Gene

KWMTBOMO03214

Pre Gene Modal

BGIBMGA013636

Annotation

hypothetical_protein_KGM_01964_[Danaus_plexippus]

Location

Bomo_Chr6(-):1826392-1833063      View in EpiBrowser

Full name

Zinc finger protein       + More
Zinc finger protein Xfin      

Alternative Name

Xenopus fingers protein

Transcription factor

zf-C2H2

Location in the cell

Nuclear   Reliability : 3.124

CDS

ATGGCTTCACAATCTAACACTGCAGGACCGAAGCCGAGCCAAATGTTCCACATCCCGAAGGCCACTACTATAGATAAAATTGGCGGGATCCACTGTCACATATGTAAATTAACTTTCGGTAAAAAAAAAGAATATGACGAACATTACGTGGGGCACAATACAGGAGAGAAAGAAACAGTTTATACTTGTGTCATATGCCATAAGCAGATAGCTGGCTACCGGAGTTTCCAGGGGCATTGTTACCTCAAACATGTTGTCAAAGACAGATTTACATGCAATGACTGCTATAGAATGTATTCAAAACAAAGCTTGTTGCTGAAACATATTGCATCTATGCATACATTCATATGCAAAATATGTAAGCAAAGTTTCACCTCAAAAAACGAACTTCTCATTCACAATATCATCCACAAATCTGAGAAAAACAAAGCACCTTTTCCATGCATGACATGTGGCAAGTATATAGATACAGCAGATATGTGTGAATTGCATATCGATGAGGCCAGTTCGTTTACATTTCCGTGTCCAGTGTGCGAAGAATCATTTCCGAATCGACCGGAGATCCTGAAACATTTAACCAAGCATTTTGATGATGAAATAGAAATCAATACTGATACGAAAGTGTTGATTGAAGATTGCTCCGTAAACATGGTCGGTGTATACTGCTGCTTCTGTGAGGAAACTTTTAACAATCGCATCGAATATGATTTGCATTACGAGACTGAGCATAGCGACAAGGAACTTGTTTACACATGTACAATATGCAAGAAGCAATATAATAAATATGCATTGTTTGGCAATCACTGTCATTTCCATATTTCCAAGAACAGATTCGAGTGTTCGGAGTGTGGCAAGCTGTTCCCGCGGCTGTCGCTGCTGGTGCTGCACCGCGCGGCGCACGGGCCCGGCCACGACCCCGAGCGGCCCTTCCCCTGCTCGCACTGCGACTGCACCTTCTCCACGCTGCAGCGCCTCACCGAGCACCACCGCCGCGAGCACCCGCACCGAGACATCCGCTGCCACAGACCAGGCTGCGACCTCACATTCGAATCGTTCAAAGATCTGATCCTCCACTACCCGAGTCACAGCGACGAATATTGCTGTCGTCAGTGCGGTCTTCAGTTCAGCACCCTCTCCTCCTGCGAGAAGCATCTAAACGTTCACGCCATCAAGCATTACTCCTGCCCTGTCTGTAACCAAAGATACCAGCACAAGTACCAACTTATCAAGCACATACCTCAACACTTTGAAACTGTCTTCCATGTTTGCACAACATGCGGGAAGTCTTACAACGCTAAATCGAGGCTCATACAGCACGCGAAAACTCATACGTTAAGGCAGTTCAAATGCACTTATTGCAGAAAAGCATTCCTCAAAGATTATGATCTACAGCAACACGTGAATATTCATATTGGTTTACTTCCCTACAAGTGTTCGTTATGCCCCAAAGCATTCGCTAGTTATTCGAATCACTACAAACACATGCTTCGCGTGCACAATGTCCAACCAAAATCTAAATCGAATCTACAAAAAAATATCAAAGATCCATCCAAGAAAGAATGCCATGACAAAGATACGAATGAAGAAAAACAATCTGTAGTTGATCAAAAGCCGTTAGAGCAAACCATAATGGATACGGATGATAGTACAGTAGAGAGTATTGATCCCATCGCTCTTGAGAAGGAATTGCAGATGTTCAATGAGACCAACAACGGGGACACTGTTGATGGACCCCAACTTGCCGACATCCAGCCCGACAATAGTGCTGTAGCTGTCTTTGATTTCCAATCAAACAATTCAACATTCCAAACGTCCATGGTCCCTCCGGAGTATGGCCCCGACTTTGTGAACAAGGCCATCGAGAGCTCAGCGTTCAGCGGTGACTACATAGACCTGGATGACCACCTCATGCCCCACATTGACCCACTGTTGACCATCAAGCACGAACTGTTGTCCCGGCCCGCCTGGGAGCCGCCCATCATTACCACACTGTACCCGCCTTACTATGAAGACGTCGCAGACTCCAGCAGGCTTTCCATCATGAACACTGACATATACTAA

Protein

MASQSNTAGPKPSQMFHIPKATTIDKIGGIHCHICKLTFGKKKEYDEHYVGHNTGEKETVYTCVICHKQIAGYRSFQGHCYLKHVVKDRFTCNDCYRMYSKQSLLLKHIASMHTFICKICKQSFTSKNELLIHNIIHKSEKNKAPFPCMTCGKYIDTADMCELHIDEASSFTFPCPVCEESFPNRPEILKHLTKHFDDEIEINTDTKVLIEDCSVNMVGVYCCFCEETFNNRIEYDLHYETEHSDKELVYTCTICKKQYNKYALFGNHCHFHISKNRFECSECGKLFPRLSLLVLHRAAHGPGHDPERPFPCSHCDCTFSTLQRLTEHHRREHPHRDIRCHRPGCDLTFESFKDLILHYPSHSDEYCCRQCGLQFSTLSSCEKHLNVHAIKHYSCPVCNQRYQHKYQLIKHIPQHFETVFHVCTTCGKSYNAKSRLIQHAKTHTLRQFKCTYCRKAFLKDYDLQQHVNIHIGLLPYKCSLCPKAFASYSNHYKHMLRVHNVQPKSKSNLQKNIKDPSKKECHDKDTNEEKQSVVDQKPLEQTIMDTDDSTVESIDPIALEKELQMFNETNNGDTVDGPQLADIQPDNSAVAVFDFQSNNSTFQTSMVPPEYGPDFVNKAIESSAFSGDYIDLDDHLMPHIDPLLTIKHELLSRPAWEPPIITTLYPPYYEDVADSSRLSIMNTDIY

Similarity

Belongs to the krueppel C2H2-type zinc-finger protein family.

Keywords

3D-structure   Cytoplasm   Metal-binding   Phosphoprotein   Repeat   RNA-binding   Zinc   Zinc-finger  

Feature

chain  Zinc finger protein Xfin

Uniprot

H9JVS3   A0A2H1W430   A0A2W1BSU1   A0A2A4ISS2   A0A212EQA0   A0A0N1IP86   + More
A0A194Q1P7   H0WE95   A0A096NFT6   A0A2Y9IH75   A0A2K5MKD8   F7E455   A0A0Q3X7G1   A0A087XHT8   H0WES3   A0A2Y9IGS9   A0A2Y9IKM6   A0A1S3WSH5   G1SDK6   A0A2K6GMV9   K7F9R1   F1R2I1   A0A1S3AIW8   A0A3Q0FUT2   A0A384C3L5   F6VJ35   A0A2K6DH52   A0A0R4ITR1   F7GLK7   A0A2K5NZB4   A0A2K5WP45   A0A0D9RQK4   F1RI76   A0A2K5Y2N5   P08045   A0A1L8FUR3  

EC Number

2.1.1.-

Pubmed

19121390    28756777    22118469    26354079    23594743    20431018    + More
21993624    17381049    19892987    17431167    30723633    2826129    1782138    8398678    7692399    2506074    2503871    27762356   

EMBL

BABH01032444    ODYU01006064    SOQ47592.1    KZ149911    PZC78128.1    NWSH01008507    + More
PCG62536.1    AGBW02013272    OWR43673.1    KQ460542    KPJ14138.1    KQ459579    KPI99502.1    BX296567    AHZZ02034615    AHZZ02034616    AAMC01108200    LMAW01000388    KQL59207.1    AYCK01023677    AYCK01023678    AYCK01023679    AYCK01023680    AYCK01023681    AYCK01023682    AYCK01023683    BX323072    AGCU01031909    AGCU01031910    AGCU01031911    AGCU01031912    AGCU01031913    AGCU01031914    AGCU01031915    AGCU01031916    AGCU01031917    AGCU01031918    CT027586    BX649518    JSUE03022205    JSUE03022206    JSUE03022207    AQIA01036500    AQIB01140821    AQIB01140822    AEMK02000096    DQIR01029923    HCZ85398.1    X06021    CM004476    OCT75326.1   

Proteomes

UP000005204    UP000218220    UP000007151    UP000053240    UP000053268    UP000000437    + More
UP000028761    UP000248482    UP000233060    UP000008143    UP000051836    UP000028760    UP000079721    UP000001811    UP000233160    UP000007267    UP000189705    UP000261680    UP000002281    UP000233120    UP000006718    UP000233100    UP000029965    UP000008227    UP000233140    UP000186698   

PRIDE

H9JVS3    F1RI76   

Pfam

PF00096   zf-C2H2        + More
PF01352   KRAB
PF02023   SCAN

Interpro

IPR013087   Znf_C2H2_type        + More
IPR036236   Znf_C2H2_sf       
IPR036051   KRAB_dom_sf       
IPR001909   KRAB       
IPR038269   SCAN_sf       
IPR003309   SCAN_dom       
IPR001781   Znf_LIM       
IPR003656   Znf_BED       
IPR011017   TRASH_dom       
IPR017125   Znf_PRDM5-like       

SUPFAM

SSF57667   SSF57667        + More
SSF109640   SSF109640       

Gene 3D

1.10.4020.10    

CDD

cd07765  KRAB_A-box
cd07936  SCAN

ProteinModelPortal

H9JVS3   A0A2H1W430   A0A2W1BSU1   A0A2A4ISS2   A0A212EQA0   A0A0N1IP86   + More
A0A194Q1P7   H0WE95   A0A096NFT6   A0A2Y9IH75   A0A2K5MKD8   F7E455   A0A0Q3X7G1   A0A087XHT8   H0WES3   A0A2Y9IGS9   A0A2Y9IKM6   A0A1S3WSH5   G1SDK6   A0A2K6GMV9   K7F9R1   F1R2I1   A0A1S3AIW8   A0A3Q0FUT2   A0A384C3L5   F6VJ35   A0A2K6DH52   A0A0R4ITR1   F7GLK7   A0A2K5NZB4   A0A2K5WP45   A0A0D9RQK4   F1RI76   A0A2K5Y2N5   P08045   A0A1L8FUR3  

PDB

5WJQ     E-value=4.42973e-23,     Score=269

KEGG

101739778    no KO assigned | (RefSeq) oocyte zinc finger protein XlCOF6

GO

GO:0003676   GO:0046872   GO:0006355   GO:0003700   GO:0005634   GO:0003677   GO:0000976   GO:0005737   GO:0003723   GO:0005488   GO:0008013   GO:0007155   GO:0005515   GO:0016021   GO:0045211   GO:0006281   GO:0048384  

Subcellular location

Nucleus  
Cytoplasm  

Length:

686

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0031

Exp number, first 60 AAs:

0.00012

Total prob of N-in:

0.00036

outside

1  -  686

 

 

Pi

170.110484

Theta

168.576297

Tajima's D

0.233987

CLR

1.363813

CSRT

0.433978301084946

Interpretation

Uncertain