Gene

KWMTBOMO03236  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA013624

Annotation

PREDICTED:_suppressor_of_SWI4_1_homolog_[Papilio_xuthus]

Location

Bomo_Chr6(-):2210825-2219448      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 4.187

CDS

ATGGGGAAACGTAAAGGAAAATGCGTGAAGAAGAATTCCGCAAGTAAAGAAGCTTTGGAGCCTGAAAACCTAGTGAAAGCGCCACATTCGTTCGTGATTCACAGAGGGCAATGTAGCAAGGACCTCGTAGACTTAACTAGAGACTTCAGAAAGATCATGGAACCTTTCACTGCTTCACAATTAAAAGAACGCAAGAAAAATACAATTAAAGATTTTGTGTCCATATCTGGTTATCTTCATGTATCACACATGGTCCTTTTTACGGAAACTGAACTTGGTTCTTACATGAGACTTGCCAGACTACCTCGAGGGCCTACACTAACTTTTAAAATACACAATTACAGTTTAGCTCGTGATGTAATATCTTCACTGAAAAAACAATATGTGATGATGCGTGCCTTCCAAAATGCACCTCTCATTGTGCTAAACACCTTCTCTGGTGAAGGCATGCACATGAAACTTATGGCCACAATGTTTCAAAATATGTTTCCAACAATTAATATTACTACTGTAAAACTAAAAAATATAAGGAGATGTGTATTAATGAACTACAATCCGTCCACAAAACTAATAGATATGAGGCATTATGTAATTAGGGCAACACCGGTTGGACTTAATAAAGGAACTAAAAAGGTGGTCCAAGGCAAAATACCAAACTTGAACCGATGTAAAGATATGTCCGAGTTCTTTGACAAAGCGGGCTTGCTATCTGAGAGTGAGTTCGAGGATGATCCAAATTCTCAAATAGTTCTTCCACAAAGTCTGGCGTCGAGGGGAGCAGCCGTTGATTCTAAATCAGCTATCAGGTTATTTGAGCTCGGACCAAGGATAACATTTCAACTTATAAAGGTTGAAGATGGTCTCATGGATGGTGAAGTTTTATACCATGAGCTTGTAGAAAAAACAGAAGAAGAAAAAGCATTAATTAAAAAGAGAAGAGAGGCGAAGAGACGTCTAAAAGAAAAACGTAAATCGAAACAAGAAGAGAACATTAAGAAGAAGCAGAAAGAAAAAGAAGAACTCAAACAGAAGTCTCTTGAAGGCATTAAGAAGAAGAAAGAATCCACTGAGAGTCAGAGGTTAATGGAACTGGCGGCCGCCGAGTCTCAGAACAATGATCAAGATATGGAGGAAGACGACGACGCTGATTACTACAGACAGGAAGTGGGAGCCGAACCGGAAAAAGATCTGTTCACACCCAACACGTCGAAAAAGAGAAAGGCTGATGACAATTCTGTAAGAGGTTTCAAAAAAATGCGGCTCGACAAGAAATTAAAAAGGAAATATCAGAAAAATCAAGATGGCGGCCAACAGACAAAGAAACAAGGCAACGACAAGAAGTTCCAAAATAAGGATTTCAAAAATAAGAATTCAGGAGATAGAGATAAATTTAGGAATAAAGGTCAGAAGAAAGTGTTTGGAGGGAAAGTTCAGAATAAGTTTAATAAAGGCAGCAAAGGGAGGGAAGGGAAAGGTAGAAAGAACTCCGGCAAAGGAAAAGGGCGGAAATAA

Protein

MGKRKGKCVKKNSASKEALEPENLVKAPHSFVIHRGQCSKDLVDLTRDFRKIMEPFTASQLKERKKNTIKDFVSISGYLHVSHMVLFTETELGSYMRLARLPRGPTLTFKIHNYSLARDVISSLKKQYVMMRAFQNAPLIVLNTFSGEGMHMKLMATMFQNMFPTINITTVKLKNIRRCVLMNYNPSTKLIDMRHYVIRATPVGLNKGTKKVVQGKIPNLNRCKDMSEFFDKAGLLSESEFEDDPNSQIVLPQSLASRGAAVDSKSAIRLFELGPRITFQLIKVEDGLMDGEVLYHELVEKTEEEKALIKKRREAKRRLKEKRKSKQEENIKKKQKEKEELKQKSLEGIKKKKESTESQRLMELAAAESQNNDQDMEEDDDADYYRQEVGAEPEKDLFTPNTSKKRKADDNSVRGFKKMRLDKKLKRKYQKNQDGGQQTKKQGNDKKFQNKDFKNKNSGDRDKFRNKGQKKVFGGKVQNKFNKGSKGREGKGRKNSGKGKGRK

Uniprot

A0A2W1BG27   A0A2A4J5A1   A0A212FKA3   A0A2H1WL87   A0A0N1IHI2   S4NWG0   + More
D6W8M2   A0A2J7QHE9   A0A232F2I0   F4WWW6   A0A195BY66   A0A158NCC8   A0A026WV10   A0A067RCQ8   A0A151IG90   K7IZ67   A0A0J7L325   A0A151WFU5   E2B1W3   A0A2P8XET7   A0A0T6B8K1   A0A088AIC5   E9J841   A0A310SMT2   A0A0L7RDS8   A0A1B6GAG7   A0A1B6KUH2   A0A154P4Y9   A0A1B6IDJ2   A0A0M9A7A9   A0A069DU24   A0A1S3CZV3   R4G3J6   A0A224XPA2   A0A2J7QHD2   A0A0K8THP6   A0A146M915   A0A0A9WJU8   A0A2R5L656   E2BI79   A0A151J5H8   A0A195FAK5   A0A2R7VWI6   A0A0A1WQJ4   A0A034WB35   A0A0M5J1U6   A0A1I8P0S5   B4JFI7   A0A0P5DHR0   A0A0P6IM96   A0A0P4YBK0   E9HQF0   A0A0P4Y3B3   B4LWU8  

Pubmed

28756777    22118469    26354079    23622113    18362917    19820115    + More
28648823    21719571    21347285    24508170    30249741    24845553    20075255    20798317    29403074    21282665    26334808    26823975    25401762    25830018    25348373    17994087    21292972   

EMBL

KZ150071    PZC74032.1    NWSH01003045    PCG67059.1    AGBW02008137    OWR54129.1    + More
ODYU01009332    SOQ53682.1    KQ460542    KPJ14115.1    GAIX01014675    JAA77885.1    KQ971312    EEZ98288.1    NEVH01013976    PNF27996.1    NNAY01001222    OXU24688.1    GL888417    EGI61209.1    KQ976396    KYM92883.1    ADTU01011814    KK107087    QOIP01000001    EZA59852.1    RLU27436.1    KK852785    KDR16561.1    KQ977728    KYN00255.1    LBMM01000915    KMQ97227.1    KQ983211    KYQ46665.1    GL444981    EFN60319.1    PYGN01002421    PSN30520.1    LJIG01009146    KRT83663.1    GL768788    EFZ11018.1    KQ760869    OAD58798.1    KQ414614    KOC68886.1    GECZ01010343    JAS59426.1    GEBQ01024887    JAT15090.1    KQ434820    KZC06996.1    GECU01022712    JAS84994.1    KQ435720    KOX78687.1    GBGD01001276    JAC87613.1    ACPB03009759    GAHY01001621    JAA75889.1    GFTR01006597    JAW09829.1    PNF27995.1    GBRD01000713    JAG65108.1    GDHC01002385    JAQ16244.1    GBHO01034877    JAG08727.1    GGLE01000791    MBY04917.1    GL448457    EFN84610.1    KQ979973    KYN18371.1    KQ981727    KYN37074.1    KK854049    PTY10285.1    GBXI01013150    JAD01142.1    GAKP01007612    JAC51340.1    CP012526    ALC45761.1    CH916369    EDV93468.1    GDIP01157336    JAJ66066.1    GDIQ01002835    LRGB01000512    JAN91902.1    KZS18504.1    GDIP01230787    JAI92614.1    GL732719    EFX66032.1    GDIP01233151    JAI90250.1    CH940650    EDW66669.1   

Proteomes

UP000218220    UP000007151    UP000053240    UP000007266    UP000235965    UP000215335    + More
UP000007755    UP000078540    UP000005205    UP000053097    UP000279307    UP000027135    UP000078542    UP000002358    UP000036403    UP000075809    UP000000311    UP000245037    UP000005203    UP000053825    UP000076502    UP000053105    UP000079169    UP000015103    UP000008237    UP000078492    UP000078541    UP000092553    UP000095300    UP000001070    UP000076858    UP000000305    UP000008792   

Pfam

PF04427   Brix

Interpro

IPR007109   Brix       

ProteinModelPortal

A0A2W1BG27   A0A2A4J5A1   A0A212FKA3   A0A2H1WL87   A0A0N1IHI2   S4NWG0   + More
D6W8M2   A0A2J7QHE9   A0A232F2I0   F4WWW6   A0A195BY66   A0A158NCC8   A0A026WV10   A0A067RCQ8   A0A151IG90   K7IZ67   A0A0J7L325   A0A151WFU5   E2B1W3   A0A2P8XET7   A0A0T6B8K1   A0A088AIC5   E9J841   A0A310SMT2   A0A0L7RDS8   A0A1B6GAG7   A0A1B6KUH2   A0A154P4Y9   A0A1B6IDJ2   A0A0M9A7A9   A0A069DU24   A0A1S3CZV3   R4G3J6   A0A224XPA2   A0A2J7QHD2   A0A0K8THP6   A0A146M915   A0A0A9WJU8   A0A2R5L656   E2BI79   A0A151J5H8   A0A195FAK5   A0A2R7VWI6   A0A0A1WQJ4   A0A034WB35   A0A0M5J1U6   A0A1I8P0S5   B4JFI7   A0A0P5DHR0   A0A0P6IM96   A0A0P4YBK0   E9HQF0   A0A0P4Y3B3   B4LWU8  

PDB

6C0F     E-value=1.09593e-41,     Score=429

KEGG

101738701    K14859 ribosome biogenesis protein SSF1/2 | (RefSeq) protein Peter pan

GO

GO:0030687   GO:0000027   GO:0002164   GO:0007444   GO:0007292  

Length:

503

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

5.09002

Exp number, first 60 AAs:

0

Total prob of N-in:

0.26498

outside

1  -  503

 

 

Pi

237.538019

Theta

178.816507

Tajima's D

0.870026

CLR

0.034101

CSRT

0.623468826558672

Interpretation

Uncertain