SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO03229
Pre Gene Modal
BGIBMGA013588
Annotation
Uncharacterized_protein_OBRU01_14700_[Operophtera_brumata]
Location in the cell
Nuclear   Reliability : 4.155
 

Sequence

CDS
ATGGAAGATGAAGTTGAAGATGCTATCGAAAACCTTAAACAAACAGAATCCCAGAAGAGTGTAACCATCTCTAACGTGTATTCCCCCGACTTTAGCGACAGCAGCTCAGATAGAAACATTTCATCCGATAAAAACACATACGTAATAGCCATAGATGAGAGCGATGACAGTGAAATCTTCCCTCTACATGGAAACCAGAGTGTTATTGACCTTAAAGAAACACAAAAGACATCAAGTAGTAAAGAAATTTACAATCCATCTGATGGAGAATACAAATCAGTTTCAAAAAGCGTACAGAAATATGTTTTCGTAGCTCAAGAATCTTTTACACAAACTAGTAAGACTATCATGGAACTCGCCAAAGCTGATGCCAATGAAAATTATTCATGTGATAATCACGAAACGCAAACATCTTTAGTATCAATCACAGAAAACAAAACTGTAAAATATAAATTTGAAATTTCTAATTGCAAATCAAATTTGAATCGGTATTACAATGATGAAAAATATTCCCGTAATACAAGCAGTCCTTATACTAAGTTTATGCAAAATACTTTAGAAAATGTTTCATCTAAATTACCTGAATCAAATTATGTAAAGACAAATGAAAATCTCAGCAGCGGTTCGGATAAATATTTTGTTGATGACGAGACTGTGTCTAATGAAGAACGCTATGAAAACACAAGTAATTTTGAAGACAGTATAGGCACAGATCTAGACGAAGACTCTCTGATGGAACGCAAAAGACAAACATCAGACTGCAACAGCGGAAGTGACACCAGTGAAATACCGAAATCAGTGGAGAACGATATTGAAGAACTCTACACTAAACTAACAGAACATTTCGAACATAACACACATCCTGCCGAAAACAATGAAAGCAACGTAAAACAAACAGGACATTTAACGCCCTTGACGGAAGAATCGACGGTTCAGAAAGACAGTATTGCGAATTCAACATCTAATTATATAAATAGTACAAATGATGACAAAGACGTTCTATTTACTAACAATGCGGGTATCAAAGTTAAATTACTTCCAGAATGTGAATATAAGGAAGAATTCAAGCTACCACCGATAAAGAGAGATCATATGTACCTCAAAAAATTGTTTTTGTCTGATTACAGTTGTAATATAAATGTAACTACAGAAAATGATACTGCTAAAGAAGTTAGGGAATCACTGATTGATAGATGGGAGATCAGAAACAAAGACTTGGCGTCTGGCGAAGGTTGTGTTGATAACACTAGAAATGGTAAGGAACAAGCGGTAGATTGTTTGTGA
Protein
MEDEVEDAIENLKQTESQKSVTISNVYSPDFSDSSSDRNISSDKNTYVIAIDESDDSEIFPLHGNQSVIDLKETQKTSSSKEIYNPSDGEYKSVSKSVQKYVFVAQESFTQTSKTIMELAKADANENYSCDNHETQTSLVSITENKTVKYKFEISNCKSNLNRYYNDEKYSRNTSSPYTKFMQNTLENVSSKLPESNYVKTNENLSSGSDKYFVDDETVSNEERYENTSNFEDSIGTDLDEDSLMERKRQTSDCNSGSDTSEIPKSVENDIEELYTKLTEHFEHNTHPAENNESNVKQTGHLTPLTEESTVQKDSIANSTSNYINSTNDDKDVLFTNNAGIKVKLLPECEYKEEFKLPPIKRDHMYLKKLFLSDYSCNINVTTENDTAKEVRESLIDRWEIRNKDLASGEGCVDNTRNGKEQAVDCL

Summary

Pfam
PF12348   CLASP_N
Interpro
IPR016024   ARM-type_fold        + More
IPR011989   ARM-like       
IPR024395   CLASP_N_dom       
SUPFAM
SSF48371   SSF48371       
Gene 3D

Ontologies

GO

Topology

Length:
427
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00376
outside
1  -  427
 
 

Population Genetic Test Statistics

Pi
131.610245
Theta
140.708448
Tajima's D
0.128443
CLR
66.144348
CSRT
0.401729913504325
Interpretation
Uncertain
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