Gene

KWMTBOMO03220

Pre Gene Modal

BGIBMGA013629

Annotation

PREDICTED:_synaptic_vesicle_glycoprotein_2C-like_[Papilio_xuthus]

Location

Bomo_Chr6(-):1947731-1973703      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.973

CDS

ATGACAGCAAACGGGAAGATAGAGAAAGAGGGAGATAAGGAGAAGACTCGCATAGCGACGTTAGATGAAGCTATGATGGAAGCCGGGTTTGGTGTTTACAACATTCTGCATATGCTGATGAGTGGTGTCATTCTGATGGGCATGATCATGCAGAGCTTGGCCCTCGGGTACATCCTGCCGGTGGCCCAATGCGACCTCAAACTTACCTTACAACAGCGAGGATGGCTATCAGCTATTCCGTTCTTAGCAATAATATTAACATCATACTTCTGGGGCTGGCTGGCAGACACCCAGGGTCGGAGACCTGTGATGCTGTTCTCCATGATCATATCCGCGGTATTCTCGGTCTTTGCCAGCTTCTCACCTGAGATCATCTCATTTGCGATCTTGCAATTCCTATCTGCTGTGTTCATGTCCGGATCATCAGCAGTGGTTTACACGTATCTCGGCGAATTCAACAACCTGCGGCACAGGGACAAGATGGTGGCCTTCGGGTCTTCGTTCGTCGGTATCGGAACGGTTATATTACCATGTATATCATGGCTCATTCTACCTCTAGACTTCGCGTTTCCTATAGTCTACCTTGACATTCTTTATCGTCCATGGCGTCTACTGGTCGTAGCCTGCGCAGTGCCTTTCGTTATTGCATCAGTGCTATTGCTTTTCGCTCCGGAGAGTCCGAAGTTCTTGAACGCCAATGACCGGTACAGCGAGGCTCTGGATGTGGTGAAGACGATCTATTCGGGAAACAGAAAGATGTCTAAAGACGATTTTCCTATAAAATCCCTAGTAATGGACAGTCAGCTTTCCAAAGCTTGTAATAGTAAAGGAGCCGCTGCCGTCTGGTCTTCGATGAAGGATCAGACAGTACCTTTGTTCAAACGTCCCCTTCTGCCTTGGACCCTGCTGACTTGCTTTGTGCAATTCGGAATTTTCGCCACTACCAACGGTTTTTACGTATGGTTTCCCACGATACTAAACTCTCTCGCCAATCACGAAGGAGGTGAGACTGGGATCTGTGATGTCTTGGACGCAAGTAGGGAAACTGCAGCCAATGGAACTGATATAGCGTGCGACGATACAATGAACACTACGACTTTCGAGCTCTCGATCTATATAGGGCTCGTGTTCTGCTCCATGTACATCGTCGTAGGCTTCCTCGTGGACTTCATCGGGAAGAAGCCGATCCTCATCGCGCTTCTGAGCGCCACCGGACTTTGCGGGATCGGCGCCCACCTGGCCTCCAGCCAACATCTCGCGGTAGTTCTGTTCGCCATCTTTCAAATGTGCGGCGCTTGCATCGGCCTCATGAATGCGGTTGCCGTTGAATTGTTCCCCACGAAATTCAGAGCCATGGCGATTTGTCTTTCAATGATGATGGGAAGGGTCGGGTCGATGATTGGTTCCAACTTAATAGGGGTTTTCCTGGAGACGAATTGCGGAGCTGGCTTCTATCTTTTCGGGGGAATTCTTATCGTAAACGCCATATTCTGTTTCACACTACCCGGAAAAAAGACTTTGAAGAGGAAACAGACGGTTGAGCCGACACACAATGAAACCCACGAACCAGTATGA

Protein

MTANGKIEKEGDKEKTRIATLDEAMMEAGFGVYNILHMLMSGVILMGMIMQSLALGYILPVAQCDLKLTLQQRGWLSAIPFLAIILTSYFWGWLADTQGRRPVMLFSMIISAVFSVFASFSPEIISFAILQFLSAVFMSGSSAVVYTYLGEFNNLRHRDKMVAFGSSFVGIGTVILPCISWLILPLDFAFPIVYLDILYRPWRLLVVACAVPFVIASVLLLFAPESPKFLNANDRYSEALDVVKTIYSGNRKMSKDDFPIKSLVMDSQLSKACNSKGAAAVWSSMKDQTVPLFKRPLLPWTLLTCFVQFGIFATTNGFYVWFPTILNSLANHEGGETGICDVLDASRETAANGTDIACDDTMNTTTFELSIYIGLVFCSMYIVVGFLVDFIGKKPILIALLSATGLCGIGAHLASSQHLAVVLFAIFQMCGACIGLMNAVAVELFPTKFRAMAICLSMMMGRVGSMIGSNLIGVFLETNCGAGFYLFGGILIVNAIFCFTLPGKKTLKRKQTVEPTHNETHEPV

Uniprot

H9JVR6   A0A2A4JKW1   A0A2A4JLN1   A0A2H1W7K7   A0A194Q1R5   A0A2A4JX40   + More
A0A0N1IPG1   A0A212EZN8   A0A2H1WYY1   A0A0L7L135   A0A0L7KZW6   U5ETH9   A0A194PP30   A0A194PJI3   A0A194QN61   A0A1L8DEG9   A0A182YEX8   Q6U1H2   A0A1B0CB10   D6WB98   A0A2M4BKM4   W8AY09   A0A084WQ83   A0A2H1WYT6   A0A1Y9G9B8   A0A182R8G8   A0A182W337   A0A2A4K5Q7   A0A182NCP9   A0A182I9F6   A0A182H1P8   A0A2H1X0I9   A0A182P3F5   A0A182H9I5   A0A182INB7   A0A2M4BKA1   A0A2M4BKT9   A0A182TH39   A0A2M4BKB0   A0A182V7Y7   A0A023ETK8   Q7QEB5   A0A182KBN0   A0A182MDT7   A0A182N1C6   A0A182RL79   Q179Q0   A0A182WUB9   A0A1Y9HAI4   A0A182YJP5   A0A182XF22   A0A1B0GJR0   A0A336KU37   W5J8T8   A0A1I8PH06   A0A2M4BK86   A0A034VFR0   A0A182Q7L5   Q7QA97   A0A182HVJ0   A0A182P4D5   A0A023EUT1   A0A182TBQ9   A0A1Y9G865   A0A1Q3FQS3   A0A1Q3FLR3   D3TPI2   T1GER7   A0A212EYD8   A0A182K4E0   B0WEX7   A0A1A9YHE0   A0A182W4A7   W8C469   N6T4U4   A0A1Q3FNK2   A0A1L8EFQ6   A0A1L8EFU2   A0A034VLH4   A0A1L8EFY3   A0A1I8MZK1   A0A1I8MVX6   A0A1I8MVY3   T1PCW5   W8AWB7   A0A0A1X5Q6   A0A0A1WGJ9   W8BVQ3   A0A0K8U925   A0A0K8UH50   B0W415   T1P8E1   A0A0K8TVF7   A0A1A9UY17   A0A034W0A7   A0A0A1XE46   A0A1S4G380   Q16F34   A0A0L0BWY3  

Pubmed

19121390    26354079    22118469    26227816    25244985    15157223    + More
18362917    19820115    24495485    24438588    26483478    24945155    12364791    14747013    17210077    17510324    20920257    23761445    25348373    20353571    23537049    25315136    25830018    26108605   

EMBL

BABH01032418    BABH01032419    BABH01032420    BABH01032421    BABH01032422    BABH01032423    + More
NWSH01001089    PCG72687.1    PCG72686.1    ODYU01006861    SOQ49085.1    KQ459579    KPI99491.1    NWSH01000457    PCG76268.1    KQ460542    KPJ14127.1    AGBW02011241    OWR46942.1    ODYU01012071    SOQ58176.1    JTDY01003696    KOB69130.1    JTDY01003969    KOB68762.1    GANO01004365    JAB55506.1    KQ459603    KPI92885.1    KPI92884.1    KQ461194    KPJ06947.1    GFDF01009225    JAV04859.1    AY380837    AAQ88394.1    AJWK01004723    KQ971312    EEZ97917.1    GGFJ01004431    MBW53572.1    GAMC01012655    JAB93900.1    ATLV01025286    KE525379    KFB52377.1    ODYU01012108    SOQ58229.1    NWSH01000098    PCG79585.1    APCN01000977    JXUM01023187    KQ560654    KXJ81418.1    ODYU01012422    SOQ58716.1    JXUM01120885    KQ566440    KXJ70135.1    GGFJ01004344    MBW53485.1    GGFJ01004430    MBW53571.1    GGFJ01004346    MBW53487.1    GAPW01000918    JAC12680.1    AAAB01008847    EAA06847.4    AXCM01000113    AXCM01000114    CH477347    EAT42973.1    AXCN02001180    AJWK01022122    AJWK01022123    UFQS01000919    UFQT01000919    SSX07668.1    SSX28006.1    ADMH02001852    ETN60872.1    GGFJ01004345    MBW53486.1    GAKP01018554    JAC40398.1    AXCN02002664    AAAB01008898    EAA09107.5    APCN01005783    GAPW01000867    JAC12731.1    GFDL01005151    JAV29894.1    GFDL01006485    JAV28560.1    EZ423334    ADD19610.1    CAQQ02083380    CAQQ02083381    AGBW02011531    OWR46513.1    DS231912    EDS25835.1    GAMC01009766    JAB96789.1    APGK01052662    KB741213    ENN72643.1    GFDL01005870    JAV29175.1    GFDG01001242    JAV17557.1    GFDG01001241    JAV17558.1    GAKP01015980    JAC42972.1    GFDG01001245    JAV17554.1    KA646499    AFP61128.1    GAMC01013310    JAB93245.1    GBXI01008289    JAD06003.1    GBXI01016143    JAC98148.1    GAMC01013311    JAB93244.1    GDHF01029221    JAI23093.1    GDHF01026325    JAI25989.1    DS231834    EDS32608.1    KA644899    AFP59528.1    GDHF01034056    GDHF01028880    GDHF01023028    GDHF01020845    GDHF01015160    JAI18258.1    JAI23434.1    JAI29286.1    JAI31469.1    JAI37154.1    GAKP01010823    JAC48129.1    GBXI01004603    JAD09689.1    CH478516    EAT32850.1    JRES01001303    KNC23749.1   

Proteomes

UP000005204    UP000218220    UP000053268    UP000053240    UP000007151    UP000037510    + More
UP000076408    UP000092461    UP000007266    UP000030765    UP000069272    UP000075900    UP000075920    UP000075884    UP000075840    UP000069940    UP000249989    UP000075885    UP000075880    UP000075902    UP000075903    UP000007062    UP000075881    UP000075883    UP000008820    UP000076407    UP000075886    UP000000673    UP000095300    UP000075901    UP000015102    UP000002320    UP000092443    UP000019118    UP000095301    UP000078200    UP000037069   

PRIDE

H9JVR6   

Pfam

PF07690   MFS_1        + More
PF00083   Sugar_tr

Interpro

IPR011701   MFS        + More
IPR036259   MFS_trans_sf       
IPR020846   MFS_dom       
IPR005828   MFS_sugar_transport-like       
IPR005829   Sugar_transporter_CS       

SUPFAM

SSF103473   SSF103473       

CDD

cd06174  MFS

ProteinModelPortal

H9JVR6   A0A2A4JKW1   A0A2A4JLN1   A0A2H1W7K7   A0A194Q1R5   A0A2A4JX40   + More
A0A0N1IPG1   A0A212EZN8   A0A2H1WYY1   A0A0L7L135   A0A0L7KZW6   U5ETH9   A0A194PP30   A0A194PJI3   A0A194QN61   A0A1L8DEG9   A0A182YEX8   Q6U1H2   A0A1B0CB10   D6WB98   A0A2M4BKM4   W8AY09   A0A084WQ83   A0A2H1WYT6   A0A1Y9G9B8   A0A182R8G8   A0A182W337   A0A2A4K5Q7   A0A182NCP9   A0A182I9F6   A0A182H1P8   A0A2H1X0I9   A0A182P3F5   A0A182H9I5   A0A182INB7   A0A2M4BKA1   A0A2M4BKT9   A0A182TH39   A0A2M4BKB0   A0A182V7Y7   A0A023ETK8   Q7QEB5   A0A182KBN0   A0A182MDT7   A0A182N1C6   A0A182RL79   Q179Q0   A0A182WUB9   A0A1Y9HAI4   A0A182YJP5   A0A182XF22   A0A1B0GJR0   A0A336KU37   W5J8T8   A0A1I8PH06   A0A2M4BK86   A0A034VFR0   A0A182Q7L5   Q7QA97   A0A182HVJ0   A0A182P4D5   A0A023EUT1   A0A182TBQ9   A0A1Y9G865   A0A1Q3FQS3   A0A1Q3FLR3   D3TPI2   T1GER7   A0A212EYD8   A0A182K4E0   B0WEX7   A0A1A9YHE0   A0A182W4A7   W8C469   N6T4U4   A0A1Q3FNK2   A0A1L8EFQ6   A0A1L8EFU2   A0A034VLH4   A0A1L8EFY3   A0A1I8MZK1   A0A1I8MVX6   A0A1I8MVY3   T1PCW5   W8AWB7   A0A0A1X5Q6   A0A0A1WGJ9   W8BVQ3   A0A0K8U925   A0A0K8UH50   B0W415   T1P8E1   A0A0K8TVF7   A0A1A9UY17   A0A034W0A7   A0A0A1XE46   A0A1S4G380   Q16F34   A0A0L0BWY3  

PDB

4LDS     E-value=0.000150984,     Score=108

KEGG

101739498    no KO assigned | (RefSeq) synaptic vesicle glycoprotein 2A-like

GO

GO:0016021   GO:0055085   GO:0022857   GO:0005215   GO:0050662   GO:0005488   GO:0008013   GO:0007155   GO:0005515   GO:0045211   GO:0006281   GO:0048384  

Length:

524

Number of predicted TMHs:

12

Exp number of AAs in TMHs:

262.60908

Exp number, first 60 AAs:

22.59132

Total prob of N-in:

0.98923

POSSIBLE N-term signal

sequence

inside

1  -  35

TMhelix

36  -  58

outside

59  -  72

TMhelix

73  -  95

inside

96  -  101

TMhelix

102  -  124

outside

125  -  127

TMhelix

128  -  150

inside

151  -  161

TMhelix

162  -  184

outside

185  -  203

TMhelix

204  -  223

inside

224  -  299

TMhelix

300  -  322

outside

323  -  368

TMhelix

369  -  391

inside

392  -  395

TMhelix

396  -  415

outside

416  -  419

TMhelix

420  -  442

inside

443  -  453

TMhelix

454  -  476

outside

477  -  480

TMhelix

481  -  503

inside

504  -  524

 

 

Pi

284.288774

Theta

173.828025

Tajima's D

2.209723

CLR

0.650964

CSRT

0.910454477276136

Interpretation

Uncertain