Gene

KWMTBOMO03221

Annotation

PREDICTED:_synaptic_vesicle_glycoprotein_2C-like?_partial_[Bombyx_mori]

Location

Bomo_Chr6(-):1977464-1997173      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.865

CDS

ATGGGTGCGATTATCTTTAGACCGTGGCGTCTTCTAACCATCGTCTACGCTATTCCATTGCTCGTAGTGGCGGTCTGCATGACCTGGATGCAGGAGAGCCCCAAATTCCTAGTCACGAGAGGCAAACGCACCGAAGCTCTGGCTGTCCTCAGGAAAATATACTCCATTAACAGGGGAAAGCCTGAAAAAGAATATTGTGTCAAATCATTGAGTTGTCTATCAGAAACAGCCAGCGACGCCAGTGACACTGATGAGCTCAGAAATAATTCTATACTTTCGTTGCTTCGACCGCCGCATCTGAAATGGCTGCTTTTAACAGGATTCCTCATGTTTGGACTGTTCTCATTATTGAATGGTCTCTTTCTATTCGCACCGGACACGATCAATAGAATGCTGACTGGAACATCAGACGAAGTCGGAACCATATGTCTGTATATGAACAACGGTAACAATATAACGGCGATTACTGACGCGTGCGTGGATACGATCTCAAACAGCACCCTCCTAGTGATGGTGGTCACGACACTTGTGTACAGCGTCATTGTGATGGCGATAAGTGTCGCCCCACTGTCCAAGAAGACTCTGCTGGTCGCCGTATTCTTTGTGGTGGGCATCAGCTGTCTCGTTTCTGGCCTCAGCAAGAACAGAATGCTGGCCGGTGTTGCCATGTCGTCATTACAAATAACTGCTCTGGGTATCGGACCTTTGACTGCCTATGCGATACATCTGTTTCCAACGAGCTTAAGAGGAACTGCAGTAGGAGCCGTGATGATGTTTGGCAGGATCGGATCCGCGTTAGGCGCGAATGCAGCTGGATTCTTCCTATCGATAGCTTGTACCCTTACCTTCTATGGATTCTCGTTCATGCTGTTTTTGTGTGCTGCCCTCAGTTTGCTGCTGCCAAAAGACCGAAGTTGA

Protein

MGAIIFRPWRLLTIVYAIPLLVVAVCMTWMQESPKFLVTRGKRTEALAVLRKIYSINRGKPEKEYCVKSLSCLSETASDASDTDELRNNSILSLLRPPHLKWLLLTGFLMFGLFSLLNGLFLFAPDTINRMLTGTSDEVGTICLYMNNGNNITAITDACVDTISNSTLLVMVVTTLVYSVIVMAISVAPLSKKTLLVAVFFVVGISCLVSGLSKNRMLAGVAMSSLQITALGIGPLTAYAIHLFPTSLRGTAVGAVMMFGRIGSALGANAAGFFLSIACTLTFYGFSFMLFLCAALSLLLPKDRS

Uniprot

A0A2A4JM76   A0A2A4JMQ4   A0A2H1WNU1   A0A194Q1N6   A0A212EWS0   A0A0N1IHI8   + More
A0A2A4K5Q7   A0A2H1X0I9   A0A2W1BLZ7   A0A2H1WYT6   A0A212EYD8   A0A194QN61   A0A194PP30   A0A194QN48   A0A194PJI3   A0A212EZN8   D6WB98   A0A2H1W7K7   A0A2A4JKW1   A0A2A4JLN1   A0A2H1WJU4   A0A2H1WI98   A0A2W1BUU8   A0A1B6MNI5   H9JVR6   A0A0N1IG89   A0A194Q1T1   A0A2A4JL38   A0A194Q2D2   A0A182VKS7   A0A2W1BGE8   H9JVL1   A0A182INB7   N6T4U4   A0A2A4IYX6   Q6U1H2   A0A194Q1T6   A0A2H1V250   T1GJI8   A0A182WUC2   A0A182IB08   F5HLT0   A0A1B6BZJ7   B0WQD3   A0A182I9F6   B0XE98   A0A0L7L0V3   A0A1B0D3C4   A0A2H1WUV1   A0A2H1WGI5   A0A336LUV1   T1GJ80   A0A1B6KVL9   A0A2H1VUC9   A0A0M5J530   A0A2W1BVQ5   A0A212F5C2   A0A182IRQ8  

Pubmed

26354079    22118469    28756777    18362917    19820115    19121390    + More
23537049    15157223    12364791    14747013    17210077    26227816   

EMBL

NWSH01001089    PCG72684.1    PCG72682.1    ODYU01009931    SOQ54677.1    KQ459579    + More
KPI99492.1    AGBW02011907    OWR45939.1    KQ460542    KPJ14128.1    NWSH01000098    PCG79585.1    ODYU01012422    SOQ58716.1    KZ149975    PZC75948.1    ODYU01012108    SOQ58229.1    AGBW02011531    OWR46513.1    KQ461194    KPJ06947.1    KQ459603    KPI92885.1    KPJ06948.1    KPI92884.1    AGBW02011241    OWR46942.1    KQ971312    EEZ97917.1    ODYU01006861    SOQ49085.1    PCG72687.1    PCG72686.1    ODYU01009141    SOQ53353.1    ODYU01008516    SOQ52184.1    KZ149911    PZC78141.1    GEBQ01002460    JAT37517.1    BABH01032418    BABH01032419    BABH01032420    BABH01032421    BABH01032422    BABH01032423    KPJ14129.1    KPI99506.1    PCG72681.1    KPI99493.1    KZ150202    PZC72277.1    BABH01032458    APGK01052662    KB741213    ENN72643.1    NWSH01005206    PCG64352.1    AY380837    AAQ88394.1    KPI99511.1    ODYU01000151    SOQ34432.1    CAQQ02199956    APCN01006593    AAAB01008952    EGK97241.1    GEDC01030774    JAS06524.1    DS232039    EDS32804.1    APCN01000977    DS232813    EDS25872.1    JTDY01003749    KOB69050.1    AJVK01023425    ODYU01011202    SOQ56787.1    SOQ52183.1    UFQT01000141    SSX20771.1    CAQQ02394259    GEBQ01024546    JAT15431.1    ODYU01004504    SOQ44451.1    CP012526    ALC46844.1    KZ149979    PZC75843.1    AGBW02010212    OWR48924.1   

Proteomes

UP000218220    UP000053268    UP000007151    UP000053240    UP000007266    UP000005204    + More
UP000075903    UP000075880    UP000019118    UP000015102    UP000076407    UP000075840    UP000007062    UP000002320    UP000037510    UP000092462    UP000092553   

PRIDE

H9JVR6    H9JVL1   

Pfam

PF07690   MFS_1        + More
PF00083   Sugar_tr

Interpro

IPR020846   MFS_dom        + More
IPR036259   MFS_trans_sf       
IPR011701   MFS       
IPR005828   MFS_sugar_transport-like       
IPR005829   Sugar_transporter_CS       

SUPFAM

SSF103473   SSF103473       

CDD

cd06174  MFS

ProteinModelPortal

A0A2A4JM76   A0A2A4JMQ4   A0A2H1WNU1   A0A194Q1N6   A0A212EWS0   A0A0N1IHI8   + More
A0A2A4K5Q7   A0A2H1X0I9   A0A2W1BLZ7   A0A2H1WYT6   A0A212EYD8   A0A194QN61   A0A194PP30   A0A194QN48   A0A194PJI3   A0A212EZN8   D6WB98   A0A2H1W7K7   A0A2A4JKW1   A0A2A4JLN1   A0A2H1WJU4   A0A2H1WI98   A0A2W1BUU8   A0A1B6MNI5   H9JVR6   A0A0N1IG89   A0A194Q1T1   A0A2A4JL38   A0A194Q2D2   A0A182VKS7   A0A2W1BGE8   H9JVL1   A0A182INB7   N6T4U4   A0A2A4IYX6   Q6U1H2   A0A194Q1T6   A0A2H1V250   T1GJI8   A0A182WUC2   A0A182IB08   F5HLT0   A0A1B6BZJ7   B0WQD3   A0A182I9F6   B0XE98   A0A0L7L0V3   A0A1B0D3C4   A0A2H1WUV1   A0A2H1WGI5   A0A336LUV1   T1GJ80   A0A1B6KVL9   A0A2H1VUC9   A0A0M5J530   A0A2W1BVQ5   A0A212F5C2   A0A182IRQ8  

PDB

6N3I     E-value=0.0307352,     Score=86

KEGG

101737890    no KO assigned | (RefSeq) synaptic vesicle glycoprotein 2C-like

GO

GO:0055085   GO:0016021   GO:0022857   GO:0005215   GO:0005488   GO:0008013   GO:0007155   GO:0005515   GO:0045211   GO:0006281   GO:0048384  

Length:

305

Number of predicted TMHs:

7

Exp number of AAs in TMHs:

144.69738

Exp number, first 60 AAs:

20.96509

Total prob of N-in:

0.99768

POSSIBLE N-term signal

sequence

inside

1  -  11

TMhelix

12  -  31

outside

32  -  101

TMhelix

102  -  124

inside

125  -  167

TMhelix

168  -  190

outside

191  -  193

TMhelix

194  -  213

inside

214  -  219

TMhelix

220  -  242

outside

243  -  251

TMhelix

252  -  274

inside

275  -  280

TMhelix

281  -  300

outside

301  -  305

 

 

Pi

164.180059

Theta

143.124392

Tajima's D

0.490949

CLR

0.850404

CSRT

0.508974551272436

Interpretation

Uncertain