SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO03228  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA013587
Annotation
PREDICTED:_uncharacterized_protein_C4B3.18_[Amyelois_transitella]
Location in the cell
Cytoplasmic   Reliability : 1.317
 

Sequence

CDS
ATGGCAAGCGGCACTTGGGAGGAGTTCTTCGCGGCTCACCTACCTCCGCCTGACTTCGAAGACAACAGATCGCTATTGAAGGAGTTCTGCGAACGCCATGATCAATACGGCAACAGGATTGCTCTAGTGACCTCAGGTGGAACGACAGTGCCACTAGAGCACAATACGGTGCGTTTCGTGGATAACTTCAGCGCCGGCACACGAGGCTCTGCTTCTGCCGAGTATTTCTTGGAGCATGGCTACGCCGTGATCTTCATGCACCGGCAGAAGTCTTTGGAGCCTTTCACGAGGCACTTCAGCGGGCAGAAGTTGCTCGATATGCTGGATATTCAGGAGCGAGGACCCAATACGACAATAACCGTGAAGCCGGACAGCGTGGACGTTTTGGCTCCGATCCTGCTGCGGTACAAGGCGGCGCATTCGGCGGGAGCGATCCTGCATGTTTCGTTCACGACGGTGTCGGAGTACTTCTGGCTGTTGCGTGCCGCCTGCGAGTGCCTCACCAACCTCGGACCCCGGGCCGTGCTGTATCTAGCTGCGGCCGTGTCCGACTTCTATATCCCCAAGGATCGAGTTCCCACTCATAAGATGCAGTCGGCAAGTGGAGCCCCGGTGATCCAGCTCCAGCTGGTACCGAAGATGCTGGCGCCGCTCGTGAACCTCTGGGTTCCGGAGGCCTACGTGGTCTCCTTCAAGCTGGAGACGGATGAGAATCTCCTCGTGCCCAAGGCCAGAGCTGCCCTCGATAAATACAAACATAAGATGGTAGTGGCTAATTTACTTCAGACGCGTCATCATCGTGTGATACTCGTGACTCCGGACGAGACGCAGGAAATATTACTCACCCGGGAGGAGGTTCATGCGGGTGTGGACATCGAAGCATCAATAGTTCTGGAGCTGGTCCGTCTCCACGCGGAGCACCTGGCCCCCTGCGGCGCCCCCCCGGTGGCCCCCCACGGCTCGCTGGCCCCGCTGGCCCCCCACGCGCCGCCGACGCCGCGCACCCCGCGCTGA
Protein
MASGTWEEFFAAHLPPPDFEDNRSLLKEFCERHDQYGNRIALVTSGGTTVPLEHNTVRFVDNFSAGTRGSASAEYFLEHGYAVIFMHRQKSLEPFTRHFSGQKLLDMLDIQERGPNTTITVKPDSVDVLAPILLRYKAAHSAGAILHVSFTTVSEYFWLLRAACECLTNLGPRAVLYLAAAVSDFYIPKDRVPTHKMQSASGAPVIQLQLVPKMLAPLVNLWVPEAYVVSFKLETDENLLVPKARAALDKYKHKMVVANLLQTRHHRVILVTPDETQEILLTREEVHAGVDIEASIVLELVRLHAEHLAPCGAPPVAPHGSLAPLAPHAPPTPRTPR

Summary

EMBL
NHMN01024257    PZC87395.1    NWSH01001089    PCG72677.1    ODYU01011095    SOQ56618.1    + More
KQ459579    KPI99490.1    AGBW02010155    OWR49058.1    NHMN01024384    PZC87415.1    APGK01015784    APGK01030834    KB740787    KB739676    KB632375    ENN78934.1    ENN82167.1    ERL94015.1    CCAG010001307    KQ971382    EEZ97196.1    AJWK01016792    GEZM01095037    JAV55540.1    CM000364    EDX12371.1    CH954181    EDV48522.1    AF132150    AE014297    AAD34738.1    AAN13797.1    ALI30592.1    GBXI01009593    GBXI01000996    JAD04699.1    JAD13296.1    CH479179    EDW23839.1    CH964272    EDW84991.2    GAKP01018650    GAKP01018649    GAKP01018648    JAC40304.1    GDHF01029698    GDHF01017940    GDHF01016644    JAI22616.1    JAI34374.1    JAI35670.1    CH902617    EDV44368.2    CH933806    EDW14049.2    GFDF01010581    JAV03503.1    AAF55637.2    CM000160    EDW95990.2    OUUW01000013    SPP87667.1    DS231914    EDS25999.1    CM000070    EAL27317.2    CH916369    EDV93068.1    CP012526    ALC47677.1    CH480840    EDW49503.1    GFDL01014225    JAV20820.1    GAMC01004198    GAMC01004197    JAC02359.1    CH940650    EDW66598.2    JXUM01029909    JXUM01117035    KQ566045    KQ560867    KXJ70428.1    KXJ80563.1    GGFK01012192    MBW45513.1    GGFJ01007568    MBW56709.1    ADMH02002178    ETN58033.1    AXCM01000922    AAAB01008898    EAA09217.4    AXCN02001165    APCN01004968    CVRI01000066    CRL05853.1    JXJN01005088    PYGN01000453    PSN46107.1    KK852470    KDR23226.1    NEVH01020869    PNF20786.1    UFQS01001314    UFQT01001314    SSX10300.1    SSX29988.1    SSX10299.1    SSX29987.1    GGFM01005640    MBW26391.1    CH478210    EAT33550.1    ATLV01021176    KE525314    KFB46085.1    KQ460542    KPJ14126.1    GL446282    EFN88124.1    ADTU01024980    KQ434864    KZC09044.1    GL888223    EGI64463.1    QOIP01000003    RLU24438.1    GL436596    EFN71765.1    LBMM01003172    KMQ93858.1    KQ414613    KOC68950.1    GDKW01001642    JAI54953.1    ACPB03014379    GAHY01001349    JAA76161.1    KQ435824    KOX72192.1    GBBI01001462    JAC17250.1    KZ288269    PBC29927.1    GECL01000478    JAP05646.1    GBGD01002288    JAC86601.1    GL771866    EFZ09256.1    GEDC01002173    JAS35125.1    KQ761768    OAD57103.1    KQ981261    KYN44082.1    DS235241    EEB13816.1    GEFM01005763    JAP70033.1    NNAY01001413    OXU24058.1    GEGO01005302    JAR90102.1    KK107652    EZA48286.1    GEBQ01021686    GEBQ01006557    JAT18291.1    JAT33420.1    GEDV01003373    JAP85184.1   
Pfam
PF04127   DFP
Interpro
IPR035929   CoaB-like_sf        + More
IPR007085   DNA/pantothenate-metab_flavo_C       
SUPFAM
SSF102645   SSF102645       
Gene 3D
PDB
1P9O     E-value=7.11238e-63,     Score=609

Ontologies

Topology

Length:
337
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.26893
Exp number, first 60 AAs:
0.0006
Total prob of N-in:
0.00666
outside
1  -  337
 
 

Population Genetic Test Statistics

Pi
147.793103
Theta
141.117647
Tajima's D
0.154455
CLR
126.88865
CSRT
0.416679166041698
Interpretation
Uncertain
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