Gene

KWMTBOMO03203

Pre Gene Modal

BGIBMGA013642

Annotation

PREDICTED:_synaptic_vesicle_glycoprotein_2A-like_[Amyelois_transitella]

Location

Bomo_Chr6(-):1449070-1470132      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.963

CDS

ATGAAAACCGAAGACGAAAGAACAATTTCGGATGTAGAAAAAAGCTCGGAGAAGGTAAACGAACTGTCGTTCGAGGAAGCTTTCGAGTTAACTGGCCATGGCAGATTCAATCATCTGGTCCTCTTCACGAGCGGTCTGATCATGCTGAACGTCTCCATGGAGTCGGTCGGCATGAGCTACGCTATCACCTCAGCTGAGTGTGAGCTTGGATTGAACAGCATGCATAAGGGCTTGATTAATGCCGCTGCTTTTATTGGTATAATCGCGACGTCGTTCCTGTGGGGCTATCTGGGCGACAGATTGGGTCGCAGAGCCGTCATGTTGCCAGCGACAGTCGGTTCAGCCTTGTTGTCGGTGGCTTCATCGTTTTCCAGCAATTTCTGGATGCTGATGCTACTGAGAGTACTCACTGGATGTCTCATATCAGCATCCAGTGCAACGGTGTATGCTTACCTCGGCGAGATGCACACGAGCTCCAGGAGAGCCGCAGCCATCGCCTGGGGATCAGCATTCATATCGTTCTCATTCATGATACTACCAGGTCTAGCCTGGCTGATAATTCCCGGAAAATGGACGTTCTCCTTGGTCTTCATGGATATAGTGCCGTGGCGAGCGTTCGTCTGGTGTTGGTGCGCGCCAGGTCTAGCGGCTGCCTTGATCCTGCTGTTCCTACCCGAAAGCCCAAAATTTCTGCTGGCCAACAAGGGCCCGGAAGCGGCATTACCGGTTTTGGCTACTATGTACGAGTGGAACTATGGATCTGGATTAAAATATCCGGTGGGAAGGATATCGACGTCAAATTTAGATGCCCAAAGAGTTGGAGGATTCGTCGGAGCTGTGAAGGACATTGCCCTAATGTTCAAGCCACCCCTCCTTAGATGTGTTTTCATCTCACATACATCTATGTTTGCCGTTTTTATGGTATCGAGTGGTCTGTACGTGTGGGTACCGGATATCCTCAACAGTATTCTGCGCGACTCGACCGATCAGAACATAACCATATGCCAGATTATATCGGATAAATTCCAAAATGCAACCACGGACCCAATGGGATCGAGCTGCCGCGCTGACGTGTCTGTCTCCGTGTTCCCGATCTCGATGGCCATGGGCGCCGTGTTCGCGGTCACGTACCTCGCCATCGGCTTCTTCATCAACAAGATCGGAAGAAAGACCCTTTACTGTGGAATAATGTTCGTCTGTGGTGTTGCCACGGTGGGAGCAGCGTTCGTGCCCCACGGTGGGGCTGCCACCGCCCTGCTCATAGTCTCGCTGTGCTCAGGATGTGCGGCCTCGATATTAGCTGCCATTGTTGTCGACGTGTTCCCCACCTGCTTAAGGGCCATGGCGATGTGCGTGATGTACATGGTGGGACGTGGAGGCGCTGCAGTGGGCTCCAACTTCCTCGGAGCCACCCTGGACACGCACTGTCAAACAGCCTTCACGGTTTTCGGAGTTTTTACCGCGGGCTCCACAATTTTAATGGTGTTTTGGCCAAAACCGGAGAAAGTACGAGAAGAAATGGAACAAAAAGGTCTCTCGTATTAA

Protein

MKTEDERTISDVEKSSEKVNELSFEEAFELTGHGRFNHLVLFTSGLIMLNVSMESVGMSYAITSAECELGLNSMHKGLINAAAFIGIIATSFLWGYLGDRLGRRAVMLPATVGSALLSVASSFSSNFWMLMLLRVLTGCLISASSATVYAYLGEMHTSSRRAAAIAWGSAFISFSFMILPGLAWLIIPGKWTFSLVFMDIVPWRAFVWCWCAPGLAAALILLFLPESPKFLLANKGPEAALPVLATMYEWNYGSGLKYPVGRISTSNLDAQRVGGFVGAVKDIALMFKPPLLRCVFISHTSMFAVFMVSSGLYVWVPDILNSILRDSTDQNITICQIISDKFQNATTDPMGSSCRADVSVSVFPISMAMGAVFAVTYLAIGFFINKIGRKTLYCGIMFVCGVATVGAAFVPHGGAATALLIVSLCSGCAASILAAIVVDVFPTCLRAMAMCVMYMVGRGGAAVGSNFLGATLDTHCQTAFTVFGVFTAGSTILMVFWPKPEKVREEMEQKGLSY

Uniprot

H9JVS9   A0A2H1WF49   A0A2W1BST8   A0A2A4J8X0   A0A194Q1Q7   A0A0N1I7T7   + More
D3TPI2   U5EEU7   A0A182I9L3   A0A182VCT6   A0A182X5C4   Q16HW1   Q7QE78   A0A1A9YHE0   A0A1S4G0A5   A0A182XY48   A0A182RJ30   A0A182MA18   Q6U1H2   A0A182NC28   A0A182Q0R4   U5ETH9   A0A0A1XE46   A0A182PM75   A0A1B0GJR0   A0A1A9UY18   A0A0K8TVF7   A0A034W0A7   A0A182YEX8   W8BVQ3   A0A0A1WGJ9   W8C469   A0A0A1XKB5   A0A034VFR0   A0A182V7Y7   Q7QEB5   W8AWB7   A0A182I9F6   A0A0A1X5Q6   A0A182WUB9   A0A1A9UY17   A0A084VN22   A0A1L8EFY3   A0A1L8EFU2   A0A1L8EFQ6   W8AY09   A0A0K8UH50   A0A182TH39   A0A034VLH4   A0A1A9X005   A0A1B0AHB7   T1PCW5   A0A1B0AMN9   A0A1I8MVX6   A0A1I8P1U8   A0A182N1C6   A0A1I8P1R5   A0A182W337   A0A1I8MVY3   A0A1L8DEG9   A0A182P4D5   A0A1Y9G9B8   A0A182R8G8   A0A182KBN0   A0A182INB7   Q7QA97   A0A1I8PH06   A0A182HVJ0   A0A182YJP5   A0A0K8U925   A0A182P3F5   T1P8E1   B0X674   A0A1A9YHD8   A0A1B0AMN2   A0A1Y9G865   A0A2M4BKA1   A0A182W4A7   A0A1B0AHB5   W5J8T8   A0A182NCP9   A0A182XF22   A0A2M4BK86   A0A212EZN8   A0A1B0CB10   A0A2M4BKB0   A0A182MDT7   B0WKE4   A0A1J1HHH6   A0A2M4BKM4   A0A023EUT1   A0A1Y9HAI4   A0A1I8MZK1   A0A1B0FNM5   A0A182LIK3   H9JVR6   A0A182TBQ9  

Pubmed

19121390    28756777    26354079    20353571    17510324    12364791    + More
14747013    17210077    25244985    15157223    25830018    25348373    24495485    24438588    25315136    20920257    23761445    22118469    24945155    20966253   

EMBL

BABH01032460    BABH01032461    BABH01032462    ODYU01008265    SOQ51699.1    KZ149911    + More
PZC78142.1    NWSH01002616    PCG67843.1    KQ459579    KPI99512.1    KQ460542    KPJ14150.1    EZ423334    ADD19610.1    GANO01004158    JAB55713.1    APCN01000999    APCN01001000    CH478136    EAT33842.1    AAAB01008847    EAA06813.5    AXCM01000255    AY380837    AAQ88394.1    AXCN02001428    GANO01004365    JAB55506.1    GBXI01004603    JAD09689.1    AJWK01022122    AJWK01022123    GDHF01034056    GDHF01028880    GDHF01023028    GDHF01020845    GDHF01015160    JAI18258.1    JAI23434.1    JAI29286.1    JAI31469.1    JAI37154.1    GAKP01010823    JAC48129.1    GAMC01013311    JAB93244.1    GBXI01016143    JAC98148.1    GAMC01009766    JAB96789.1    GBXI01002836    JAD11456.1    GAKP01018554    JAC40398.1    EAA06847.4    GAMC01013310    JAB93245.1    APCN01000977    GBXI01008289    JAD06003.1    ATLV01014674    KE524978    KFB39366.1    GFDG01001245    JAV17554.1    GFDG01001241    JAV17558.1    GFDG01001242    JAV17557.1    GAMC01012655    JAB93900.1    GDHF01026325    JAI25989.1    GAKP01015980    JAC42972.1    KA646499    AFP61128.1    JXJN01000506    GFDF01009225    JAV04859.1    AAAB01008898    EAA09107.5    APCN01005783    GDHF01029221    JAI23093.1    KA644899    AFP59528.1    DS232404    EDS41224.1    GGFJ01004344    MBW53485.1    ADMH02001852    ETN60872.1    GGFJ01004345    MBW53486.1    AGBW02011241    OWR46942.1    AJWK01004723    GGFJ01004346    MBW53487.1    AXCM01000113    AXCM01000114    DS231971    EDS29763.1    CVRI01000004    CRK87479.1    GGFJ01004431    MBW53572.1    GAPW01000867    JAC12731.1    AXCN02001180    CCAG010023315    BABH01032418    BABH01032419    BABH01032420    BABH01032421    BABH01032422    BABH01032423   

Proteomes

UP000005204    UP000218220    UP000053268    UP000053240    UP000075840    UP000075903    + More
UP000076407    UP000008820    UP000007062    UP000092443    UP000076408    UP000075900    UP000075883    UP000075884    UP000075886    UP000075885    UP000092461    UP000078200    UP000030765    UP000075902    UP000091820    UP000092445    UP000092460    UP000095301    UP000095300    UP000075920    UP000069272    UP000075881    UP000075880    UP000002320    UP000000673    UP000007151    UP000183832    UP000092444    UP000075882    UP000075901   

PRIDE

H9JVS9    H9JVR6   

Pfam

PF07690   MFS_1        + More
PF00732   GMC_oxred_N
PF00083   Sugar_tr

Interpro

IPR020846   MFS_dom        + More
IPR036259   MFS_trans_sf       
IPR011701   MFS       
IPR036188   FAD/NAD-bd_sf       
IPR000172   GMC_OxRdtase_N       
IPR005828   MFS_sugar_transport-like       

SUPFAM

SSF103473   SSF103473        + More
SSF51905   SSF51905       

Gene 3D

3.50.50.60    

CDD

cd06174  MFS

ProteinModelPortal

H9JVS9   A0A2H1WF49   A0A2W1BST8   A0A2A4J8X0   A0A194Q1Q7   A0A0N1I7T7   + More
D3TPI2   U5EEU7   A0A182I9L3   A0A182VCT6   A0A182X5C4   Q16HW1   Q7QE78   A0A1A9YHE0   A0A1S4G0A5   A0A182XY48   A0A182RJ30   A0A182MA18   Q6U1H2   A0A182NC28   A0A182Q0R4   U5ETH9   A0A0A1XE46   A0A182PM75   A0A1B0GJR0   A0A1A9UY18   A0A0K8TVF7   A0A034W0A7   A0A182YEX8   W8BVQ3   A0A0A1WGJ9   W8C469   A0A0A1XKB5   A0A034VFR0   A0A182V7Y7   Q7QEB5   W8AWB7   A0A182I9F6   A0A0A1X5Q6   A0A182WUB9   A0A1A9UY17   A0A084VN22   A0A1L8EFY3   A0A1L8EFU2   A0A1L8EFQ6   W8AY09   A0A0K8UH50   A0A182TH39   A0A034VLH4   A0A1A9X005   A0A1B0AHB7   T1PCW5   A0A1B0AMN9   A0A1I8MVX6   A0A1I8P1U8   A0A182N1C6   A0A1I8P1R5   A0A182W337   A0A1I8MVY3   A0A1L8DEG9   A0A182P4D5   A0A1Y9G9B8   A0A182R8G8   A0A182KBN0   A0A182INB7   Q7QA97   A0A1I8PH06   A0A182HVJ0   A0A182YJP5   A0A0K8U925   A0A182P3F5   T1P8E1   B0X674   A0A1A9YHD8   A0A1B0AMN2   A0A1Y9G865   A0A2M4BKA1   A0A182W4A7   A0A1B0AHB5   W5J8T8   A0A182NCP9   A0A182XF22   A0A2M4BK86   A0A212EZN8   A0A1B0CB10   A0A2M4BKB0   A0A182MDT7   B0WKE4   A0A1J1HHH6   A0A2M4BKM4   A0A023EUT1   A0A1Y9HAI4   A0A1I8MZK1   A0A1B0FNM5   A0A182LIK3   H9JVR6   A0A182TBQ9  

PDB

4LDS     E-value=5.35817e-11,     Score=164

KEGG

101741001    no KO assigned | (RefSeq) synaptic vesicle glycoprotein 2C-like

GO

GO:0016021   GO:0055085   GO:0016614   GO:0050660   GO:0022857   GO:0007156   GO:0016020   GO:0005886   GO:0007155   GO:0005515   GO:0045211   GO:0006281   GO:0048384  

Length:

514

Number of predicted TMHs:

12

Exp number of AAs in TMHs:

256.83391

Exp number, first 60 AAs:

18.98705

Total prob of N-in:

0.94960

POSSIBLE N-term signal

sequence

inside

1  -  39

TMhelix

40  -  62

outside

63  -  76

TMhelix

77  -  98

inside

99  -  104

TMhelix

105  -  127

outside

128  -  130

TMhelix

131  -  153

inside

154  -  164

TMhelix

165  -  187

outside

188  -  201

TMhelix

202  -  224

inside

225  -  294

TMhelix

295  -  317

outside

318  -  361

TMhelix

362  -  384

inside

385  -  390

TMhelix

391  -  410

outside

411  -  414

TMhelix

415  -  437

inside

438  -  443

TMhelix

444  -  463

outside

464  -  477

TMhelix

478  -  497

inside

498  -  514

 

 

Pi

192.599142

Theta

149.747168

Tajima's D

1.182375

CLR

0.200501

CSRT

0.709214539273036

Interpretation

Uncertain