Gene

KWMTBOMO03212  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA013637

Annotation

Protein_TBRG4_[Papilio_xuthus]

Location

Bomo_Chr6(-):1737760-1747763      View in EpiBrowser

Location in the cell

Mitochondrial   Reliability : 3.52

CDS

ATGCTAAGGTTCAGCGGATCAATATCTTGGAGGTTAGGTATCAGGGCAATCATAAGAAAGCAGTCGACTACGAACGCTGCCGCCGTAAAAACTGACAAAATCGAGGACACTAAGAATGTTCAAGGAAAAATACCCATTGCGGAAACGTTTAAGGATACTTCAGGCCTCGTAGCCGCTGCATTTGCTCACTTGAACTCTGAAAGTGAAATTACAACAACTAAGAAACCAAGTCCAAAATCAGCTAAGATAAGTCGCCACCAACAGCTCGAGAATCAAATTTCCAAAGCTGCTGATGTGAATTCTCTGCTCCTTGTTGCTGAAAATCCTGTTGTGTCTCGAAGACATGCTTTGAAGATGGTTTCTATCTTATCAGAATGGTCGAGCACTAACAAAGTGAATTTGAATGAATTCGAGAAAGACCCACGTTTTTTAAAGCTATGTAGAATTCTGGCTAGGACCTCAACTACTCATGCGATGAGTTCCTTGACAATGGCAGAGGATCTGAGCACAGTTCTAGGAATAACTGGTGATGATGAGGCAGCCCGTCTGATTTCAAATTTGACGCTGTCACAAATGATAAAGGTAATGAAGGCATTGCAGCAGAAGGGACGTCGCAGCACACCATTACTGCGTGCTCTTTCTCACAACATAACAAGTCAGGCAGAGGTCATTGATCTCAAGAAATCAGCTGATTTACTATTTTCTATGGCTAGCTTAAACTTTCCTGACCCTCTGCTACTGGACAGGATATGCAATGACGTAATAGATAGCTTACCGAAGAACGAAGACAAGCCGGCCGTAGTGAATTCGATAATTGTGTCCCTGGGCCTCATGAAGTACAGACACGAGCCGGCGCTGAACGCCATAACGGAGTGGATGATGGACCACAGCAGCGTCTGCCGCTCCAGCGACGTGGCTTCGGCCGTCGTCACGCTGGCCACCTTAAACTACGTGCCGCCCGGATCCGAAGCTCTGTTTGAGATGGCGCGCTCTCTTAAGGAGGAGGAGGTCGTGAAGCCGTCCACGTGGCTGGACTTGGTCTTCTCGCTCCTCATTCTCGACAAAGCGGATCATCATCACCTGGTATCGACTTTACGACCGGAATTCATCGATAAACTGCTCACGACTGGCGACATCCCGATCCCTTGTCGCCGGAAGCTGATGATGATAGACGCATATATCCAGCTGACGAGGCAGTCTTCCGTCCGCCTCCCCGACGACGTCCGCGAGGGCGTGCCGCTTGTCTACAACAAGGAGAAGGCGCTCTTCATTCACGCCGTGCTCGAAACATTCAGGAGTCTGGTCTCTTCTACCAACTTCCTAAAGAAGGACTGCAATTCGAACATGGGCTTCTTGTACGATGCGGAATTCGCTGTGGACGCCAAGTGTCACCCCGTGCCTCTGGACAAAGCCGCCGGTGATAAAAGCGTGTACAGGATAGCAGTGATGGCGTTGGACTACCACGACATGAGCAGAAGGACGATAGCGCCACTGGGCACCAGCGAACTGGGCGCGCGGCTGTTGCGGCTCAAGGGCTATAGAGTAATACAGATCCATTACACGGACTTCGATCCTAAAGACAAACTGGTGACGAGGGTGCAGTACATAGAGAAATTACTCAAGGAAGCTGTGAATAATAAAAACAATTAG

Protein

MLRFSGSISWRLGIRAIIRKQSTTNAAAVKTDKIEDTKNVQGKIPIAETFKDTSGLVAAAFAHLNSESEITTTKKPSPKSAKISRHQQLENQISKAADVNSLLLVAENPVVSRRHALKMVSILSEWSSTNKVNLNEFEKDPRFLKLCRILARTSTTHAMSSLTMAEDLSTVLGITGDDEAARLISNLTLSQMIKVMKALQQKGRRSTPLLRALSHNITSQAEVIDLKKSADLLFSMASLNFPDPLLLDRICNDVIDSLPKNEDKPAVVNSIIVSLGLMKYRHEPALNAITEWMMDHSSVCRSSDVASAVVTLATLNYVPPGSEALFEMARSLKEEEVVKPSTWLDLVFSLLILDKADHHHLVSTLRPEFIDKLLTTGDIPIPCRRKLMMIDAYIQLTRQSSVRLPDDVREGVPLVYNKEKALFIHAVLETFRSLVSSTNFLKKDCNSNMGFLYDAEFAVDAKCHPVPLDKAAGDKSVYRIAVMALDYHDMSRRTIAPLGTSELGARLLRLKGYRVIQIHYTDFDPKDKLVTRVQYIEKLLKEAVNNKNN

Uniprot

H9JVS4   A0A194Q3B9   A0A2H1VFA6   A0A2W1BUT8   A0A0N0PCX6   A0A2A4IZI3   + More
A0A2A4IQY0   A0A212F2H3   U5EU15   A0A336LU09   A0A2J7QU97   A0A3B0K1M9   A0A1Y1KU67   B4LXU0   A0A2P8ZPJ1   B4JTY0   B4JRB6   A0A1B0BWH5   A0A1A9WNM3   B4G4N5   A0A1B6DEQ9   Q298T6   A0A3B0K1H5   A0A1I8MKR3   A0A1B6CQU6   B4K5D2   A0A1A9XMB2   T1PBN6   J3JXV2   N6TVI4   A0A1A9V8R6   B4NI34   D3TPV4   A0A0T6B588   A0A0M4F6B4   A0A1B0A7V6   A0A067QJ37   A0A0A1WGJ1   Q9VD14   W8B577   A0A0L0CJ33   A0A1W4W2F2   B3M224   B4PLP5   Q16U20   B0W8P8   A0A0K8WKD2   A0A1I8PS97   A0A1Q3FBW7   A0A034WBD3   A0A1S4FPI9   A0A1Q3FBE4   A0A182JBZ6   A0A084VG06   A0A146LFU5   A0A0A9WMB6   A0A146L1G7   A0A182JSE8   J9JL97   A0A182R671   D6X3J3   A0A139WB27   A0A182H8C4   T1HRH0   A0A0V0G942   A0A182QQ10   A0A182X0B3   A0A182N435   W5JF54   B4HE81   Q7PYQ7   A0A182VFZ5   A0A182I003   A0A182LR44   A0A182F972   A0A182P566   A0A182TWY5   A0A2M4BIG8   A0A023F121   A0A1B6GDU3   A0A2M4AP06   A0A1J1I3K7   A0A1B0FI20   A0A182VZ69   A0A182YAP9   A0A1B6K739   A0A2S2NBI1   B3P7J3   A0A0K8T5C1   A0A182SGH8   A0A2R7VUX8   A0A069DUQ7   A0A224XBA1   K7J0N5   A0A232F4J0   A0A182MIC2  

Pubmed

19121390    26354079    28756777    22118469    28004739    17994087    + More
29403074    15632085    25315136    22516182    23537049    20353571    24845553    25830018    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    24495485    26108605    17550304    17510324    25348373    24438588    26823975    25401762    18362917    19820115    26483478    20920257    23761445    12364791    14747013    17210077    20966253    25474469    25244985    26334808    20075255    28648823   

EMBL

BABH01032447    KQ459579    KPI99504.1    ODYU01002258    SOQ39509.1    KZ149911    + More
PZC78131.1    KQ460542    KPJ14142.1    NWSH01004491    PCG65049.1    NWSH01008790    PCG62417.1    AGBW02010745    OWR47923.1    GANO01004096    JAB55775.1    UFQS01000109    UFQT01000109    SSW99749.1    SSX20129.1    NEVH01011186    PNF32162.1    OUUW01000013    SPP88144.1    GEZM01077580    JAV63265.1    CH940650    EDW67899.1    PYGN01000002    PSN58393.1    CH916374    EDV91559.1    CH916373    EDV94306.1    JXJN01021768    CH479179    EDW24551.1    GEDC01013110    JAS24188.1    CM000070    EAL27869.2    SPP88145.1    GEDC01021486    JAS15812.1    CH933806    EDW16158.1    KA646177    AFP60806.1    BT128074    AEE63035.1    APGK01053205    KB741222    ENN72411.1    CH964272    EDW84726.2    EZ423456    ADD19732.1    LJIG01009835    KRT82285.1    CP012526    ALC47575.1    KK853452    KDR07530.1    GBXI01016153    JAC98138.1    AE014297    AY058310    AAF55989.3    AAL13539.1    GAMC01012815    GAMC01012813    JAB93742.1    JRES01000310    KNC32388.1    CH902617    EDV43348.1    CM000160    EDW97994.2    CH477634    EAT38022.1    DS231859    EDS39098.1    GDHF01028179    GDHF01012588    GDHF01000795    JAI24135.1    JAI39726.1    JAI51519.1    GFDL01010052    JAV24993.1    GAKP01006943    GAKP01006942    GAKP01006941    JAC52009.1    GFDL01010154    JAV24891.1    ATLV01012593    KE524806    KFB36900.1    GDHC01012777    JAQ05852.1    GBHO01034022    JAG09582.1    GDHC01017552    JAQ01077.1    ABLF02035222    KQ971374    EEZ97431.2    KYB25154.1    JXUM01118239    KQ566164    KXJ70352.1    ACPB03010481    GECL01001558    JAP04566.1    AXCN02000023    ADMH02001373    ETN62721.1    CH480815    EDW43178.1    AAAB01008987    EAA01053.4    APCN01002028    GGFJ01003696    MBW52837.1    GBBI01003996    JAC14716.1    GECZ01009144    JAS60625.1    GGFK01009190    MBW42511.1    CVRI01000040    CRK94919.1    CCAG010015572    GECU01000439    JAT07268.1    GGMR01001517    MBY14136.1    CH954182    EDV54154.1    GBRD01005094    JAG60727.1    KK854101    PTY11306.1    GBGD01001214    JAC87675.1    GFTR01006791    JAW09635.1    NNAY01001035    OXU25398.1    AXCM01018904   

Proteomes

UP000005204    UP000053268    UP000053240    UP000218220    UP000007151    UP000235965    + More
UP000268350    UP000008792    UP000245037    UP000001070    UP000092460    UP000091820    UP000008744    UP000001819    UP000095301    UP000009192    UP000092443    UP000019118    UP000078200    UP000007798    UP000092553    UP000092445    UP000027135    UP000000803    UP000037069    UP000192221    UP000007801    UP000002282    UP000008820    UP000002320    UP000095300    UP000075880    UP000030765    UP000075881    UP000007819    UP000075900    UP000007266    UP000069940    UP000249989    UP000015103    UP000075886    UP000076407    UP000075884    UP000000673    UP000001292    UP000007062    UP000075903    UP000075840    UP000075882    UP000069272    UP000075885    UP000075902    UP000183832    UP000092444    UP000075920    UP000076408    UP000008711    UP000075901    UP000002358    UP000215335    UP000075883   

PRIDE

H9JVS4    Q9VD14   

Pfam

PF06743   FAST_1        + More
PF08368   FAST_2
PF08373   RAP
PF01217   Clat_adaptor_s

Interpro

IPR010622   FAST_Leu-rich        + More
IPR000253   FHA_dom       
IPR013579   FAST_2       
IPR013584   RAP       
IPR016024   ARM-type_fold       
IPR000804   Clathrin_sm-chain_CS       
IPR016635   AP_complex_ssu       
IPR011012   Longin-like_dom_sf       
IPR022775   AP_mu_sigma_su       

SUPFAM

SSF48371   SSF48371        + More
SSF64356   SSF64356       

ProteinModelPortal

H9JVS4   A0A194Q3B9   A0A2H1VFA6   A0A2W1BUT8   A0A0N0PCX6   A0A2A4IZI3   + More
A0A2A4IQY0   A0A212F2H3   U5EU15   A0A336LU09   A0A2J7QU97   A0A3B0K1M9   A0A1Y1KU67   B4LXU0   A0A2P8ZPJ1   B4JTY0   B4JRB6   A0A1B0BWH5   A0A1A9WNM3   B4G4N5   A0A1B6DEQ9   Q298T6   A0A3B0K1H5   A0A1I8MKR3   A0A1B6CQU6   B4K5D2   A0A1A9XMB2   T1PBN6   J3JXV2   N6TVI4   A0A1A9V8R6   B4NI34   D3TPV4   A0A0T6B588   A0A0M4F6B4   A0A1B0A7V6   A0A067QJ37   A0A0A1WGJ1   Q9VD14   W8B577   A0A0L0CJ33   A0A1W4W2F2   B3M224   B4PLP5   Q16U20   B0W8P8   A0A0K8WKD2   A0A1I8PS97   A0A1Q3FBW7   A0A034WBD3   A0A1S4FPI9   A0A1Q3FBE4   A0A182JBZ6   A0A084VG06   A0A146LFU5   A0A0A9WMB6   A0A146L1G7   A0A182JSE8   J9JL97   A0A182R671   D6X3J3   A0A139WB27   A0A182H8C4   T1HRH0   A0A0V0G942   A0A182QQ10   A0A182X0B3   A0A182N435   W5JF54   B4HE81   Q7PYQ7   A0A182VFZ5   A0A182I003   A0A182LR44   A0A182F972   A0A182P566   A0A182TWY5   A0A2M4BIG8   A0A023F121   A0A1B6GDU3   A0A2M4AP06   A0A1J1I3K7   A0A1B0FI20   A0A182VZ69   A0A182YAP9   A0A1B6K739   A0A2S2NBI1   B3P7J3   A0A0K8T5C1   A0A182SGH8   A0A2R7VUX8   A0A069DUQ7   A0A224XBA1   K7J0N5   A0A232F4J0   A0A182MIC2  

KEGG

101740185    no KO assigned | (RefSeq) protein TBRG4

GO

GO:0004672   GO:0006468   GO:0006886   GO:0030117   GO:0016192   GO:0005515   GO:0008270   GO:0005886   GO:0007155   GO:0016021   GO:0045211   GO:0006281   GO:0048384  

PANTHER

PTHR11753  

Length:

549

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00298

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00048

outside

1  -  549

 

 

Pi

280.220614

Theta

216.309208

Tajima's D

1.133123

CLR

0.332478

CSRT

0.698515074246288

Interpretation

Uncertain