SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO03209
Pre Gene Modal
BGIBMGA013638
Annotation
PREDICTED:_uncharacterized_protein_LOC101740318_[Bombyx_mori]
Location in the cell
PlasmaMembrane   Reliability : 4.929
 

Sequence

CDS
ATGAATAAAGAAGTGGTTGTAACTGATGGCTGCTCTGGTAAAGTTACCGACTCATGTGGTTACGACGAAGCGGTGGAATTAGCTGGGCATGGCCGGTACAACTACACACTGTTGGGAGTGTGTAGTATTATCGTTGTTGCGGTGGCCATAGACATGTTTGGGTACAGCGTGGTAGTGGCCGCTTCTAGCTGTGATCTCGGTGTAGGGCTCAAGGAGACCGGTTTGCTTGCATCGGCGCCTTTTGCTGGATTGCTTTTTGCTTTTCCCTGGGGCTTCTACGCGGATACAAGAGGACGAAGGAAGGCTTTACTGATCTCCACGTCGTTCGGCTTCCTGTTTGCGGCTTTAAGTAGTCTGTCAATGAATTGGCAGTTTATGTTTGCCTCTAAGCTATTTGGATGCGGTTTTTCCACGGCAAGTTTCACATTGGTAATCACCCTGCTCGGCGAATGCACCGGCTCAAGTCACAGAAACGTTTATCTCTTCATGTTGAACAGCGTGAATTTATCATCAGAGATTATTTCATTCAGCTTAGCGTACTTAATCCTTCCACTGAGCTTTCAGCTGGAAGTTCCGTGGTTGGGTATCACTTACCGACCCTGGCGGTTGTACACTTTCATCATGGCTTTACCACTGGGTATAGGAGCTTTGTTGATGCTCTTTATGCACGAGAGCCCTAAGTTTTTGGCGAATAAAGGGGAACTGGATAAAGCTTTGGAAGTCTTGAAGAAGATTTATGCTGCTAACGGAGGAAAAAGAGAAGACTATCCGGTGAAACATATAATAACGGAAGAATTAACTACAGAGAAGAACACATTCTGGAAAACGCTTAGAGAACAAACCGTGCCGATATTCAAACCACCATTGTTGTTGCGGACGGTCCAGCTGTTTTATTTGATGGCACTGTGCTGTAGTATAAACAACGTTTTCTTCATGTGGTTCCCGACAATGGTGAATATATTCTTCAACACGTTATCTGATGTCTGGACCAACGATCAGACGTTCTGCGAACGAGTTTTCTCAAATAAAACTTCAAACTACACTGAGACTGTTATTTGCAACGACGAAATCTCCCACAACACCATCTATTCTGGTATCTTTTACGGTTTCTTCTTCTGCGTGGTGACAGCCATCGTGGCTCAAGGAGCTTCTAGAAGACGAATGCTCCTAATCGGGATCCTGATCGTATCCGGAGTCAGCTGCATCCTAGTGGAACTCAAACATCCCGTCGCTAATATAATTTTCTTTATTTTGATGCAGTCCACGGCAATAGGAATCGGAAATGTGTGTTCTTATTTTGTTGACGTATATCCTACTTCTTATAGAGGTCTCGCGACAAGCTTAGGAATGATGACAGCACGGCTCGTCTCGTTCGCCGGAGTGAATATAATCGGAAACGTCATTACTGACTATTGTACGCCCACTTTCTACATTTCTGCCGCTTTCGTATTCAGCGGTGTGATCGTGTGTTTCTTTTTACCTGCAGACAGAAAAACTAACGAATGA
Protein
MNKEVVVTDGCSGKVTDSCGYDEAVELAGHGRYNYTLLGVCSIIVVAVAIDMFGYSVVVAASSCDLGVGLKETGLLASAPFAGLLFAFPWGFYADTRGRRKALLISTSFGFLFAALSSLSMNWQFMFASKLFGCGFSTASFTLVITLLGECTGSSHRNVYLFMLNSVNLSSEIISFSLAYLILPLSFQLEVPWLGITYRPWRLYTFIMALPLGIGALLMLFMHESPKFLANKGELDKALEVLKKIYAANGGKREDYPVKHIITEELTTEKNTFWKTLREQTVPIFKPPLLLRTVQLFYLMALCCSINNVFFMWFPTMVNIFFNTLSDVWTNDQTFCERVFSNKTSNYTETVICNDEISHNTIYSGIFYGFFFCVVTAIVAQGASRRRMLLIGILIVSGVSCILVELKHPVANIIFFILMQSTAIGIGNVCSYFVDVYPTSYRGLATSLGMMTARLVSFAGVNIIGNVITDYCTPTFYISAAFVFSGVIVCFFLPADRKTNE

Summary

EMBL
KQ459579    KPI99507.1    KPI99506.1    JTDY01010086    KOB61253.1    KZ149911    + More
PZC78134.1    JTDY01001109    KOB74851.1    KQ460542    KPJ14146.1    ODYU01011202    SOQ56787.1    KPJ14144.1    KPI99535.1    ODYU01008516    SOQ52184.1    AGBW02010212    OWR48924.1    KPI99511.1    NWSH01002380    PCG68430.1    ODYU01000151    SOQ34432.1    BABH01037389    PZC78141.1    KPI99493.1    ODYU01009141    SOQ53353.1    KZ150202    PZC72277.1    ODYU01004504    SOQ44451.1    AGBW02011638    OWR46364.1    ODYU01006861    SOQ49086.1    KPJ14129.1    KPJ14131.1    AGBW02013272    OWR43679.1    PCG68429.1    ODYU01011059    SOQ56557.1    BABH01032396    BABH01032397    BABH01032398    BABH01032399    SOQ44452.1    KZ149979    PZC75844.1    SOQ34435.1    AGBW02011653    OWR46341.1    NWSH01000659    PCG74966.1    BABH01032458    KPI99491.1    KPI99495.1    NWSH01001089    PCG72680.1    BABH01032453    JTDY01000209    KOB78282.1    ODYU01005122    SOQ45674.1    KPJ14127.1    PCG72686.1    PCG72687.1    PZC78136.1    AGBW02008612    OWR52914.1    SOQ49085.1    ODYU01004537    SOQ44529.1    NWSH01000098    PCG79585.1    ODYU01012422    SOQ58716.1    BABH01032426    BABH01032427    BABH01032428    BABH01032429    KQ459603    KPI92884.1    KQ461194    KPJ06947.1    ODYU01012108    SOQ58229.1    PZC75843.1    KPI92885.1    PCG72679.1    AGBW02011241    OWR46942.1    NWSH01000457    PCG76268.1    BABH01032418    BABH01032419    BABH01032420    BABH01032421    BABH01032422    BABH01032423    ODYU01012071    SOQ58176.1    KQ971312    EEZ97917.1    KPJ06948.1    KA646499    AFP61128.1    PCG72678.1    AGBW02010155    OWR49057.1    JRES01001303    KNC23749.1    AAAB01008952    EGK97241.1    KA644899    AFP59528.1    AGBW02011907    OWR45939.1    DS231971    EDS29763.1    DS231834    EDS32608.1    AGBW02011531    OWR46513.1    SOQ52183.1    PZC78135.1    GFDL01006485    JAV28560.1    CH477251    EAT46035.1    GFDG01001242    JAV17557.1    GFDG01001241    JAV17558.1    AY380837    AAQ88394.1    GFDG01001245    JAV17554.1    APGK01052662    KB741213    ENN72643.1    EZ423334    ADD19610.1    PCG72684.1   
Pfam
PF07690   MFS_1        + More
PF00083   Sugar_tr
Interpro
IPR020846   MFS_dom        + More
IPR011701   MFS       
IPR036259   MFS_trans_sf       
IPR005828   MFS_sugar_transport-like       
IPR005829   Sugar_transporter_CS       
SUPFAM
SSF103473   SSF103473       
PDB
4YBQ     E-value=0.00511787,     Score=95

Ontologies

Topology

Length:
501
Number of predicted TMHs:
12
Exp number of AAs in TMHs:
253.97086
Exp number, first 60 AAs:
22.64206
Total prob of N-in:
0.99352
POSSIBLE N-term signal
sequence
inside
1  -  36
TMhelix
37  -  59
outside
60  -  73
TMhelix
74  -  93
inside
94  -  101
TMhelix
102  -  121
outside
122  -  125
TMhelix
126  -  148
inside
149  -  160
TMhelix
161  -  183
outside
184  -  202
TMhelix
203  -  222
inside
223  -  295
TMhelix
296  -  318
outside
319  -  361
TMhelix
362  -  384
inside
385  -  388
TMhelix
389  -  406
outside
407  -  410
TMhelix
411  -  433
inside
434  -  445
TMhelix
446  -  468
outside
469  -  472
TMhelix
473  -  495
inside
496  -  501
 
 

Population Genetic Test Statistics

Pi
222.328322
Theta
159.133647
Tajima's D
1.055919
CLR
0.404568
CSRT
0.681065946702665
Interpretation
Uncertain
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