Gene

KWMTBOMO03224

Pre Gene Modal

BGIBMGA013585

Annotation

putative_SV2-like_protein_1?_partial_[Operophtera_brumata]

Location

Bomo_Chr6(+):2034939-2036058      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 2.692

CDS

ATGGAATTTTCATATCCCATTAATTTCCTAAACATCACATTCCGTTCCTGGCGTCTTTTGATCCTCGTCCTGGCAGTGCCATGTGCGATCACAGCTGGCCTGCTGCAGTTCTTCCACGAGAGCCCCAAGTTCCTGACCTCTCAGGGTCGATACGATGAAGCTCTGGTTGTGCTGAAGAAGATTTACGCCTGTAATACTGGAGATAGAGCCGAAAATTTTCCGGTCAAAAAACTCATTCCGGACAACGAGGACCAGACTGCCGAAGCCCAGGATTCGTTTCTCAAGTCCCTGTGGCATCAAACCGTGTCGCTGTTCAAGCCTCCATTGCTCAAGGATACGATGAGACTATTCTATTTGGTCATTATCATTTATATGACGTAA

Protein

MEFSYPINFLNITFRSWRLLILVLAVPCAITAGLLQFFHESPKFLTSQGRYDEALVVLKKIYACNTGDRAENFPVKKLIPDNEDQTAEAQDSFLKSLWHQTVSLFKPPLLKDTMRLFYLVIIIYMT

Uniprot

H9JVM2   A0A2A4JL38   A0A0L7L435   A0A0N1IG89   A0A194Q2D2   A0A212EY03   + More
A0A2H1WI98   A0A2H1W801   A0A0L7KRD9   A0A2H1V0R1   A0A2H1V6C3   A0A194Q800   A0A2W1BUU8   A0A2W1BGE8   A0A0L7KD47   A0A2H1VEB4   A0A0N1PIZ7   A0A0N1IPG1   A0A2W1BZI9   A0A2H1VUK7   A0A2H1V250   A0A194Q1R5   A0A194Q1T6   H9JVR7   A0A1J1HSM7   A0A2A4JT62   A0A212EQC0   A0A0N0PCK2   A0A212EY43   A0A2H1W7K7   A0A0N0PCN2   A0A2H1WJU4   A0A2A4IYX6   A0A2A4JLN1   A0A2A4JKW1   H9JVL3   A0A2W1BQE4   A0A194Q1Q2   A0A2A4JAH3   H9JVR5   A0A0L7LS59   A0A0N1I9N3   H9JV72   A0A194Q1T1   A0A0L7LHZ8   H9JVS5   H9JVR6   H9JVL1   A0A212FI93   A0A154NYA8   A0A0L7KVC0   A0A212EZN8   A0A2H1WU82   A0A2H1VZK7   T1GFD6   Q17HA7   A0A2A4JX40   A0A212F5C2   A0A0L7QLM7   E2ATB0   A0A170Y9B6   A0A2W1BVQ5   A0A310SDB3   A0A2A3EPR0   A0A194Q7W0   A0A195E6G9   A0A212EYD8   A0A2H1WYY1   S4Q006   A0A182GWL7   A0A195CY83   A0A195F2P9   A0A151XCA7   A0A2H1X0I9   A0A195B1S0   A0A158NLE1   E2BMY6   A0A2H1WYT6   B0WDR9   N6T4U4   E2BMY5   A0A1B6MD06   A0A2J7RAM5   A0A0A9XV82   V5GNJ1   Q178J2   A0A2A4J999   A0A2J7RAM3   F4WW57   R4WKX5   A0A1Q3FMH0   A0A084WQ83   A0A023EU38   A0A1B6DTT2   A0A1B6JMS4   A0A146KQ36   A0A0A9YRF3   A0A182VKS7   T1GER7   W5J8T8  

Pubmed

19121390    26227816    26354079    22118469    28756777    17510324    + More
20798317    23622113    26483478    21347285    23537049    25401762    21719571    23691247    24438588    24945155    26823975    20920257    23761445   

EMBL

BABH01032396    BABH01032397    BABH01032398    BABH01032399    NWSH01001089    PCG72681.1    + More
JTDY01003063    KOB70227.1    KQ460542    KPJ14129.1    KQ459579    KPI99493.1    AGBW02011653    OWR46341.1    ODYU01008516    SOQ52184.1    ODYU01006861    SOQ49086.1    JTDY01006887    KOB65616.1    ODYU01000151    SOQ34435.1    ODYU01000910    SOQ36383.1    KPI99535.1    KZ149911    PZC78141.1    KZ150202    PZC72277.1    JTDY01010086    KOB61253.1    ODYU01001846    SOQ38614.1    KPJ14149.1    KPJ14127.1    PZC78136.1    ODYU01004537    SOQ44529.1    SOQ34432.1    KPI99491.1    KPI99511.1    BABH01032426    BABH01032427    BABH01032428    BABH01032429    CVRI01000020    CRK91005.1    NWSH01000659    PCG74966.1    AGBW02013272    OWR43679.1    KPJ14144.1    AGBW02011638    OWR46364.1    SOQ49085.1    KPJ14131.1    ODYU01009141    SOQ53353.1    NWSH01005206    PCG64352.1    PCG72686.1    PCG72687.1    BABH01032453    KZ149979    PZC75844.1    KPI99507.1    NWSH01002380    PCG68430.1    BABH01032417    JTDY01000209    KOB78282.1    KPJ14146.1    BABH01037389    KPI99506.1    JTDY01001109    KOB74851.1    BABH01032451    BABH01032418    BABH01032419    BABH01032420    BABH01032421    BABH01032422    BABH01032423    BABH01032458    AGBW02008417    OWR53448.1    KQ434773    KZC04008.1    JTDY01005416    KOB67031.1    AGBW02011241    OWR46942.1    ODYU01011059    SOQ56557.1    ODYU01005122    SOQ45674.1    CAQQ02025659    CAQQ02025660    CAQQ02025661    CH477251    EAT46035.1    NWSH01000457    PCG76268.1    AGBW02010212    OWR48924.1    KQ414914    KOC59533.1    GL442545    EFN63355.1    GEMB01003525    JAR99692.1    PZC75843.1    KQ775195    OAD52273.1    KZ288197    PBC33718.1    KPI99495.1    KQ979568    KYN20768.1    AGBW02011531    OWR46513.1    ODYU01012071    SOQ58176.1    GAIX01000623    JAA91937.1    JXUM01093536    KQ564063    KXJ72850.1    KQ977115    KYN05613.1    KQ981864    KYN34369.1    KQ982314    KYQ58026.1    ODYU01012422    SOQ58716.1    KQ976662    KYM78421.1    ADTU01019324    GL449382    EFN82890.1    ODYU01012108    SOQ58229.1    DS231900    EDS44822.1    APGK01052662    KB741213    ENN72643.1    EFN82889.1    GEBQ01006218    JAT33759.1    NEVH01006567    PNF37880.1    GBHO01023261    GBHO01020300    GBHO01020298    GBHO01003596    JAG20343.1    JAG23304.1    JAG23306.1    JAG40008.1    GALX01002772    JAB65694.1    CH477362    EAT42650.1    PCG68429.1    PNF37878.1    GL888404    EGI61528.1    AK418278    BAN21490.1    GFDL01006323    JAV28722.1    ATLV01025286    KE525379    KFB52377.1    GAPW01000710    JAC12888.1    GEDC01008249    JAS29049.1    GECU01007523    JAT00184.1    GDHC01020470    JAP98158.1    GBHO01034941    GBHO01034937    GBHO01034935    GBHO01009383    JAG08663.1    JAG08667.1    JAG08669.1    JAG34221.1    CAQQ02083380    CAQQ02083381    ADMH02001852    ETN60872.1   

Proteomes

UP000005204    UP000218220    UP000037510    UP000053240    UP000053268    UP000007151    + More
UP000183832    UP000076502    UP000015102    UP000008820    UP000053825    UP000000311    UP000242457    UP000078492    UP000069940    UP000249989    UP000078542    UP000078541    UP000075809    UP000078540    UP000005205    UP000008237    UP000002320    UP000019118    UP000235965    UP000007755    UP000030765    UP000075903    UP000000673   

PRIDE

H9JVM2    H9JVR7    H9JVL3    H9JVR5    H9JV72    H9JVS5    + More
H9JVR6    H9JVL1   

Pfam

PF07690   MFS_1        + More
PF00083   Sugar_tr
PF12937   F-box-like

Interpro

IPR036259   MFS_trans_sf        + More
IPR011701   MFS       
IPR020846   MFS_dom       
IPR005828   MFS_sugar_transport-like       
IPR032675   LRR_dom_sf       
IPR036047   F-box-like_dom_sf       
IPR001810   F-box_dom       
IPR005829   Sugar_transporter_CS       

SUPFAM

SSF103473   SSF103473        + More
SSF81383   SSF81383       

Gene 3D

3.80.10.10    

CDD

cd06174  MFS

ProteinModelPortal

H9JVM2   A0A2A4JL38   A0A0L7L435   A0A0N1IG89   A0A194Q2D2   A0A212EY03   + More
A0A2H1WI98   A0A2H1W801   A0A0L7KRD9   A0A2H1V0R1   A0A2H1V6C3   A0A194Q800   A0A2W1BUU8   A0A2W1BGE8   A0A0L7KD47   A0A2H1VEB4   A0A0N1PIZ7   A0A0N1IPG1   A0A2W1BZI9   A0A2H1VUK7   A0A2H1V250   A0A194Q1R5   A0A194Q1T6   H9JVR7   A0A1J1HSM7   A0A2A4JT62   A0A212EQC0   A0A0N0PCK2   A0A212EY43   A0A2H1W7K7   A0A0N0PCN2   A0A2H1WJU4   A0A2A4IYX6   A0A2A4JLN1   A0A2A4JKW1   H9JVL3   A0A2W1BQE4   A0A194Q1Q2   A0A2A4JAH3   H9JVR5   A0A0L7LS59   A0A0N1I9N3   H9JV72   A0A194Q1T1   A0A0L7LHZ8   H9JVS5   H9JVR6   H9JVL1   A0A212FI93   A0A154NYA8   A0A0L7KVC0   A0A212EZN8   A0A2H1WU82   A0A2H1VZK7   T1GFD6   Q17HA7   A0A2A4JX40   A0A212F5C2   A0A0L7QLM7   E2ATB0   A0A170Y9B6   A0A2W1BVQ5   A0A310SDB3   A0A2A3EPR0   A0A194Q7W0   A0A195E6G9   A0A212EYD8   A0A2H1WYY1   S4Q006   A0A182GWL7   A0A195CY83   A0A195F2P9   A0A151XCA7   A0A2H1X0I9   A0A195B1S0   A0A158NLE1   E2BMY6   A0A2H1WYT6   B0WDR9   N6T4U4   E2BMY5   A0A1B6MD06   A0A2J7RAM5   A0A0A9XV82   V5GNJ1   Q178J2   A0A2A4J999   A0A2J7RAM3   F4WW57   R4WKX5   A0A1Q3FMH0   A0A084WQ83   A0A023EU38   A0A1B6DTT2   A0A1B6JMS4   A0A146KQ36   A0A0A9YRF3   A0A182VKS7   T1GER7   W5J8T8  

KEGG

101744605    no KO assigned | (RefSeq) synaptic vesicle glycoprotein 2B-like

GO

GO:0016021   GO:0055085   GO:0022857   GO:0005215   GO:0005488   GO:0008013   GO:0007155   GO:0005515   GO:0045211   GO:0006281   GO:0048384  

Length:

126

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

20.99016

Exp number, first 60 AAs:

20.5444

Total prob of N-in:

0.88256

POSSIBLE N-term signal

sequence

inside

1  -  18

TMhelix

19  -  38

outside

39  -  126

 

 

Pi

46.721276

Theta

123.01255

Tajima's D

-1.011814

CLR

0.680283

CSRT

0.137793110344483

Interpretation

Uncertain