Gene

KWMTBOMO03242

Pre Gene Modal

BGIBMGA013620

Annotation

PREDICTED:_potassium/sodium_hyperpolarization-activated_cyclic_nucleotide-gated_channel_3-like_[Bombyx_mori]

Location

Bomo_Chr6(-):2254691-2255648      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.411 Extracellular   Reliability : 1.213

CDS

ATGATCGTTAAGCTATCTATGGGTGCTATTTTACTTGTGACGTACGTTTTTTTTTTAAATATTCTTACAGAGGAACTTCGCAATGAAATAACGCTACACACATGCCGCGTTCTAGTGGATAAGGTTACTTTATTCAAGGATGTGCCGGCATCAGCAGTGGGCTCAGTACTAGGCTGCTTGAAGCCTGAAGTGTACCTCCCTAATGACCCTGTGCTCAGGGCTGGTGACGACGGAAATTGCATGTACTTTATTGATTACGGCACTGTGGCAATTTATTCCCTTAAAGGCGTCGAAGTGTGCCATCTAGAAGACGGTGCCCATTTTGGTGAGGTTGCTCTGCTGATGAGGGACAGCAAGCGTTTGGTTACCGTTGTTGCTGTGGAGATCACGCAACTGTACCGTCTAGATGATATTGATTTTAGGTTAAAAAAATATTCTTAA

Protein

MIVKLSMGAILLVTYVFFLNILTEELRNEITLHTCRVLVDKVTLFKDVPASAVGSVLGCLKPEVYLPNDPVLRAGDDGNCMYFIDYGTVAIYSLKGVEVCHLEDGAHFGEVALLMRDSKRLVTVVAVEITQLYRLDDIDFRLKKYS

Similarity

Belongs to the type-B carboxylesterase/lipase family.

Uniprot

H9JVQ7   A0A2H1WL32   A0A2A4J6K2   A0A2W1BGU2   A0A0N0PCM6   A0A194Q2B6   + More
A0A0L7LQ77   A0A195E5U7   A0A195CGQ6   A0A0J7P2D8   A0A195F932   A0A195BGT2   E2BQ05   A0A151XIB6   A0A154P634   F4WAI5   K7J6S6   E2ANY3   A0A158N9T5   E9IP64   A0A0L7R5Z4   A0A026WH82   A0A232EL75   A0A0N0U645   A0A026VSI5   A0A3L8DP94   A0A158NCR1   A0A151I305   A0A026WA09   K7J258   A0A232F4N6   D6WT74   A0A0J7NVX2   A0A087ZRP0   A0A2A3EP37   A0A1W4X4S7   A0A2A3EJ42   F4WYR5   A0A2P8YLJ9   E2BHR0   E2A4D3   D6WY22   A0A088A5T8   A0A0N0U649   A0A1Y1K5W3   A0A151J9I8   N6TWL1   A0A0T6AXX9   A0A151XCQ2   A0A1W4W4A9   A0A195F9W0   D6WKC6   A0A1Q3FTA3   B0W500   A0A1Q3FT94   A0A1J1IAE3   A0A026W5W6   W5JGC1   A0A182F319   A0A084WQK7   A0A3L8DM47   Q7PWG3   A0A139WD60   A0A182I7I5   A0A182WXM1   A0A182NUP2   A0A182K1L9   A0A1S4GZT2   A0A182G7P4   A0A182UWA3   A0A182QEK8   A0A182UI53   A0A182G1D1   A0A182WGB9   Q17NI2   A0A182J241   A0A182RZB6   A0A0L7LDZ2   A0A182SPH6   A0A154P6J3   A0A1J1J7D3   D6WUM2   A0A182LVE4   A0A182Y0H6   A0A182LMK1   A0A1W4XAE8   A0A182PVU4   A0A2A3E7T9   A0A154P1P2   A0A0T6BGX1   A0A088AMC0   A0A026X0X4   A0A1W4WTK1   A0A0L7RIH6   A0A151JUE4   A0A151J128   F4WHP0   A0A195C056   A0A310SFW5  

Pubmed

19121390    28756777    26354079    26227816    20798317    21719571    + More
20075255    21347285    21282665    24508170    28648823    30249741    18362917    19820115    29403074    28004739    23537049    20920257    23761445    24438588    12364791    26483478    17510324    25244985    20966253   

EMBL

BABH01032353    BABH01032354    BABH01032355    ODYU01009332    SOQ53676.1    NWSH01003045    + More
PCG67052.1    KZ150071    PZC74038.1    KQ460542    KPJ14111.1    KQ459579    KPI99478.1    JTDY01000347    KOB77597.1    KQ979592    KYN20570.1    KQ977791    KYM99904.1    LBMM01000311    KMR01417.1    KQ981727    KYN36717.1    KQ976476    KYM83868.1    GL449694    EFN82193.1    KQ982093    KYQ60087.1    KQ434814    KZC06814.1    GL888050    EGI68743.1    AAZX01004561    GL441439    EFN64815.1    ADTU01009440    ADTU01009441    GL764458    EFZ17642.1    KQ414648    KOC66239.1    KK107211    EZA55318.1    NNAY01003632    OXU19078.1    KQ435737    KOX76932.1    KK111113    EZA46476.1    QOIP01000005    RLU22254.1    ADTU01011545    KQ976508    KYM82744.1    KK107366    EZA51864.1    NNAY01001059    OXU25307.1    KQ971354    EFA07174.2    LBMM01001307    KMQ96540.1    KZ288202    PBC33525.1    KZ288229    PBC31708.1    GL888463    EGI60569.1    PYGN01000510    PSN45113.1    GL448324    EFN84743.1    GL436635    EFN71680.1    KQ971362    EFA08934.1    KQ435756    KOX75882.1    GEZM01091493    JAV56832.1    KQ979425    KYN21613.1    APGK01052223    KB741211    KB632263    ENN72781.1    ERL90913.1    LJIG01022532    KRT80080.1    KQ982298    KYQ58127.1    KYN37218.1    KQ971342    EFA03600.1    GFDL01004215    JAV30830.1    DS231840    EDS34566.1    GFDL01004214    JAV30831.1    CVRI01000044    CRK96540.1    KK107390    EZA51460.1    ADMH02001604    ETN61869.1    ATLV01025637    KE525396    KFB52501.1    QOIP01000007    RLU20898.1    AAAB01008984    EAA15123.4    KQ971361    KYB25880.1    APCN01003407    JXUM01046704    KQ561488    KXJ78421.1    AXCN02000736    JXUM01038229    KQ561157    KXJ79519.1    CH477199    EAT48234.1    JTDY01001514    KOB73682.1    KQ434826    KZC07443.1    CVRI01000075    CRL08307.1    KQ971357    EFA08494.1    AXCM01004588    KZ288340    PBC27768.1    KQ434796    KZC05742.1    LJIG01000397    KRT86543.1    KK107046    EZA61728.1    KQ414584    KOC70603.1    KQ981842    KYN35002.1    KQ980586    KYN15234.1    GL888167    EGI66247.1    KQ978501    KYM93551.1    KQ761619    OAD57321.1   

Proteomes

UP000005204    UP000218220    UP000053240    UP000053268    UP000037510    UP000078492    + More
UP000078542    UP000036403    UP000078541    UP000078540    UP000008237    UP000075809    UP000076502    UP000007755    UP000002358    UP000000311    UP000005205    UP000053825    UP000053097    UP000215335    UP000053105    UP000279307    UP000007266    UP000005203    UP000242457    UP000192223    UP000245037    UP000019118    UP000030742    UP000002320    UP000183832    UP000000673    UP000069272    UP000030765    UP000007062    UP000075840    UP000076407    UP000075884    UP000075881    UP000069940    UP000249989    UP000075903    UP000075886    UP000075902    UP000075920    UP000008820    UP000075880    UP000075900    UP000075901    UP000075883    UP000076408    UP000075882    UP000075885   

PRIDE

H9JVQ7   

Pfam

PF00027   cNMP_binding        + More
PF00520   Ion_trans
PF08412   Ion_trans_N
PF00135   COesterase
PF07885   Ion_trans_2

Interpro

IPR018490   cNMP-bd-like        + More
IPR014710   RmlC-like_jellyroll       
IPR000595   cNMP-bd_dom       
IPR018488   cNMP-bd_CS       
IPR005821   Ion_trans_dom       
IPR013621   Ion_trans_N       
IPR019819   Carboxylesterase_B_CS       
IPR002018   CarbesteraseB       
IPR019826   Carboxylesterase_B_AS       
IPR029058   AB_hydrolase       
IPR013099   K_chnl_dom       

SUPFAM

SSF51206   SSF51206        + More
SSF53474   SSF53474       

Gene 3D

2.60.120.10     3.40.50.1820    

CDD

cd00038  CAP_ED

ProteinModelPortal

H9JVQ7   A0A2H1WL32   A0A2A4J6K2   A0A2W1BGU2   A0A0N0PCM6   A0A194Q2B6   + More
A0A0L7LQ77   A0A195E5U7   A0A195CGQ6   A0A0J7P2D8   A0A195F932   A0A195BGT2   E2BQ05   A0A151XIB6   A0A154P634   F4WAI5   K7J6S6   E2ANY3   A0A158N9T5   E9IP64   A0A0L7R5Z4   A0A026WH82   A0A232EL75   A0A0N0U645   A0A026VSI5   A0A3L8DP94   A0A158NCR1   A0A151I305   A0A026WA09   K7J258   A0A232F4N6   D6WT74   A0A0J7NVX2   A0A087ZRP0   A0A2A3EP37   A0A1W4X4S7   A0A2A3EJ42   F4WYR5   A0A2P8YLJ9   E2BHR0   E2A4D3   D6WY22   A0A088A5T8   A0A0N0U649   A0A1Y1K5W3   A0A151J9I8   N6TWL1   A0A0T6AXX9   A0A151XCQ2   A0A1W4W4A9   A0A195F9W0   D6WKC6   A0A1Q3FTA3   B0W500   A0A1Q3FT94   A0A1J1IAE3   A0A026W5W6   W5JGC1   A0A182F319   A0A084WQK7   A0A3L8DM47   Q7PWG3   A0A139WD60   A0A182I7I5   A0A182WXM1   A0A182NUP2   A0A182K1L9   A0A1S4GZT2   A0A182G7P4   A0A182UWA3   A0A182QEK8   A0A182UI53   A0A182G1D1   A0A182WGB9   Q17NI2   A0A182J241   A0A182RZB6   A0A0L7LDZ2   A0A182SPH6   A0A154P6J3   A0A1J1J7D3   D6WUM2   A0A182LVE4   A0A182Y0H6   A0A182LMK1   A0A1W4XAE8   A0A182PVU4   A0A2A3E7T9   A0A154P1P2   A0A0T6BGX1   A0A088AMC0   A0A026X0X4   A0A1W4WTK1   A0A0L7RIH6   A0A151JUE4   A0A151J128   F4WHP0   A0A195C056   A0A310SFW5  

PDB

3U11     E-value=4.83946e-15,     Score=191

KEGG

101743451    no KO assigned | (RefSeq) potassium/sodium hyperpolarization-activated cyclic nucleotide-gated chann

GO

GO:0016021   GO:0005216   GO:0052689   GO:0005615  

Length:

146

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

15.48873

Exp number, first 60 AAs:

15.45715

Total prob of N-in:

0.33104

POSSIBLE N-term signal

sequence

outside

1  -  4

TMhelix

5  -  22

inside

23  -  146

 

 

Pi

188.60809

Theta

169.657641

Tajima's D

0.18176

CLR

0

CSRT

0.425228738563072

Interpretation

Uncertain