Gene

KWMTBOMO03218  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA013631

Annotation

PREDICTED:_UDP-galactose_4-epimerase_isoform_X1_[Bombyx_mori]

Location

Bomo_Chr6(-):1909283-1924633      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.847

CDS

ATGTCTGATACAACCGGTGATAATTTAAAACCACGAGTTTTAATACTAGGAGGATGCGGCTTCATCGGGCGGAACTTGGTAGATTACTTGATAAGGAACGATCTGGTTAGCGGGCTTCGTGTTGTGGACAAGACCCCGCCTCAACTGGCTTTCCTGAACCCTACACATTCTAAAACATTTGAGGACCCCCGCGTTGAATACAAAAGCGCAAATCTAATTAATCAGACTTCTTGCGCATCAGCGTTAGATCCAGGAGACGACGCGCCATGGGGGCTGGTAGTGAATTGTGCGAGCGAAACTCGCGGAGGTCAGACCGAGGCGGTTTATGCGGAAGGAATCGTCACCCTCAGCCTGAACGTGGCCAAGCACTGCGCCAGGATGAAGGTACCAAGACTGGTAGAGATCTCAAGTGGACAGATGTGCAGCAATGATAAGCCCCAAAAGGAAGATTGCTCAATTGACCCTTGGACGATCGAAGGTCGGATGAAGAGCAAAGTGGAACAAGAGCTGAAAAACATGGAGGACCTGAACTACACCATCATAAGGCCCGCTATTGTGTACGGAATCGGAGACAGAAGAAGTTTGACACCCCGTCTCCTCTACGGTGGAATTTACAAGCATTTAGGCGAAACAATGAAACTCCTTTGGACTGGCGATCTGAAAATGAACACGGTACATGTCCGCGACGTCTGTCGTGCCATCTGGACTCTCGGGACCAGTCCTCAGGCCAACAAGCAGATCTATAACTTGGTTGACGAAGGGAACAGCACTCAGGGTACATTGGCCGAGCTCGTCTCTGATATATTCAAAATCAATCATGATTACTATGGAACCGCTATTTCTACTTTGGCTAAGAACGACATAGCGTCTGTGGCGGAGGAAGCCAACGACAAGCACCTGACCGCGTGGGCGGACATCTGCCGCAAGTACTCCCTCCAGCACACGCCGCTCGAGCCCAGCGCCGGCGTGGAGCTGCTCCTCAACAAGCAGCTCTGTCTCGACGGGACCAAGCTGCGCGCGCTGATGCAACTGGACGTGCCCAAACCTACCGCCGAACTGTTCAGAGAGGTTTTAGAAGACTATGCTTCGATGCAACTCTTCCCCAAGGAACTTTTACTATGA

Protein

MSDTTGDNLKPRVLILGGCGFIGRNLVDYLIRNDLVSGLRVVDKTPPQLAFLNPTHSKTFEDPRVEYKSANLINQTSCASALDPGDDAPWGLVVNCASETRGGQTEAVYAEGIVTLSLNVAKHCARMKVPRLVEISSGQMCSNDKPQKEDCSIDPWTIEGRMKSKVEQELKNMEDLNYTIIRPAIVYGIGDRRSLTPRLLYGGIYKHLGETMKLLWTGDLKMNTVHVRDVCRAIWTLGTSPQANKQIYNLVDEGNSTQGTLAELVSDIFKINHDYYGTAISTLAKNDIASVAEEANDKHLTAWADICRKYSLQHTPLEPSAGVELLLNKQLCLDGTKLRALMQLDVPKPTAELFREVLEDYASMQLFPKELLL

Similarity

Belongs to the 3-beta-HSD family.

Uniprot

H9JVR8   Q2F5U7   A0A212EQB7   A0A194Q1S1   A0A2H1W3G6   A0A2A4J1B7   + More
E0VD37   A0A0L7L0C4   K7J2J2   A0A0N0PCX3   A0A2J7RRT9   A0A067RJ95   A0A2A3ED06   A0A232FFA2   A0A088ANF9   A0A154PAW1   A0A0L7RH04   F4WZW9   E2ACB9   A0A026X1D3   A0A0M8ZND2   A0A195DXJ8   A0A151XAF6   A0A0J7KDQ3   D6WAY2   E2BAR9   A0A195B727   A0A151ICG4   A0A3L8DRP1   A0A1S4FQC6   A0A087TEH3   A0A1A9ZSV9   A0A1A9VDP6   Q16SV9   A0A1A9Y0I8   A0A0V0GBH3   A0A1B6DYC1   A0A1Q3F9G2   V5GVS9   A0A1Y1MDH2   E9ILA8   B0X5C7   A0A034WSA4   A0A1A9W5Q6   W8CAV4   A0A023F1S8   A0A0A1X5U0   A0A1B6M4V8   A0A0C9QMM5   B3M318   A0A0L0BR88   A0A0K8VDX5   A0A182UAF5   A0A1I8NEJ7   A0A2M4BQW7   A0A1W7R8D1   A0A182ID31   Q7PQ88   A0A1L8EC87   A0A182L6W3   B4HG09   A0A182X8U9   A0A0K8RDN9   A0A2M4BQW2   B4QSD3   B3P8B8   Q9VCF8   A0A131XY58   A0A1I8Q2J4   L7M5Y5   A0A182V4I3   B4K739   B4PL49   A0A224YIV9   A0A182F9K5   A0A182N4Q2   A0A1W4UJT4   A0A195FF94   B7P565   A0A131YMG1   W5JG14   A0A3B0JKL6   A0A182QJ94   A0A2M4AN79   A0A182JPD5   Q298M8   B4G4C2   A0A0M5J0K5   A0A084VEN8   B4M0C6   A0A2P8XZ44   A0A131XJC8   A0A182VY51   A0A182PRH4   A0A293N0S7   A0A1E1XVL9   A0A182SE42   A0A182XWQ8   A0A182IRA6  

Pubmed

19121390    22118469    26354079    20566863    26227816    20075255    + More
24845553    28648823    21719571    20798317    24508170    18362917    19820115    30249741    17510324    28004739    21282665    25348373    24495485    25474469    25830018    17994087    26108605    25315136    12364791    14747013    17210077    20966253    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    25576852    17550304    28797301    26830274    20920257    23761445    15632085    24438588    29403074    28049606    29209593    25244985   

EMBL

BABH01032430    BABH01032431    BABH01032432    BABH01032433    DQ311326    ABD36270.1    + More
AGBW02013272    OWR43678.1    KQ459579    KPI99496.1    ODYU01006064    SOQ47588.1    NWSH01004378    PCG65173.1    DS235070    EEB11293.1    JTDY01003969    KOB68761.1    KQ460542    KPJ14132.1    NEVH01000598    PNF43558.1    KK852651    KDR19426.1    KZ288292    PBC29172.1    NNAY01000289    OXU29446.1    KQ434864    KZC08992.1    KQ414596    KOC69976.1    GL888480    EGI60259.1    GL438491    EFN68909.1    KK107063    EZA61184.1    KQ436008    KOX67607.1    KQ980107    KYN17625.1    KQ982339    KYQ57344.1    LBMM01009014    KMQ88462.1    KQ971312    EEZ97930.1    GL446831    EFN87204.1    KQ976574    KYM80301.1    KQ978053    KYM97777.1    QOIP01000005    RLU22843.1    KK114856    KFM63512.1    CH477664    EAT37560.1    GECL01000896    JAP05228.1    GEDC01006637    JAS30661.1    GFDL01010845    JAV24200.1    GALX01004118    JAB64348.1    GEZM01034203    JAV83869.1    GL764074    EFZ18609.1    DS232374    EDS40812.1    GAKP01001882    JAC57070.1    GAMC01001014    JAC05542.1    GBBI01003245    JAC15467.1    GBXI01008056    JAD06236.1    GEBQ01009018    JAT30959.1    GBYB01004759    JAG74526.1    CH902617    EDV42418.1    JRES01001482    KNC22531.1    GDHF01015231    JAI37083.1    GGFJ01006335    MBW55476.1    GEHC01000241    JAV47404.1    APCN01004984    AAAB01008898    EAA09169.4    GFDG01002448    JAV16351.1    CH480815    EDW43402.1    GADI01004627    JAA69181.1    GGFJ01006336    MBW55477.1    CM000364    EDX14132.1    CH954182    EDV53942.1    AE014297    BT004487    AAF56208.1    AAO42651.1    GEFM01004746    JAP71050.1    GACK01005564    JAA59470.1    CH933806    EDW16352.1    CM000160    EDW99034.1    GFPF01006430    MAA17576.1    KQ981625    KYN39058.1    ABJB010093497    ABJB010151749    ABJB010383793    ABJB010478031    ABJB010901382    DS639501    EEC01737.1    GEDV01008927    JAP79630.1    ADMH02001608    ETN61820.1    OUUW01000007    SPP82765.1    AXCN02001188    GGFK01008913    MBW42234.1    CM000070    EAL27927.1    CH479179    EDW24470.1    CP012526    ALC47894.1    ATLV01012285    KE524778    KFB36432.1    CH940650    EDW67288.1    PYGN01001136    PSN37282.1    GEFH01002129    JAP66452.1    GFWV01021053    MAA45781.1    GFAA01000248    JAU03187.1   

Proteomes

UP000005204    UP000007151    UP000053268    UP000218220    UP000009046    UP000037510    + More
UP000002358    UP000053240    UP000235965    UP000027135    UP000242457    UP000215335    UP000005203    UP000076502    UP000053825    UP000007755    UP000000311    UP000053097    UP000053105    UP000078492    UP000075809    UP000036403    UP000007266    UP000008237    UP000078540    UP000078542    UP000279307    UP000054359    UP000092445    UP000078200    UP000008820    UP000092443    UP000002320    UP000091820    UP000007801    UP000037069    UP000075902    UP000095301    UP000075840    UP000007062    UP000075882    UP000001292    UP000076407    UP000000304    UP000008711    UP000000803    UP000095300    UP000075903    UP000009192    UP000002282    UP000069272    UP000075884    UP000192221    UP000078541    UP000001555    UP000000673    UP000268350    UP000075886    UP000075881    UP000001819    UP000008744    UP000092553    UP000030765    UP000008792    UP000245037    UP000075920    UP000075885    UP000075901    UP000076408    UP000075880   

PRIDE

H9JVR8    Q2F5U7    Q9VCF8   

Pfam

PF01370   Epimerase        + More
PF01073   3Beta_HSD

Interpro

IPR001509   Epimerase_deHydtase        + More
IPR036291   NAD(P)-bd_dom_sf       
IPR002225   3Beta_OHSteriod_DH/Estase       

SUPFAM

SSF51735   SSF51735       

ProteinModelPortal

H9JVR8   Q2F5U7   A0A212EQB7   A0A194Q1S1   A0A2H1W3G6   A0A2A4J1B7   + More
E0VD37   A0A0L7L0C4   K7J2J2   A0A0N0PCX3   A0A2J7RRT9   A0A067RJ95   A0A2A3ED06   A0A232FFA2   A0A088ANF9   A0A154PAW1   A0A0L7RH04   F4WZW9   E2ACB9   A0A026X1D3   A0A0M8ZND2   A0A195DXJ8   A0A151XAF6   A0A0J7KDQ3   D6WAY2   E2BAR9   A0A195B727   A0A151ICG4   A0A3L8DRP1   A0A1S4FQC6   A0A087TEH3   A0A1A9ZSV9   A0A1A9VDP6   Q16SV9   A0A1A9Y0I8   A0A0V0GBH3   A0A1B6DYC1   A0A1Q3F9G2   V5GVS9   A0A1Y1MDH2   E9ILA8   B0X5C7   A0A034WSA4   A0A1A9W5Q6   W8CAV4   A0A023F1S8   A0A0A1X5U0   A0A1B6M4V8   A0A0C9QMM5   B3M318   A0A0L0BR88   A0A0K8VDX5   A0A182UAF5   A0A1I8NEJ7   A0A2M4BQW7   A0A1W7R8D1   A0A182ID31   Q7PQ88   A0A1L8EC87   A0A182L6W3   B4HG09   A0A182X8U9   A0A0K8RDN9   A0A2M4BQW2   B4QSD3   B3P8B8   Q9VCF8   A0A131XY58   A0A1I8Q2J4   L7M5Y5   A0A182V4I3   B4K739   B4PL49   A0A224YIV9   A0A182F9K5   A0A182N4Q2   A0A1W4UJT4   A0A195FF94   B7P565   A0A131YMG1   W5JG14   A0A3B0JKL6   A0A182QJ94   A0A2M4AN79   A0A182JPD5   Q298M8   B4G4C2   A0A0M5J0K5   A0A084VEN8   B4M0C6   A0A2P8XZ44   A0A131XJC8   A0A182VY51   A0A182PRH4   A0A293N0S7   A0A1E1XVL9   A0A182SE42   A0A182XWQ8   A0A182IRA6  

KEGG

692916    no KO assigned | (RefSeq) UDP-galactose 4-epimerase

GO

GO:0003824   GO:0050662   GO:0003854   GO:0006694   GO:0016740   GO:0003978   GO:0005488   GO:0008013   GO:0007155   GO:0005515   GO:0016021   GO:0045211   GO:0006281   GO:0048384  

Length:

373

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

1.75811

Exp number, first 60 AAs:

1.75644

Total prob of N-in:

0.10838

outside

1  -  373

 

 

Pi

185.486245

Theta

180.135553

Tajima's D

0.138425

CLR

22.556839

CSRT

0.410429478526074

Interpretation

Uncertain