Silkworm Genome Informatics Database

Gene

KWMTBOMO03231

Annotation

PREDICTED:_uncharacterized_protein_LOC106136812_[Amyelois_transitella]

Location

Bomo_Chr6(-):2154798-2166898 View in EpiBrowser

Transcription factor

zf-C2H2

Location in the cell

Nuclear Reliability : 4.298

CDS

ATGGATCAATTAATACAATGTCCTGTGTGCACCCTTTACCTTCACAATGGAATGAGTTTGGAATCACATCTCGACACTCACCCCAAGGACCAAGTTATCAAAGCTTTGTGTTGTCTTACCTCAAAAGGCAGTGGTTTCGGCAGTAGAACATCAACTCCTGCAAACTCGGAACGCTCATACAGAAGTCGGTCTCGGACACCTGCAGATGACAGATGGAATGGATCACAGCGAAGCAGTGAACCTGACCGCTACTGGCGAAGGCCACCAAGTAGGACTCCCAAATCAACATCAATTACATCTCTATCACGGAATGAGACACCTGAAATTAGAGATAGTATTAATTTTGACACAAATTCAGTTCCATCAGGTCAGCATTCTTTGTCATATGGATTGAAAAGTGATAAAATGCAACAGTTTCAAAGTTCTCAACTGTCAGATTTTGAACAGCCATTTACAGTGTTTCAAGAACCACAAGAAGATAGAGAGATTAAATATTCACGGAGTGCTGAATATACTGCCATGGATAATGTAAACAATGTTTTAACATATAACATACCACCAATAGCTGCTGGCTTAAGGTTTCCACCGCAAAACAATCTTGTGTCAGCAGGACATAAGAAAGCCCAAGATTTTGTAAAGATTCTACCAAAGCCCAATAACATACTTTTGAAAACCAATGTAGGTGGGATACAGTACATTACATCAGGAGTGAAACCTATGCATGTCATGGTGCCGACAACACCAACATTTGTGCAAAAGAATATACAGAACAACATGCTGATCTCAGGAAATATTTCTAATTCATCAGCCCATATTGATGCTAAAGTTGTAGCTCCACAATTATCAGGCGCCCAATTCAATAACATGTCAACAGGTGCCTTCACTCCCAGTTTATCAACAGTTGTGACTCAAAATTCACAAATAATTTACAGAGAAATGGTGCATAACATAGATGGTAAGCCTTTTATTTCAAGTATGCCCACTATGATTACAACAGGACCGGATGCTGTGACAAACGTAGCACAAAGTAGTTCAATGTATCAGAACTTAATGGTTTTGGATCAATTTGGATCTTGCATGTACACACCACCTCAACAGTTTGTTCCTAAATCGTGTACTACCACTGTTTATACAGACACCGATACCTTAATTCCAAATTCCCAACTGTGTAAAAATAATTTAAATGATCCAAAAACTTTAATCATAGAAGTTGGTCCAATAATTGCTCCTGAATCAGTTTCATCTACCTCTACATCAACCAGTGTGGTGCCATCATCTGGTGTGTCAGTTAAATCTGATGTAACAGATACATCTGACACCATAAATAAACTTGAATACATGAGTGAGGCATCAAGTTCAAGTAAAGGATTAAAAATTCTCAGCAATATCAAGGTTGAAGTACCAGTACAGCATAACAAAAATATGGTAAATACTTTAATGGATTTAACAGAGTCAAACGATCCTGATTTCATGGATAGCACTGAGCCCTCAAGATCACCAGAGAAAATCCTGCCTGATTTAGATGATGATAACCACAATATTAGTGAATGTATTCCGCCTTCAAATTCTAGCAGTATCAGTTCAGTACCACGCACATTTACCAACGTGAAAAGTGCAAATAATGTTTCACCATACAAAGAGTTATGTAATAAAGTAATCGACTCTGAGTTTAGTGATAGCTGTCCCATTCCTGATTTAATATGTAATGAGAAACCATCTATATCACCATGCAGTGAACTATCAGAGAATGGAGATAATTCCACTGATCGTATATCAATTTCCCCTAAACCACAGAGACCCGTTGAAACTCCACATAATAAAGAAATTAATGTAAAGAAGACCACCTTGCCTGTAAAATCAAATAAAAACAATTCTGCACGATTGAACAACATTTTTGTTAAGAAGACCAAGAAAATACTTCAAATAAAGAATGCTAAAACTTTAGGCAGCATTGTGAAGAAGAATGAACCAGAGCCAATGCCATCAACATCAACCAGTAAATCACCAGAGAATTTCATTATGATGCATGACAGGAACGGACAAATGGAAACTACTACACTCCTAACTGTGTCAGTTGAGGAAATTAAAGAAAATGATGAAACTGATGATTTTAACACAGACATTGGGACACCTATGCAAATGGAACCAGGGCAACGAAATAGTCTAAATGACAGTAATGACATGAAAATAGTTGAAATTCAAGTGAAGGAAGAAGTGAATACAAGCAATGAAGGTGCCTTTTCTAATGATACACCTGCAGTTAAAACTAAGGACAACTTGCGACCAATCCATGTCATACCATACAGTAATATGTCAGCTGGAGATTTTGATGATGAGTCCAACCACAGAGAACTGCTGGATCTAGAAGCAGCCTCCAAGGGCAAACAGTTTGTCAGTATGATGAACGAGAACTACTTTGGCGAAAATCTGTATCCAGATTATTTCACAACGGACCGTGATGCTTTTGGTAATGAAAGGGAAATTACTCAGAAAGATGGAATGTACAACATTTGGGGTGAACCGTCACAGAAGGAAAATGAATTTGTATTACCAAATTTCATACAAGATACATACAAGATTACAGATAGTACAGGTATAGATTACTCTGCATTTTCTGGAAGAGAGGTACAGGGAGATAAAGAAGGCGATGGTTGTGAGAAGGACAGCAAGGCTGATGTACTAAGTGAAAGCAGGAGCGGGGGTGATACTCCATTGAATATTTGTGCAGATGAGCGTATGCCAGCACGGGGAGAGCTCAGTGGACAGGAAAGCAATGGCGATATGGAGTCGGCTTGGAGTGGGATATACACCGAGGTTACCGCGTCGGAGCCCTATGACCTCATCGCGAGGGAGAGCTGGGTCTCGGACGGCTCCGAAGTGGATCTTGCGGAGAAGATGGAAACGCTGGACGATGACGTGACACTGAAGAAGGTGCGCGGCGGGTCGGGCGCGGCGGCGGGCGGGCCGGGGGGCGCGGCGTCGCGCGTGTCGTACAGCCGCCTGCTCACCGCGCGGACCATCAAGCGCGAGCGGAGCGCCGCCCGCAACAGAGCCGCGTGTAATCTGATAACGGTCGATTCGAAGGCTTCGATAACGACCACGATACTTCAGTCATACGACATGGAGGACTCCAAGCCGAAGATCGAGGGTCTGATCAAGCAGGAAACGAAACGTAGAAGGAAGGACTTCGTCTGTTCGACCTGCAAAGTGGACCAGCTGACCGACGCCGCCTTCCACGCGCATCTCAAGATACATCCGCTGGAGTGCATGACCTGCGGGAAGTGCTTCTACAGGAGAGCCAATCTCGCTCTTCACATAAAGACGCATTTAGGAATTAAGAATTACAAATGTGACGTCTGCGAGAAGAGGTTCATAACGCGACAGAAGTTAACGGAACATCACAACATACACACGGGACGATCGCCGATCAAGTGCACCCACTGCGACGAGACCTTCAAGAGATACTCCAATATGTTGCAGCACAGAGACCGGCACCACCTCTCGAAGCGCGTGCGTGCGCGCGAGGTGTCGTGCGAGTGCGGGCTGGTGTTCGCGTCGCGCGCCCGCCTGCGCTGGCACCGCGAGACGCACGCCGCGCGCCCGCACGCCTGCGCGCTCTGCAGCGACAAGTTCGTGCACGCCGCCTCGCTCACCCGCCATCTGCGCCGCACGCACCGCCAGCCCGACCCGCACCTCGACGTGCCCTGCCCCGTCTGCAAGCAGCTGTACATCCGCACGAACCTGCGCGCGCATATGCAGACGCACACCGGCAAGCGGCCCTTCCCGTGCGTCATCTGCAACAAGTCGTTCACCACTAAGTGGAACCTGAAGCTGCACCGGTGGACCCACATGAACCGGTCCGCGAAACCCTTCAAGTGCCATCTGTGCAAGGGCGCGTTCATCCGGCAGTCGGAGTACGTGTCGCACATGAATGCGCACAAGTCGGTGCGGCCCTACACATGTAACTACTGCGGCTGCAAGTTCATCAGGAAGTACAACTGCCAGAGGCACGTCCGGGAGCACGAGACGGCCAAGAAGTTCGTCTGCAAGGTCCAGGAGTGCGGTAAGTCGTTCCATCGGAGCTACTATCTGTCCGAGCACATGAAGGTCCACAGCGGGGTCCGTCCGTTCGCTTGTAACATCTGCGGGAAGACATCGAGCAACAAGTCTAATCACAACAAGCACATAAAGATCCACCACGCGCGGGAGCCCGTGGCCACAGAGGCGTAG

Protein

MDQLIQCPVCTLYLHNGMSLESHLDTHPKDQVIKALCCLTSKGSGFGSRTSTPANSERSYRSRSRTPADDRWNGSQRSSEPDRYWRRPPSRTPKSTSITSLSRNETPEIRDSINFDTNSVPSGQHSLSYGLKSDKMQQFQSSQLSDFEQPFTVFQEPQEDREIKYSRSAEYTAMDNVNNVLTYNIPPIAAGLRFPPQNNLVSAGHKKAQDFVKILPKPNNILLKTNVGGIQYITSGVKPMHVMVPTTPTFVQKNIQNNMLISGNISNSSAHIDAKVVAPQLSGAQFNNMSTGAFTPSLSTVVTQNSQIIYREMVHNIDGKPFISSMPTMITTGPDAVTNVAQSSSMYQNLMVLDQFGSCMYTPPQQFVPKSCTTTVYTDTDTLIPNSQLCKNNLNDPKTLIIEVGPIIAPESVSSTSTSTSVVPSSGVSVKSDVTDTSDTINKLEYMSEASSSSKGLKILSNIKVEVPVQHNKNMVNTLMDLTESNDPDFMDSTEPSRSPEKILPDLDDDNHNISECIPPSNSSSISSVPRTFTNVKSANNVSPYKELCNKVIDSEFSDSCPIPDLICNEKPSISPCSELSENGDNSTDRISISPKPQRPVETPHNKEINVKKTTLPVKSNKNNSARLNNIFVKKTKKILQIKNAKTLGSIVKKNEPEPMPSTSTSKSPENFIMMHDRNGQMETTTLLTVSVEEIKENDETDDFNTDIGTPMQMEPGQRNSLNDSNDMKIVEIQVKEEVNTSNEGAFSNDTPAVKTKDNLRPIHVIPYSNMSAGDFDDESNHRELLDLEAASKGKQFVSMMNENYFGENLYPDYFTTDRDAFGNEREITQKDGMYNIWGEPSQKENEFVLPNFIQDTYKITDSTGIDYSAFSGREVQGDKEGDGCEKDSKADVLSESRSGGDTPLNICADERMPARGELSGQESNGDMESAWSGIYTEVTASEPYDLIARESWVSDGSEVDLAEKMETLDDDVTLKKVRGGSGAAAGGPGGAASRVSYSRLLTARTIKRERSAARNRAACNLITVDSKASITTTILQSYDMEDSKPKIEGLIKQETKRRRKDFVCSTCKVDQLTDAAFHAHLKIHPLECMTCGKCFYRRANLALHIKTHLGIKNYKCDVCEKRFITRQKLTEHHNIHTGRSPIKCTHCDETFKRYSNMLQHRDRHHLSKRVRAREVSCECGLVFASRARLRWHRETHAARPHACALCSDKFVHAASLTRHLRRTHRQPDPHLDVPCPVCKQLYIRTNLRAHMQTHTGKRPFPCVICNKSFTTKWNLKLHRWTHMNRSAKPFKCHLCKGAFIRQSEYVSHMNAHKSVRPYTCNYCGCKFIRKYNCQRHVREHETAKKFVCKVQECGKSFHRSYYLSEHMKVHSGVRPFACNICGKTSSNKSNHNKHIKIHHAREPVATEA

Uniprot

A0A2A4J5Y6 A0A0N1I7S3 A0A194Q2C6 A0A212F6U6 A0A2W1BL58 A0A2H1WSB2 + More
A0A0L7KND4

Pubmed

26354079 22118469 28756777 26227816

EMBL

NWSH01002790 PCG67527.1 KQ460542 KPJ14123.1 KQ459579 KPI99488.1 + More
AGBW02009968 OWR49462.1 KZ150071 PZC74027.1 ODYU01010626 SOQ55862.1 JTDY01008389 KOB64591.1

Proteomes

UP000218220 UP000053240 UP000053268 UP000007151 UP000037510

Pfam

PF00096 zf-C2H2

Interpro

IPR036236   Znf_C2H2_sf        + More
IPR013087   Znf_C2H2_type
IPR006642   Znf_Rad18_put

SUPFAM

SSF57667 SSF57667

ProteinModelPortal

A0A2A4J5Y6 A0A0N1I7S3 A0A194Q2C6 A0A212F6U6 A0A2W1BL58 A0A2H1WSB2 + More
A0A0L7KND4

PDB

5V3M E-value=5.47377e-44, Score=453

KEGG

101744027 no KO assigned | (RefSeq) zinc finger protein OZF-like

GO

GO:0003676 GO:0003677 GO:0006281 GO:0046872 GO:0006508 GO:0008013 GO:0007155 GO:0005515 GO:0016021 GO:0045211 GO:0048384

Length:

1409

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0024

Exp number, first 60 AAs:

0.00018

Total prob of N-in:

0.00013

outside

1 - 1409

Pi

205.332449

Theta

152.783749

Tajima's D

-1.686328

CLR

0.787861

CSRT

0.040297985100745

Interpretation

Possibly Positive selection

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics