQIQNVTGELETAMDLRGYWGTYAIHIKAYDHGIPQQMSNETYELVIRPYNFHAPVFVFPKHGATLRLARERAVVNGLLATVDGEFLNRIVATDEDGLHAGQVAFEVVGDTEAVDYFHIVNDGENSGTLMLKQLFPEDIREFEVTIRATDGGTEPRPLSTDCTFSVVFVPIQGEPIFPTSTHTVAFIEKEAGLLERHELPRAEDRKNHLCSDDCHNIYYRIVDGNNDGHFGLDEITNVLFLVKELDRSVSETYTLTIAASNSPTGGIALTSTITITVNVREADPQPYFVRDLYTAGISTSDSINRELLILQATHSENAPIIYTIDLSTMVTDPTLASVRETAFILNPHTGVLTLNIQPTASMHGMFEFQVVATDPAGYSDRANVKIYLISTRNRVFFLFVNTLEQVEQNTDFIAQTFSAGFEMTCNIDQVVPATDASGVIMNGITEVRGHFIRDNVPVPADEIETLRGDMVLLTAIQSTLATRLLVLRDLFTDTSPAPDAGSAAVLYALAVLSALLAALCLLLLVIFIIRTKKLNRRLEALTVKKYGSVDSGLNRVGIAAPGTNKHAVEGSNPIWNETIKAPDFDSMSDASNDSDLIGIEDLPHFGENNYFPHDFDEMKTDKPEDIVATHNNNFGFKSTPFSPEFANQFQK

Uniprot

Q9XY09   Q9NDN4   Q9NDN5   Q9NDN3   Q9GPJ9   Q8MZK3   + More
Q95WK9   A0A194Q387   A0A2L1K5D3   Q5QD53   Q963J6   A0A2W1BFZ7   H6VN79   H6VN81   Q09EX8   D1M7U8   A0A2S1XAY0   A0A1B0RHP4   D1M7V0   D1M7U7   D1M7U9   H6VN78   H6VN80   Q09EX6   H6VN76   Q8MUL5   Q09EX9   H6VN75   H6VN77   A0A1B0RHM4   Q6V4I2   Q19KJ3   C3S778   Q09EX7   Q07DV0   C0J8Z4   A0A286R830   A7LIA2   A1DYI4   R4HHT6   D1LU98   Q6IZ03   Q5Y0J9   Q6DT47   D1LU99   G8XP55   A0A2H4KNR4   Q86DU3   A0A060BIM6   A0A060BFA9   A0A060BQ11   H9AWT9   A0A060BPA7   J7JUM9   A0A060BQ05   A0A1E1W2I0   J7K292   F6KNK3   F6KNK4   A0A060BJC8   Q64F52   A0A060BFB6   I2BF57   A0A060BJD3   A0A060BIN5   B1NJ42   F8UX45   J7EMA0   Q64F51   A0A0C5XCH4   E7EC34   A0A212EM19   I0E1Y1   D5LGN0   I6PGA6   A0A0N0PCA3   S5VXI8   Q0PKF9   Q86DP8   G0ZL60   A0A060BIP0   A0A2H1VDJ1   A0A060BFD2   A0A2H4G8P0   R4I3I6   A0A2S1XAX9   K9JDQ8   J7EQ02   F5ANZ0   H6VN74   A0A060BIP5   Q09EY8   Q09GE9   Q5GI53   Q09GE8   A0A060BQ30   A0A060BPC8   A0A060BFC6  

Pubmed

9614703    11210135    12213239    15123702    11304752    26354079    + More
29422629    15572369    11486086    28756777    22689968    20079435    29408651    16248428    16935222    16905280    15681223    15691952    12695565    24840729    22530065    23754724    22118469    23835184    24055650    21840855    21844358    15926902   

EMBL

AB026260    BAA77212.1    AB041509    BAA99405.1    AB041508    BAA99404.1    + More
AB041510    BAA99406.1    AF319973    AAG37912.1    AY094541    AAM21151.1    AF317621    AAL26896.1    KQ459579    KPI99469.1    MF929076    AVE17268.1    AY692445    AAV80768.1    AF367362    AAK85198.1    KZ150071    PZC74039.1    JN836548    AFB74172.1    JN836550    AFB74174.1    DQ973293    ABI55357.1    GU120237    ACZ06063.1    MF375236    AWJ76614.1    KM360193    AKH49609.1    GU120239    ACZ06065.1    GU120236    ACZ06062.1    GU120238    ACZ06064.1    JN836547    AFB74171.1    JN836549    AFB74173.1    DQ973295    ABI55359.1    JN836545    AFB74169.1    AF519180    AAM69351.2    DQ973292    ABI55356.1    JN836544    AFB74168.1    JN836546    AFB74170.1    KM360189    AKH49605.1    AY351904    AAQ54935.1    DQ523166    ABF69362.1    EU672824    ACF94775.1    DQ973294    ABI55358.1    DQ000165    AAY44392.1    FJ011674    ACK37449.1    KY471551    ASV70529.1    EU022587    ABS59299.1    EF068248    ABL10442.1    HQ636625    AEL22856.1    GU059585    ACY69030.1    AY612336    AAT37678.1    AY714876    AAU50668.1    AY647974    AAT67416.1    GU059586    ACY69031.1    EU025853    ABV74206.1    MF276974    ASX13586.1    AY198374    AAP30715.1    KJ480752    AIA80582.1    KJ480751    AIA80581.1    KJ480754    AIA80584.1    JN898956    AFC17899.1    KJ480753    AIA80583.1    JX233820    AFQ60152.1    KJ480749    AIA80579.1    GDQN01009871    JAT81183.1    JX233819    AFQ60151.1    HQ453270    AEE44121.1    HQ453271    AEE44122.1    KJ480750    AIA80580.1    AY713483    AAU25882.1    KJ480756    AIA80586.1    JQ279500    AFJ52160.1    KJ480755    AIA80585.1    KJ480762    AIA80592.1    EF541176    ABU41413.1    JF951432    AEI61920.1    HM116243    AEB97395.1    AY713485    AAU25884.1    KM370099    AJR19335.1    HQ647122    ADV17664.2    AGBW02013959    OWR42519.1    JQ365181    AFH96949.1    GU901158    ADD92322.1    JF979064    AFI81418.1    KQ460650    KPJ13134.1    KC907716    AGS80251.1    DQ821523    ABG91735.2    AY118272    AAM78590.1    JF303656    AEA29692.1    KJ480767    AIA80597.1    ODYU01001789    SOQ38472.1    KJ480771    AIA80601.1    KU254194    APT67993.1    JN687590    AFJ04291.1    MF375235    AWJ76613.1    GU474636    ADK60914.1    HM116244    AEB97396.1    HQ441197    AEC33256.1    JN836543    AFB74167.1    KJ480772    AIA80602.1    DQ973283    ABI55347.1    DQ915198    ABI63545.1    AY529117    AAS98023.1    DQ915199    ABI63546.1    KJ480769    AIA80599.1    KJ480768    AIA80598.1    KJ480766    AIA80596.1   

Proteomes

UP000053268    UP000007151    UP000053240   

PRIDE

Q9XY09    Q9NDN4    Q9NDN5    Q9NDN3   

Pfam

PF00028   Cadherin        + More
PF01217   Clat_adaptor_s

Interpro

IPR002126   Cadherin-like_dom        + More
IPR015919   Cadherin-like_sf       
IPR020894   Cadherin_CS       
IPR011012   Longin-like_dom_sf       
IPR022775   AP_mu_sigma_su       
IPR000804   Clathrin_sm-chain_CS       
IPR039808   Cadherin       

SUPFAM

SSF49313   SSF49313        + More
SSF64356   SSF64356       

ProteinModelPortal

Q9XY09   Q9NDN4   Q9NDN5   Q9NDN3   Q9GPJ9   Q8MZK3   + More
Q95WK9   A0A194Q387   A0A2L1K5D3   Q5QD53   Q963J6   A0A2W1BFZ7   H6VN79   H6VN81   Q09EX8   D1M7U8   A0A2S1XAY0   A0A1B0RHP4   D1M7V0   D1M7U7   D1M7U9   H6VN78   H6VN80   Q09EX6   H6VN76   Q8MUL5   Q09EX9   H6VN75   H6VN77   A0A1B0RHM4   Q6V4I2   Q19KJ3   C3S778   Q09EX7   Q07DV0   C0J8Z4   A0A286R830   A7LIA2   A1DYI4   R4HHT6   D1LU98   Q6IZ03   Q5Y0J9   Q6DT47   D1LU99   G8XP55   A0A2H4KNR4   Q86DU3   A0A060BIM6   A0A060BFA9   A0A060BQ11   H9AWT9   A0A060BPA7   J7JUM9   A0A060BQ05   A0A1E1W2I0   J7K292   F6KNK3   F6KNK4   A0A060BJC8   Q64F52   A0A060BFB6   I2BF57   A0A060BJD3   A0A060BIN5   B1NJ42   F8UX45   J7EMA0   Q64F51   A0A0C5XCH4   E7EC34   A0A212EM19   I0E1Y1   D5LGN0   I6PGA6   A0A0N0PCA3   S5VXI8   Q0PKF9   Q86DP8   G0ZL60   A0A060BIP0   A0A2H1VDJ1   A0A060BFD2   A0A2H4G8P0   R4I3I6   A0A2S1XAX9   K9JDQ8   J7EQ02   F5ANZ0   H6VN74   A0A060BIP5   Q09EY8   Q09GE9   Q5GI53   Q09GE8   A0A060BQ30   A0A060BPC8   A0A060BFC6  

PDB

3Q2W     E-value=6.71646e-16,     Score=211

KEGG

751082    no KO assigned | (RefSeq) Btr175; cadherin-like membrane protein

GO

GO:0016021   GO:0005509   GO:0007156   GO:0005886   GO:0030117   GO:0006886   GO:0016192   GO:0016020   GO:0007155   GO:0003678   GO:0005634   GO:0006270   GO:0042555   GO:0048384  

PANTHER

PTHR24027  

SignalP

Position:   1 - 21,         Likelihood:  0.959435

 

 

Length:

1715

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

23.79202

Exp number, first 60 AAs:

0.64209

Total prob of N-in:

0.03596

outside

1  -  1569

TMhelix

1570  -  1592

inside

1593  -  1715

 

 

Pi

273.201186

Theta

174.188479

Tajima's D

1.388456

CLR

0.536246

CSRT

0.75961201939903

Interpretation

Uncertain