Gene

KWMTBOMO03226

Pre Gene Modal

BGIBMGA013586

Annotation

PREDICTED:_synaptic_vesicle_2-related_protein-like_[Bombyx_mori]

Location

Bomo_Chr6(+):2049569-2066824      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.97

CDS

ATGACCGTTGCTAAACATAACGAGGAGGAAACTATCGAAAGTGCCGTCGATAAAGCTGGTTTCGGTTTATACAGCATACTGTTAGTGATCTTGGTCGGCGTGTCGATTATATCGTTCGTATGCATCGGCTACAGCAGTACTATCCTGGTACCCACCAGCGCCTGCGAACTCCAGACCACCAGTAGCCAGCAAGGGATTCTAGCAGCTGGACCAGTTGTCGGTACCATAGTTGGCAGTTTAGTTTGGGGTTACCTAGCAGATACAAGAGGACGACGACTCATGCTGCTGGTATCATTGATGGGAAGCGCCATCATTAACATTGTGGCCAGCATATCTGTTAACTGGATTATGTTATTGATTTTGCAGTTCATTGCTGCTTTATTTGCGTCCGGTCTCTATTCGATGTCAATGTCGTTGTTGAGCGAGAGTGTCCCCATGGCGAAACGTAATTTGGTGATATTATTGGTGACCAGCATATTCTTGCTCTCACAAGGATTCATGGCGGCACTGGCCCTGCCAATAATTCCGTTGACTTTTTCATACTACATCTCTAGCTTGGACATCTATTGGAACTCTTGGAGGACCCTCGTGGTGGTCTACTCCATACCATGTATTTGTTCATTTATCTGCTTTTTATTCATGCAAGAGAGTCCTAAATTTGTCCACGCCATGGGAGATGAACAGAAGAGCTTAGAAATATTGAGGATAATTCATAAATATAATCATTTAGGTTCAAAAAAAGAGTTTCAGGTTTACCGAATAAAAAAGGCGGAGATGAACAAAAATGATACGCCGTCATCGTCAAAGGATCAAATAGTGCCGCTTTTTAGAGCGCCATTACTAAAGCCAACTATCATAATGACGTTATTGTACTTCTTTCAACAAGTTGGAGCGTTCATGGTGTGGCTTCCAACTATAGCCAACCAGTTCGTTCAAGTAACAGAAACAGGCGGGAACACAGATCTCACTCTTTGCGAAATCCTCAATAGTGAATTCGAAGTTTCAGTCAACCCTGACGTTGCTCCGTGCGCTCTCAACGAGACAGCACTGCTCATGGTTTTAGCCGTGGGTGCTTTACAGTGTGCATTCAATACAATTTTGAGTTTGATGGTAACTAAAATCGGAAGGCGCAATATTGTGATAGCCTTGGCGGGAATTTGTGGGCTGGCGGGGATTTTAGTGAACGTGGTACCAAATACCACGGGCAGCATTGTACTCTTCGGAATTTTCCTGATGGGGATAATCGTGATGGGTCTTTACACAGCTATCATCGTTGCGATTTTCCCTACACATTTACGGGCTATGGCCATCGCCTTACCACTGACTGCAAGCAGGATCACCACCTTCATCTCCATCCAGATCCTGAACTTGATGTTGGTGAACAACTGCGACGCTGGCTTCTATTTGTTTACATCAATATTTACATTATCGGCCGTTATAGCCGCCTTCCTACCAGACGATAGACGACTGCAGAAAGAAGTCAAAAATGAAACAGAAGCTAAGGCAGAAAATATAACTAAGTTGTAA

Protein

MTVAKHNEEETIESAVDKAGFGLYSILLVILVGVSIISFVCIGYSSTILVPTSACELQTTSSQQGILAAGPVVGTIVGSLVWGYLADTRGRRLMLLVSLMGSAIINIVASISVNWIMLLILQFIAALFASGLYSMSMSLLSESVPMAKRNLVILLVTSIFLLSQGFMAALALPIIPLTFSYYISSLDIYWNSWRTLVVVYSIPCICSFICFLFMQESPKFVHAMGDEQKSLEILRIIHKYNHLGSKKEFQVYRIKKAEMNKNDTPSSSKDQIVPLFRAPLLKPTIIMTLLYFFQQVGAFMVWLPTIANQFVQVTETGGNTDLTLCEILNSEFEVSVNPDVAPCALNETALLMVLAVGALQCAFNTILSLMVTKIGRRNIVIALAGICGLAGILVNVVPNTTGSIVLFGIFLMGIIVMGLYTAIIVAIFPTHLRAMAIALPLTASRITTFISIQILNLMLVNNCDAGFYLFTSIFTLSAVIAAFLPDDRRLQKEVKNETEAKAENITKL

Uniprot

A0A2A4JLT5   A0A2A4JMQ7   A0A2A4JLI7   A0A2H1WGI5   A0A0N1I9M8   A0A194Q3A9   + More
A0A212F5P7   A0A2H1V0R1   A0A2H1VUK7   A0A2W1BZI9   A0A2A4JT62   H9JVL3   A0A194Q1R5   H9JVR6   A0A0N1I9N3   A0A0N1IPG1   A0A2H1WI98   A0A194Q2D2   A0A2H1V250   A0A2W1BWW5   A0A2H1W7K7   A0A2A4JX40   A0A2A4JLN1   A0A212EZN8   A0A2A4JKW1   A0A2H1WYY1   A0A212FI93   A0A212EY43   A0A194PP30   A0A194QN61   A0A2W1BUU8   A0A194Q1T6   A0A194Q1T1   A0A2H1W801   A0A1Q3FLR3   A0A194PJI3   A0A212EQC0   H9JVM2   A0A182QCG3   A0A212EY03   A0A212EYD8   B0W415   A0A1Q3FNK2   A0A1B0CB10   A0A182NE16   U5ETH9   F5HLT0   A0A1L8EFY3   H9JVL1   A0A1L8EFQ6   A0A0N0PCN2   A0A1L8EFU2   A0A1I8P1U8   A0A1I8P1R5   Q17HA7   B0WQD3   A0A084W7Z4   D6WB98   A0A1J1HSM7   A0A1Q3FH96   A0A1B6I2U3   A0A1L8DUU9   A0A2H1X0I9   A0A1L8DEL2   A0A182GWL7   A0A182W1I9   A0A182MH17   A0A182H160   A0A2A4K5Q7   A0A067RD65   A0A2M4CS78   A0A182YGM4   A0A182N5S5   A0A1S4EXV1   Q17M95   A0A1Q3FM89   A0A0L7KD47   A0A212F5C2   A0A2M4CS45   B0WKE4   A0A2M4BKA1   T1PCW5   A0A1I8MVY3   A0A1L8DEG9   A0A1I8MVX6   A0A182GKA8   A0A182FPU8   A0A182P1Q5   A0A2M4BKB0   Q7QB66   A0A1S4G380   A0A2M4BKT9   A0A194Q1Q2   A0A182RYM7  

Pubmed

26354079    22118469    28756777    19121390    12364791    14747013    + More
17210077    17510324    24438588    18362917    19820115    26483478    24845553    25244985    26227816    25315136   

EMBL

NWSH01001089    PCG72678.1    PCG72680.1    PCG72679.1    ODYU01008516    SOQ52183.1    + More
KQ460542    KPJ14130.1    KQ459579    KPI99494.1    AGBW02010155    OWR49057.1    ODYU01000151    SOQ34435.1    ODYU01004537    SOQ44529.1    KZ149911    PZC78136.1    NWSH01000659    PCG74966.1    BABH01032453    KPI99491.1    BABH01032418    BABH01032419    BABH01032420    BABH01032421    BABH01032422    BABH01032423    KPJ14146.1    KPJ14127.1    SOQ52184.1    KPI99493.1    SOQ34432.1    PZC78135.1    ODYU01006861    SOQ49085.1    NWSH01000457    PCG76268.1    PCG72686.1    AGBW02011241    OWR46942.1    PCG72687.1    ODYU01012071    SOQ58176.1    AGBW02008417    OWR53448.1    AGBW02011638    OWR46364.1    KQ459603    KPI92885.1    KQ461194    KPJ06947.1    PZC78141.1    KPI99511.1    KPI99506.1    SOQ49086.1    GFDL01006485    JAV28560.1    KPI92884.1    AGBW02013272    OWR43679.1    BABH01032396    BABH01032397    BABH01032398    BABH01032399    AXCN02002212    AGBW02011653    OWR46341.1    AGBW02011531    OWR46513.1    DS231834    EDS32608.1    GFDL01005870    JAV29175.1    AJWK01004723    GANO01004365    JAB55506.1    AAAB01008952    EGK97241.1    GFDG01001245    JAV17554.1    BABH01032458    GFDG01001242    JAV17557.1    KPJ14131.1    GFDG01001241    JAV17558.1    CH477251    EAT46035.1    DS232039    EDS32804.1    ATLV01021326    KE525316    KFB46338.1    KQ971312    EEZ97917.1    CVRI01000020    CRK91005.1    GFDL01008118    JAV26927.1    GECU01026455    JAS81251.1    GFDF01003888    JAV10196.1    ODYU01012422    SOQ58716.1    GFDF01009181    JAV04903.1    JXUM01093536    KQ564063    KXJ72850.1    AXCM01000270    JXUM01102795    JXUM01102796    KQ564753    KXJ71786.1    NWSH01000098    PCG79585.1    KK852543    KDR21687.1    GGFL01003985    MBW68163.1    CH477207    EAT47854.1    GFDL01006432    JAV28613.1    JTDY01010086    KOB61253.1    AGBW02010212    OWR48924.1    GGFL01003986    MBW68164.1    DS231971    EDS29763.1    GGFJ01004344    MBW53485.1    KA646499    AFP61128.1    GFDF01009225    JAV04859.1    JXUM01069579    KQ562558    KXJ75630.1    GGFJ01004346    MBW53487.1    AAAB01008880    EAA08657.4    EGK97004.1    GGFJ01004430    MBW53571.1    KPI99507.1   

Proteomes

UP000218220    UP000053240    UP000053268    UP000007151    UP000005204    UP000075886    + More
UP000002320    UP000092461    UP000075884    UP000007062    UP000095300    UP000008820    UP000030765    UP000007266    UP000183832    UP000069940    UP000249989    UP000075920    UP000075883    UP000027135    UP000076408    UP000037510    UP000095301    UP000069272    UP000075885    UP000075900   

PRIDE

H9JVL3    H9JVR6    H9JVM2    H9JVL1   

Pfam

PF00083   Sugar_tr        + More
PF07690   MFS_1
PF12937   F-box-like

Interpro

IPR020846   MFS_dom        + More
IPR036259   MFS_trans_sf       
IPR005828   MFS_sugar_transport-like       
IPR011701   MFS       
IPR005829   Sugar_transporter_CS       
IPR032675   LRR_dom_sf       
IPR036047   F-box-like_dom_sf       
IPR001810   F-box_dom       

SUPFAM

SSF103473   SSF103473        + More
SSF81383   SSF81383       

Gene 3D

3.80.10.10    

CDD

cd06174  MFS

ProteinModelPortal

A0A2A4JLT5   A0A2A4JMQ7   A0A2A4JLI7   A0A2H1WGI5   A0A0N1I9M8   A0A194Q3A9   + More
A0A212F5P7   A0A2H1V0R1   A0A2H1VUK7   A0A2W1BZI9   A0A2A4JT62   H9JVL3   A0A194Q1R5   H9JVR6   A0A0N1I9N3   A0A0N1IPG1   A0A2H1WI98   A0A194Q2D2   A0A2H1V250   A0A2W1BWW5   A0A2H1W7K7   A0A2A4JX40   A0A2A4JLN1   A0A212EZN8   A0A2A4JKW1   A0A2H1WYY1   A0A212FI93   A0A212EY43   A0A194PP30   A0A194QN61   A0A2W1BUU8   A0A194Q1T6   A0A194Q1T1   A0A2H1W801   A0A1Q3FLR3   A0A194PJI3   A0A212EQC0   H9JVM2   A0A182QCG3   A0A212EY03   A0A212EYD8   B0W415   A0A1Q3FNK2   A0A1B0CB10   A0A182NE16   U5ETH9   F5HLT0   A0A1L8EFY3   H9JVL1   A0A1L8EFQ6   A0A0N0PCN2   A0A1L8EFU2   A0A1I8P1U8   A0A1I8P1R5   Q17HA7   B0WQD3   A0A084W7Z4   D6WB98   A0A1J1HSM7   A0A1Q3FH96   A0A1B6I2U3   A0A1L8DUU9   A0A2H1X0I9   A0A1L8DEL2   A0A182GWL7   A0A182W1I9   A0A182MH17   A0A182H160   A0A2A4K5Q7   A0A067RD65   A0A2M4CS78   A0A182YGM4   A0A182N5S5   A0A1S4EXV1   Q17M95   A0A1Q3FM89   A0A0L7KD47   A0A212F5C2   A0A2M4CS45   B0WKE4   A0A2M4BKA1   T1PCW5   A0A1I8MVY3   A0A1L8DEG9   A0A1I8MVX6   A0A182GKA8   A0A182FPU8   A0A182P1Q5   A0A2M4BKB0   Q7QB66   A0A1S4G380   A0A2M4BKT9   A0A194Q1Q2   A0A182RYM7  

KEGG

101744459    no KO assigned | (RefSeq) synaptic vesicle 2-related protein-like

GO

GO:0022857   GO:0016021   GO:0055085   GO:0005215   GO:0005488   GO:0008013   GO:0007155   GO:0005515   GO:0045211   GO:0006281   GO:0048384  

Length:

508

Number of predicted TMHs:

12

Exp number of AAs in TMHs:

262.57127

Exp number, first 60 AAs:

24.6515

Total prob of N-in:

0.99882

POSSIBLE N-term signal

sequence

inside

1  -  19

TMhelix

20  -  42

outside

43  -  63

TMhelix

64  -  86

inside

87  -  92

TMhelix

93  -  115

outside

116  -  118

TMhelix

119  -  141

inside

142  -  152

TMhelix

153  -  175

outside

176  -  194

TMhelix

195  -  214

inside

215  -  284

TMhelix

285  -  307

outside

308  -  348

TMhelix

349  -  371

inside

372  -  377

TMhelix

378  -  397

outside

398  -  406

TMhelix

407  -  429

inside

430  -  435

TMhelix

436  -  455

outside

456  -  464

TMhelix

465  -  484

inside

485  -  508

 

 

Pi

162.527728

Theta

161.159252

Tajima's D

0.021734

CLR

0.267045

CSRT

0.371181440927954

Interpretation

Uncertain