Gene

KWMTBOMO03206

Annotation

PREDICTED:_synaptic_vesicle_glycoprotein_2B-like_[Amyelois_transitella]

Location

Bomo_Chr6(-):1517747-1521392      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.299

CDS

ATGAGGGAACCAGGCCAGGGAATAGGTGGTGTCGCGAGTGCGTTCTTCTGGGGTATTGTGGGCGATGTCTTCGGCAGGAAGAGCACCCTAAGCTTGACATTGCTCCTGGACGCAGCGATAACTTTAGCCCAGAGCACCGTTCCAGACTACAGACTTCTGCTGGCAGCTAGAACCATCAATGGGTTCATTATAGGAGGTCCAGCTACACTGGTCTTTACGTATTTATCAGACCTAGTTGGAGTTAAGAAGAGACAATTCTATCTTAGCATGGTGGGAATGAGTTTTGTTGCGGCCTGGTTACTTTTGCCTGGATTCACTAAATAG

Protein

MREPGQGIGGVASAFFWGIVGDVFGRKSTLSLTLLLDAAITLAQSTVPDYRLLLAARTINGFIIGGPATLVFTYLSDLVGVKKRQFYLSMVGMSFVAAWLLLPGFTK

Uniprot

A0A2W1BZ69   A0A2A4JP45   A0A2H1V0P6   A0A0N1IEI8   A0A212EXZ1   A0A194Q7X5   + More
A0A1B6DD61   A0A0C9RT66   A0A0C9PZZ9   A0A151XCA7   A0A0L7QLM7   A0A0M9A095   A0A310SDB3   A0A154NYA8   A0A195B1S0   A0A158NLE1   E2ATB0   E2BMY5   A0A088AG68   F4WW57   A0A2A3EPR0   A0A195CY83   A0A1W4WFM4   A0A195F2P9   A0A3L8D687   A0A026WID1   E0VD11   A0A195E6G9   A0A0T6B5Y4   E2BMY6   W8C4Z8   R4WRQ1   A0A1I8PT34   A0A1I8PT04   A0A087XTG0   A0A146LC37   A0A3B4DUA9   W5L2M0   A0A1L8H0Z8   T1PAI7   A0A1I8M6J6   A0A3B4VPU2   A0A3B5MH50   E0W3U1   A0A1A7XXM3   A0A0K8SJZ1   A0A3P9Q0K1   A0A096M6X8   A0A146W9Q5   M4AWZ8   A0A3B3VJ41   F6QL33   A0A0A9WZX1   A0A3B3X3B6   A0A3B5AD85   A0A2U9BA84   A0A1A7Y1V0   A0A146P368   A0A0K8VAX0   H2VCQ2   A2CF25   A0A1S3KZJ5   A0A3P8S2E0   A0A286Y8C7   A0A1A7ZLP8   A0A1Y1LT93   B4LZI9   A0A1L8HRE3   A0A1A8ETI5   U4UDT0   J3JVU6   A0A2D0PPV4   G1N043   G1N9R7   A0A3P9JS84   M3W047   A0A3P9JT06   A0A3B3I7N0   H2LA02   A0A3P9BH25   A0A0K8VDZ3   A0A3P9KX51   A0A3P8ZMG2   F6W539   A0A1L8I228   A0A3P8R9Z4   A0A3P9BH20   A0A3P8VU01   A0A3B4FCV0   A0A0A1XHP3   N6U3Q5   H3DB15   U4U2W7   A0A3B3CD39   A0A3B4AWN8   H3D7I9   Q4S265   A0A3B4AVC8   B4LAH0  

Pubmed

28756777    26354079    22118469    21347285    20798317    21719571    + More
30249741    24508170    20566863    24495485    23691247    26823975    25329095    27762356    25315136    23542700    20431018    25401762    21551351    23594743    28004739    17994087    23537049    22516182    20838655    17554307    17975172    25186727    25069045    24487278    25830018    15496914    29451363    25463417   

EMBL

KZ149911    PZC78140.1    NWSH01000857    PCG73827.1    ODYU01000151    SOQ34433.1    + More
KQ460542    KPJ14148.1    AGBW02011638    OWR46363.1    KQ459579    KPI99510.1    GEDC01013690    JAS23608.1    GBYB01011890    JAG81657.1    GBYB01007148    JAG76915.1    KQ982314    KYQ58026.1    KQ414914    KOC59533.1    KQ435801    KOX73253.1    KQ775195    OAD52273.1    KQ434773    KZC04008.1    KQ976662    KYM78421.1    ADTU01019324    GL442545    EFN63355.1    GL449382    EFN82889.1    GL888404    EGI61528.1    KZ288197    PBC33718.1    KQ977115    KYN05613.1    KQ981864    KYN34369.1    QOIP01000012    RLU15749.1    KK107185    EZA55807.1    DS235070    EEB11267.1    KQ979568    KYN20768.1    LJIG01009608    KRT82740.1    EFN82890.1    GAMC01009291    JAB97264.1    AK418431    BAN21601.1    AYCK01003184    AYCK01003185    AYCK01003186    GDHC01014499    JAQ04130.1    CM004470    OCT89763.1    KA645786    AFP60415.1    DS235883    EEB20297.1    HADX01000655    SBP22887.1    GBRD01012207    JAG53617.1    GCES01059530    JAR26793.1    AAMC01021764    GBHO01030315    JAG13289.1    CP026246    AWP00672.1    HADX01002170    SBP24402.1    GCES01147994    JAQ38328.1    GDHF01016291    JAI36023.1    BX294131    CR854913    HADY01004465    HAEJ01005941    SBP42950.1    GEZM01047127    JAV76924.1    CH940650    EDW67128.1    CM004467    OCT98658.1    HAEB01003650    SBQ50177.1    KB632277    ERL91212.1    BT127364    AEE62326.1    AANG04001174    GDHF01015150    JAI37164.1    AAMC01037688    AAMC01037689    AAMC01037690    AAMC01037691    AAMC01037692    CM004466    OCU02410.1    GBXI01003857    JAD10435.1    APGK01043766    APGK01043767    KB741017    ENN75251.1    KB631644    ERL84936.1    CAAE01014764    CAG05267.1    CH934611    EDW17078.2   

Proteomes

UP000218220    UP000053240    UP000007151    UP000053268    UP000075809    UP000053825    + More
UP000053105    UP000076502    UP000078540    UP000005205    UP000000311    UP000008237    UP000005203    UP000007755    UP000242457    UP000078542    UP000192223    UP000078541    UP000279307    UP000053097    UP000009046    UP000078492    UP000095300    UP000028760    UP000261440    UP000018467    UP000186698    UP000095301    UP000261420    UP000261380    UP000242638    UP000002852    UP000261500    UP000008143    UP000261480    UP000261400    UP000246464    UP000005226    UP000000437    UP000087266    UP000265080    UP000008792    UP000030742    UP000221080    UP000001645    UP000265200    UP000011712    UP000001038    UP000265160    UP000265180    UP000265140    UP000265100    UP000265120    UP000261460    UP000019118    UP000007303    UP000261560    UP000261520    UP000009192   

Pfam

PF07690   MFS_1        + More
PF00083   Sugar_tr
PF00805   Pentapeptide
PF13599   Pentapeptide_4

Interpro

IPR020846   MFS_dom        + More
IPR011701   MFS       
IPR036259   MFS_trans_sf       
IPR005828   MFS_sugar_transport-like       
IPR005829   Sugar_transporter_CS       
IPR022308   SV2       
IPR001646   5peptide_repeat       

SUPFAM

SSF103473   SSF103473       

CDD

cd06174  MFS

ProteinModelPortal

A0A2W1BZ69   A0A2A4JP45   A0A2H1V0P6   A0A0N1IEI8   A0A212EXZ1   A0A194Q7X5   + More
A0A1B6DD61   A0A0C9RT66   A0A0C9PZZ9   A0A151XCA7   A0A0L7QLM7   A0A0M9A095   A0A310SDB3   A0A154NYA8   A0A195B1S0   A0A158NLE1   E2ATB0   E2BMY5   A0A088AG68   F4WW57   A0A2A3EPR0   A0A195CY83   A0A1W4WFM4   A0A195F2P9   A0A3L8D687   A0A026WID1   E0VD11   A0A195E6G9   A0A0T6B5Y4   E2BMY6   W8C4Z8   R4WRQ1   A0A1I8PT34   A0A1I8PT04   A0A087XTG0   A0A146LC37   A0A3B4DUA9   W5L2M0   A0A1L8H0Z8   T1PAI7   A0A1I8M6J6   A0A3B4VPU2   A0A3B5MH50   E0W3U1   A0A1A7XXM3   A0A0K8SJZ1   A0A3P9Q0K1   A0A096M6X8   A0A146W9Q5   M4AWZ8   A0A3B3VJ41   F6QL33   A0A0A9WZX1   A0A3B3X3B6   A0A3B5AD85   A0A2U9BA84   A0A1A7Y1V0   A0A146P368   A0A0K8VAX0   H2VCQ2   A2CF25   A0A1S3KZJ5   A0A3P8S2E0   A0A286Y8C7   A0A1A7ZLP8   A0A1Y1LT93   B4LZI9   A0A1L8HRE3   A0A1A8ETI5   U4UDT0   J3JVU6   A0A2D0PPV4   G1N043   G1N9R7   A0A3P9JS84   M3W047   A0A3P9JT06   A0A3B3I7N0   H2LA02   A0A3P9BH25   A0A0K8VDZ3   A0A3P9KX51   A0A3P8ZMG2   F6W539   A0A1L8I228   A0A3P8R9Z4   A0A3P9BH20   A0A3P8VU01   A0A3B4FCV0   A0A0A1XHP3   N6U3Q5   H3DB15   U4U2W7   A0A3B3CD39   A0A3B4AWN8   H3D7I9   Q4S265   A0A3B4AVC8   B4LAH0  

KEGG

101740723    K06258 MFS transporter, VNT family, synaptic vesicle glycoprotein 2 | (RefSeq) synaptic vesicle glyc

PATHWAY

04512    ECM-receptor interaction - Bombyx mori (domestic silkworm)

GO

GO:0055085   GO:0016021   GO:0022857   GO:0005215   GO:0007268   GO:0043005   GO:0030672   GO:0008021   GO:0016020   GO:0005886   GO:0007155   GO:0005515   GO:0045211   GO:0006281   GO:0048384  

Length:

107

Number of predicted TMHs:

3

Exp number of AAs in TMHs:

59.78817

Exp number, first 60 AAs:

24.36475

Total prob of N-in:

0.89916

POSSIBLE N-term signal

sequence

inside

1  -  6

TMhelix

7  -  24

outside

25  -  52

TMhelix

53  -  75

inside

76  -  86

TMhelix

87  -  106

outside

107  -  107

 

 

Pi

177.7318

Theta

146.739819

Tajima's D

-0.220288

CLR

0.000012

CSRT

0.311184440777961

Interpretation

Uncertain