Gene

KWMTBOMO03208

Pre Gene Modal

BGIBMGA013576

Annotation

PREDICTED:_organic_cation/carnitine_transporter_7-like_[Bombyx_mori]

Location

Bomo_Chr6(+):1586464-1632025      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.927

CDS

ATGCTCTGCAGTAGCATCATAGCAGCCATGGTCTTCGAGCTTTACTCCGTATCATATCTCGTGCCGGCTAGTGCCTGCGAGCTGAACACCACCAGTACGCAGCAAGGATTGATGGCTGGTCTCCCATTAATCGGTGTGATCACAACCTCACACATTTGGGGGTATTTAGCCGACACTCGAGGCAGAAAGAAGATGCTCTGCATTTCCATGATCATTGGCTTCGTGGCTGGTTCGTCAGCAGCCCTGGCCCCCAACTGGATCGTGCTTAGCATACTAAAGTTCCTGTCTTCGGCTGCGGTATCGGGATCATCAGCGTTGGCTTTAGCACTGATAGGGGAGTGCACTCCTGCGATACGCCGGAGTACCATGCTGCTACTCACCACCAGCGCGCTGCTATCGAGCACCGGGGTCATGGCCATACTCTCGATACCGATCCTGCCAATGAAGTTCTCCTACTACATACCGATCCTGAACATCCACTTCAACTCCTGGCGCCTTCTAAATGTGATCTTCAGTCTGCCGTGTGCTCTAAACGCGATCGGTTCGATGTGCTGTTATGAAAGTCCAAAGTATTTGCTGAGCGTTGGAGAAGATGAAAAAGCGTTGGAGATCCTTCAGGGAATTTTTAAGCATAACAGCGGAAAGAGCGCAGATTTATACCAGGTGGAGTCAATAGTTCTAGATGAAGATAACGCGAATAAGAAAGCCAAGGGTTTCTGGGAGGTGCTTGCCGAGCAGACGCTACCTTTATTCAAACCACCGCTACTGAAGAGTACGCTATTACTCGGTTTCATGTTCATCTTAGTTTTCATTTGCATAAACTCATTCTTAGTTTGGCTTCCATTCATGGTGGACGCTTTTATGTCTTCGGTGGAGAAAGGATACTCCGGCATGACCATGTGCGAAATGATTAGGGTGGCCAGGAATGAAACCGACCTGGAAGAGACAAATTCCACTTGCTCTATGAACAGAGTGGCCATGACCATGGTTTTCGGTATCTGCATAGTTCTGGCCGTCTTGAACGTGGTGGCTAGTGGCGTAATCAGCATCATAGGCAAGAGGAGACTATTTATAGGCATACAGGTGATGGCCGGTGTAAGCAGTATCTTACTGAACGTGAGCTCCATGTGGGTAGTAAGCGCTCTTCTCTTCATAGCGGTTCTATCTGATGTCATCAACTTTGGATTCCTGTCAGCATTCGCTGTGGACCTGTATCCAACTTTTGTGAAGGCGAAGGCCATATGCCTGATGGTGATGCTGGGTCGCGGCAGCACGATCCTCGGCATCAACGTGCTCAAGAGCCTCATCGAGACGAACTGCGAAGCTGCCTTTTATCTATTCGGAGGGATCACTCTAGCCGGTGGACTCTTCGGATTCCTGCTTCCTCCAGACGGGAATCTATTCAAACAGAAAACTAAAATCTAA

Protein

MLCSSIIAAMVFELYSVSYLVPASACELNTTSTQQGLMAGLPLIGVITTSHIWGYLADTRGRKKMLCISMIIGFVAGSSAALAPNWIVLSILKFLSSAAVSGSSALALALIGECTPAIRRSTMLLLTTSALLSSTGVMAILSIPILPMKFSYYIPILNIHFNSWRLLNVIFSLPCALNAIGSMCCYESPKYLLSVGEDEKALEILQGIFKHNSGKSADLYQVESIVLDEDNANKKAKGFWEVLAEQTLPLFKPPLLKSTLLLGFMFILVFICINSFLVWLPFMVDAFMSSVEKGYSGMTMCEMIRVARNETDLEETNSTCSMNRVAMTMVFGICIVLAVLNVVASGVISIIGKRRLFIGIQVMAGVSSILLNVSSMWVVSALLFIAVLSDVINFGFLSAFAVDLYPTFVKAKAICLMVMLGRGSTILGINVLKSLIETNCEAAFYLFGGITLAGGLFGFLLPPDGNLFKQKTKI

Uniprot

H9JVL3   A0A2H1V0R1   A0A2H1VUK7   A0A2A4JT62   A0A2W1BZI9   A0A194Q2E7   + More
A0A212FI93   A0A2W1BWW5   A0A0N1I9N3   A0A194Q2D2   A0A0N1IG89   A0A2H1WI98   A0A2A4JMQ7   A0A212F5P7   A0A2A4JLI7   A0A2A4JLT5   A0A2H1WGI5   A0A2H1V250   A0A194Q3A9   A0A212EY43   A0A2W1BUU8   A0A212EY03   A0A0N1I9M8   A0A0N0PCN2   A0A194QN61   A0A2A4K5Q7   A0A194PP30   A0A2A4JLN1   A0A194Q1T6   A0A2A4JKW1   A0A0N1IPG1   A0A2H1W801   A0A2H1W7K7   A0A194Q1R5   H9JVM2   A0A212EYD8   H9JVR6   A0A194PJI3   A0A194Q1T1   A0A2A4JX40   A0A212EQC0   A0A194QN48   H9JVR7   A0A2H1VUC9   A0A2H1WYY1   A0A2H1X0I9   A0A194Q1Q2   A0A194Q7W0   A0A212EZN8   A0A0L7KD47   H9JV72   A0A2H1WYT6   A0A2A4J999   A0A194Q800   A0A212F5C2   W8AY09   A0A034VLH4   A0A1J1HSM7   A0A0K8UH50   A0A034VFR0   U5ETH9   W8C469   A0A0K8U925   A0A336KU37   H9JVL1   A0A0N0PCK2   A0A0A1XKB5   B0WKE4   A0A0A1XE46   A0A2A4JAH3   A0A1L8EFQ6   A0A1L8EFU2   A0A1L8EFY3   A0A2H1WJU4   A0A1Q3FLR3   Q6U1H2   A0A1I8P1U8   A0A1I8MVX6   A0A1I8PH06   A0A1I8MVY3   A0A1J1HFZ0   A0A1I8P1R5   T1PCW5   T1P8E1   A0A182YEX8   A0A1B6G7N2   A0A2W1BGE8   B0W415   A0A1Q3FR20   A0A0L0BWY3   A0A1Q3FRJ7   A0A2H1WNU1   A0A1B6I2U3  

Pubmed

19121390    28756777    26354079    22118469    26227816    24495485    + More
25348373    25830018    15157223    25315136    25244985    26108605   

EMBL

BABH01032453    ODYU01000151    SOQ34435.1    ODYU01004537    SOQ44529.1    NWSH01000659    + More
PCG74966.1    KZ149911    PZC78136.1    KQ459579    KPI99508.1    AGBW02008417    OWR53448.1    PZC78135.1    KQ460542    KPJ14146.1    KPI99493.1    KPJ14129.1    ODYU01008516    SOQ52184.1    NWSH01001089    PCG72680.1    AGBW02010155    OWR49057.1    PCG72679.1    PCG72678.1    SOQ52183.1    SOQ34432.1    KPI99494.1    AGBW02011638    OWR46364.1    PZC78141.1    AGBW02011653    OWR46341.1    KPJ14130.1    KPJ14131.1    KQ461194    KPJ06947.1    NWSH01000098    PCG79585.1    KQ459603    KPI92885.1    PCG72686.1    KPI99511.1    PCG72687.1    KPJ14127.1    ODYU01006861    SOQ49086.1    SOQ49085.1    KPI99491.1    BABH01032396    BABH01032397    BABH01032398    BABH01032399    AGBW02011531    OWR46513.1    BABH01032418    BABH01032419    BABH01032420    BABH01032421    BABH01032422    BABH01032423    KPI92884.1    KPI99506.1    NWSH01000457    PCG76268.1    AGBW02013272    OWR43679.1    KPJ06948.1    BABH01032426    BABH01032427    BABH01032428    BABH01032429    ODYU01004504    SOQ44451.1    ODYU01012071    SOQ58176.1    ODYU01012422    SOQ58716.1    KPI99507.1    KPI99495.1    AGBW02011241    OWR46942.1    JTDY01010086    KOB61253.1    BABH01037389    ODYU01012108    SOQ58229.1    NWSH01002380    PCG68429.1    KPI99535.1    AGBW02010212    OWR48924.1    GAMC01012655    JAB93900.1    GAKP01015980    JAC42972.1    CVRI01000020    CRK91005.1    GDHF01026325    JAI25989.1    GAKP01018554    JAC40398.1    GANO01004365    JAB55506.1    GAMC01009766    JAB96789.1    GDHF01029221    JAI23093.1    UFQS01000919    UFQT01000919    SSX07668.1    SSX28006.1    BABH01032458    KPJ14144.1    GBXI01002836    JAD11456.1    DS231971    EDS29763.1    GBXI01004603    JAD09689.1    PCG68430.1    GFDG01001242    JAV17557.1    GFDG01001241    JAV17558.1    GFDG01001245    JAV17554.1    ODYU01009141    SOQ53353.1    GFDL01006485    JAV28560.1    AY380837    AAQ88394.1    CVRI01000002    CRK86895.1    KA646499    AFP61128.1    KA644899    AFP59528.1    GECZ01011345    JAS58424.1    KZ150202    PZC72277.1    DS231834    EDS32608.1    GFDL01005008    JAV30037.1    JRES01001303    KNC23749.1    GFDL01004992    JAV30053.1    ODYU01009931    SOQ54677.1    GECU01026455    JAS81251.1   

Proteomes

UP000005204    UP000218220    UP000053268    UP000007151    UP000053240    UP000037510    + More
UP000183832    UP000002320    UP000095300    UP000095301    UP000076408    UP000037069   

PRIDE

H9JVL3    H9JVM2    H9JVR6    H9JVR7    H9JV72    H9JVL1    + More

Pfam

PF07690   MFS_1        + More
PF00083   Sugar_tr
PF12937   F-box-like

Interpro

IPR020846   MFS_dom        + More
IPR036259   MFS_trans_sf       
IPR011701   MFS       
IPR005828   MFS_sugar_transport-like       
IPR032675   LRR_dom_sf       
IPR036047   F-box-like_dom_sf       
IPR001810   F-box_dom       

SUPFAM

SSF103473   SSF103473        + More
SSF81383   SSF81383       

Gene 3D

3.80.10.10    

CDD

cd06174  MFS

ProteinModelPortal

H9JVL3   A0A2H1V0R1   A0A2H1VUK7   A0A2A4JT62   A0A2W1BZI9   A0A194Q2E7   + More
A0A212FI93   A0A2W1BWW5   A0A0N1I9N3   A0A194Q2D2   A0A0N1IG89   A0A2H1WI98   A0A2A4JMQ7   A0A212F5P7   A0A2A4JLI7   A0A2A4JLT5   A0A2H1WGI5   A0A2H1V250   A0A194Q3A9   A0A212EY43   A0A2W1BUU8   A0A212EY03   A0A0N1I9M8   A0A0N0PCN2   A0A194QN61   A0A2A4K5Q7   A0A194PP30   A0A2A4JLN1   A0A194Q1T6   A0A2A4JKW1   A0A0N1IPG1   A0A2H1W801   A0A2H1W7K7   A0A194Q1R5   H9JVM2   A0A212EYD8   H9JVR6   A0A194PJI3   A0A194Q1T1   A0A2A4JX40   A0A212EQC0   A0A194QN48   H9JVR7   A0A2H1VUC9   A0A2H1WYY1   A0A2H1X0I9   A0A194Q1Q2   A0A194Q7W0   A0A212EZN8   A0A0L7KD47   H9JV72   A0A2H1WYT6   A0A2A4J999   A0A194Q800   A0A212F5C2   W8AY09   A0A034VLH4   A0A1J1HSM7   A0A0K8UH50   A0A034VFR0   U5ETH9   W8C469   A0A0K8U925   A0A336KU37   H9JVL1   A0A0N0PCK2   A0A0A1XKB5   B0WKE4   A0A0A1XE46   A0A2A4JAH3   A0A1L8EFQ6   A0A1L8EFU2   A0A1L8EFY3   A0A2H1WJU4   A0A1Q3FLR3   Q6U1H2   A0A1I8P1U8   A0A1I8MVX6   A0A1I8PH06   A0A1I8MVY3   A0A1J1HFZ0   A0A1I8P1R5   T1PCW5   T1P8E1   A0A182YEX8   A0A1B6G7N2   A0A2W1BGE8   B0W415   A0A1Q3FR20   A0A0L0BWY3   A0A1Q3FRJ7   A0A2H1WNU1   A0A1B6I2U3  

PDB

4LDS     E-value=0.0166492,     Score=90

KEGG

101740450    no KO assigned | (RefSeq) organic cation/carnitine transporter 7-like

GO

GO:0016021   GO:0055085   GO:0022857   GO:0020037   GO:0005886   GO:0007155   GO:0005515   GO:0045211   GO:0006281   GO:0048384  

SignalP

Position:   1 - 25,         Likelihood:  0.506842

 

 

Length:

474

Number of predicted TMHs:

12

Exp number of AAs in TMHs:

234.10883

Exp number, first 60 AAs:

37.15481

Total prob of N-in:

0.82441

POSSIBLE N-term signal

sequence

inside

1  -  1

TMhelix

2  -  21

outside

22  -  35

TMhelix

36  -  55

inside

56  -  66

TMhelix

67  -  89

outside

90  -  93

TMhelix

94  -  111

inside

112  -  123

TMhelix

124  -  146

outside

147  -  160

TMhelix

161  -  183

inside

184  -  259

TMhelix

260  -  282

outside

283  -  328

TMhelix

329  -  351

inside

352  -  355

TMhelix

356  -  373

outside

374  -  377

TMhelix

378  -  400

inside

401  -  412

TMhelix

413  -  432

outside

433  -  441

TMhelix

442  -  461

inside

462  -  474

 

 

Pi

195.445126

Theta

150.807126

Tajima's D

0.92499

CLR

0.449275

CSRT

0.636118194090295

Interpretation

Uncertain