Gene

KWMTBOMO03204

Pre Gene Modal

BGIBMGA013574

Annotation

PREDICTED:_synaptic_vesicle_glycoprotein_2B_[Papilio_xuthus]

Location

Bomo_Chr6(+):1494633-1504981      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.491

CDS

ATGTTATTAATGACCTGCCTATTGTTATTAGCACCAGCTGTTTCTGGAGTTTTAACCTATCCCACGTTGAAGTTAGACTTCGCCACGGACCTATCAACTATAGGAGTCGTCTACAAGCCTTGGAGGTTGCTCATCATCGTACTGGCTCTTCCACTAGGAATGGGTGCATTAGCCATGTTTTTCTTTTACGAATCTCCAAAATTCCTTTTCAACTGTGGAAGAAAAGACGAAGCTATGGAGGTGCTGAAGGGAATTTACGCTATCAACCATAGAACCTCGAAAAATAACTACAAGATTCGGTTAATGAAAATAGAAAGAAAAACAGAAACGAAATCGGCATCTATCTGGCGCGCCGTTTACGAACAGAGCGCTCCCCTATTTCGCGAGCCGTATCTCCTGAGAAGCCTGCAGCTGTTCTACATTGTTTCCGTGGCGTACATCACCAATAACAGCTTCTTGATCTGGCTCCCGCACATCATGGAGCAAGTTAGGAAATCCTTACAAGCTAACGGCACTAGAACCGGTAACGTCTGTGAACTGATTCATACGGAAGCAACAGGAAATCTTTCCTCAAGCGACTCCTCGGAGAACTGCTTGGGAACCGTGGAAGATAACGTGGTATTCACTCTCATAATATCCCAGACCATATTTTCCCTTTTAAACTTTGTATTATCTTATCTACCCAACCACCGAAGGCCGGTGCTCCTCACAGTTCTGTCCGTCTCAGCCGTGAGCGGGGTCCTGATCAACTTGACGCCGGAGACAATATCCAGTGTGATATTCTTCATGATGTTCACTTGCACTTGCTTGGGTATGGGGATCATGGCGTCCTATTTTGTGGACCTGTACCCAACATCTCACAGGGGAATGGTGACGTGCCTAAGTATCATGGTGGGCAGGAGTTCGGCATTCATGGGAATCAATTTAGTTGGACACCTCATATTCAACTACTGTCAGTTAACATTTTATCTCTGGTCTTTGTTGGTTTTAACCAGTGTCGTGGCAGCATGGTTTCTTCCCCCAGATCGACATGAGAAGCTGAAAACGTCTAACTGA

Protein

MLLMTCLLLLAPAVSGVLTYPTLKLDFATDLSTIGVVYKPWRLLIIVLALPLGMGALAMFFFYESPKFLFNCGRKDEAMEVLKGIYAINHRTSKNNYKIRLMKIERKTETKSASIWRAVYEQSAPLFREPYLLRSLQLFYIVSVAYITNNSFLIWLPHIMEQVRKSLQANGTRTGNVCELIHTEATGNLSSSDSSENCLGTVEDNVVFTLIISQTIFSLLNFVLSYLPNHRRPVLLTVLSVSAVSGVLINLTPETISSVIFFMMFTCTCLGMGIMASYFVDLYPTSHRGMVTCLSIMVGRSSAFMGINLVGHLIFNYCQLTFYLWSLLVLTSVVAAWFLPPDRHEKLKTSN

Uniprot

H9JVL1   A0A2W1BUU8   A0A2H1V250   A0A194Q1T6   A0A212EY43   A0A2H1WI98   + More
A0A2A4JL38   A0A0L7K4N0   A0A194Q2D2   H9JVM2   A0A0N1IG89   A0A2A4JAH3   A0A194Q800   A0A194Q1Q2   A0A2A4IYX6   A0A194Q1T1   A0A2H1WJU4   A0A2W1BVQ5   A0A0L7L435   A0A212FGQ8   A0A2H1V0R1   A0A212F5C2   A0A2H1VUC9   A0A2A4J999   A0A0N0PCK2   A0A2W1BGE8   H9JV72   A0A2H1W801   S4Q006   A0A0N1I9N3   A0A2A4JT62   A0A2H1WUV1   A0A2W1BZI9   A0A2H1VEB4   A0A0L7LHZ8   A0A2H1VUK7   A0A2H1WU82   A0A2H1VVE4   A0A0N0PCN2   A0A2W1BWY0   H9JVL3   A0A2H1WGI5   A0A2A4JX40   A0A194Q1R5   A0A212EQC0   A0A0N1IPG1   H9JVR6   A0A2H1W7K7   A0A1Q3FNL7   A0A1Q3FNK2   A0A1I8P9Y1   B0W415   A0A2A4JKW1   A0A2A4JLN1   A0A1Q3FM89   A0A1Q3FLR3   A0A034VU45   T1GER7   A0A034VUT9   A0A2H1X0I9   A0A0K8UIB9   A0A1I8P1U8   A0A1I8P1R5   A0A1L8E785   W8B9U3   A0A1L8E7E8   A0A1L8E7J3   A0A0A1XE60   W8B5D0   A0A1I8MVX6   A0A1L8EFQ6   A0A1I8MVY3   A0A1L8EFY3   T1PCW5   A0A1L8EFU2   A0A212EZN8   A0A194PJI3   B0WKE4   A0A2A4JLT5   A0A0A1XC67   A0A1A9X005   A0A212EYD8   U5ETH9   A0A1I8MZK1   A0A182GKA8   A0A2A4K5Q7   A0A2H1WYY1   A0A182GYQ4   A0A2W1BLZ7   A0A0L0BUM3   A0A2A4JLI7   A0A1A9WGN7  

Pubmed

19121390    28756777    26354079    22118469    26227816    23622113    + More
25348373    24495485    25830018    25315136    26483478    26108605   

EMBL

BABH01032458    KZ149911    PZC78141.1    ODYU01000151    SOQ34432.1    KQ459579    + More
KPI99511.1    AGBW02011638    OWR46364.1    ODYU01008516    SOQ52184.1    NWSH01001089    PCG72681.1    JTDY01010294    KOB58258.1    KPI99493.1    BABH01032396    BABH01032397    BABH01032398    BABH01032399    KQ460542    KPJ14129.1    NWSH01002380    PCG68430.1    KPI99535.1    KPI99507.1    NWSH01005206    PCG64352.1    KPI99506.1    ODYU01009141    SOQ53353.1    KZ149979    PZC75843.1    JTDY01003063    KOB70227.1    AGBW02008612    OWR52914.1    SOQ34435.1    AGBW02010212    OWR48924.1    ODYU01004504    SOQ44451.1    PCG68429.1    KPJ14144.1    KZ150202    PZC72277.1    BABH01037389    ODYU01006861    SOQ49086.1    GAIX01000623    JAA91937.1    KPJ14146.1    NWSH01000659    PCG74966.1    ODYU01011202    SOQ56787.1    PZC78136.1    ODYU01001846    SOQ38614.1    JTDY01001109    KOB74851.1    ODYU01004537    SOQ44529.1    ODYU01011059    SOQ56557.1    SOQ44452.1    KPJ14131.1    PZC78134.1    BABH01032453    SOQ52183.1    NWSH01000457    PCG76268.1    KPI99491.1    AGBW02013272    OWR43679.1    KPJ14127.1    BABH01032418    BABH01032419    BABH01032420    BABH01032421    BABH01032422    BABH01032423    SOQ49085.1    GFDL01005969    JAV29076.1    GFDL01005870    JAV29175.1    DS231834    EDS32608.1    PCG72687.1    PCG72686.1    GFDL01006432    JAV28613.1    GFDL01006485    JAV28560.1    GAKP01013340    JAC45612.1    CAQQ02083380    CAQQ02083381    GAKP01013342    JAC45610.1    ODYU01012422    SOQ58716.1    GDHF01025885    JAI26429.1    GFDG01004236    JAV14563.1    GAMC01012742    JAB93813.1    GFDG01004235    JAV14564.1    GFDG01004234    JAV14565.1    GBXI01005544    JAD08748.1    GAMC01012743    JAB93812.1    GFDG01001242    JAV17557.1    GFDG01001245    JAV17554.1    KA646499    AFP61128.1    GFDG01001241    JAV17558.1    AGBW02011241    OWR46942.1    KQ459603    KPI92884.1    DS231971    EDS29763.1    PCG72678.1    GBXI01006239    JAD08053.1    AGBW02011531    OWR46513.1    GANO01004365    JAB55506.1    JXUM01069579    KQ562558    KXJ75630.1    NWSH01000098    PCG79585.1    ODYU01012071    SOQ58176.1    JXUM01021492    KQ560602    KXJ81676.1    KZ149975    PZC75948.1    JRES01001303    KNC23770.1    PCG72679.1   

Proteomes

UP000005204    UP000053268    UP000007151    UP000218220    UP000037510    UP000053240    + More
UP000095300    UP000002320    UP000015102    UP000095301    UP000091820    UP000069940    UP000249989    UP000037069   

PRIDE

H9JVL1    H9JVM2    H9JV72    H9JVL3    H9JVR6   

Pfam

PF00083   Sugar_tr        + More
PF07690   MFS_1

Interpro

IPR005828   MFS_sugar_transport-like        + More
IPR036259   MFS_trans_sf       
IPR011701   MFS       
IPR020846   MFS_dom       

SUPFAM

SSF103473   SSF103473       

CDD

cd06174  MFS

ProteinModelPortal

H9JVL1   A0A2W1BUU8   A0A2H1V250   A0A194Q1T6   A0A212EY43   A0A2H1WI98   + More
A0A2A4JL38   A0A0L7K4N0   A0A194Q2D2   H9JVM2   A0A0N1IG89   A0A2A4JAH3   A0A194Q800   A0A194Q1Q2   A0A2A4IYX6   A0A194Q1T1   A0A2H1WJU4   A0A2W1BVQ5   A0A0L7L435   A0A212FGQ8   A0A2H1V0R1   A0A212F5C2   A0A2H1VUC9   A0A2A4J999   A0A0N0PCK2   A0A2W1BGE8   H9JV72   A0A2H1W801   S4Q006   A0A0N1I9N3   A0A2A4JT62   A0A2H1WUV1   A0A2W1BZI9   A0A2H1VEB4   A0A0L7LHZ8   A0A2H1VUK7   A0A2H1WU82   A0A2H1VVE4   A0A0N0PCN2   A0A2W1BWY0   H9JVL3   A0A2H1WGI5   A0A2A4JX40   A0A194Q1R5   A0A212EQC0   A0A0N1IPG1   H9JVR6   A0A2H1W7K7   A0A1Q3FNL7   A0A1Q3FNK2   A0A1I8P9Y1   B0W415   A0A2A4JKW1   A0A2A4JLN1   A0A1Q3FM89   A0A1Q3FLR3   A0A034VU45   T1GER7   A0A034VUT9   A0A2H1X0I9   A0A0K8UIB9   A0A1I8P1U8   A0A1I8P1R5   A0A1L8E785   W8B9U3   A0A1L8E7E8   A0A1L8E7J3   A0A0A1XE60   W8B5D0   A0A1I8MVX6   A0A1L8EFQ6   A0A1I8MVY3   A0A1L8EFY3   T1PCW5   A0A1L8EFU2   A0A212EZN8   A0A194PJI3   B0WKE4   A0A2A4JLT5   A0A0A1XC67   A0A1A9X005   A0A212EYD8   U5ETH9   A0A1I8MZK1   A0A182GKA8   A0A2A4K5Q7   A0A2H1WYY1   A0A182GYQ4   A0A2W1BLZ7   A0A0L0BUM3   A0A2A4JLI7   A0A1A9WGN7  

KEGG

101740862    no KO assigned | (RefSeq) synaptic vesicle glycoprotein 2B-like

GO

GO:0022857   GO:0016021   GO:0055085   GO:0016020   GO:0005886   GO:0007155   GO:0005515   GO:0045211   GO:0006281   GO:0048384  

Length:

351

Number of predicted TMHs:

8

Exp number of AAs in TMHs:

163.17686

Exp number, first 60 AAs:

36.19623

Total prob of N-in:

0.83800

POSSIBLE N-term signal

sequence

inside

1  -  1

TMhelix

2  -  21

outside

22  -  40

TMhelix

41  -  63

inside

64  -  137

TMhelix

138  -  160

outside

161  -  204

TMhelix

205  -  227

inside

228  -  233

TMhelix

234  -  253

outside

254  -  257

TMhelix

258  -  280

inside

281  -  292

TMhelix

293  -  315

outside

316  -  319

TMhelix

320  -  339

inside

340  -  351

 

 

Pi

189.06301

Theta

175.884641

Tajima's D

0.736551

CLR

1.539269

CSRT

0.585320733963302

Interpretation

Uncertain