Silkworm Genome Informatics Database

Gene

KWMTBOMO03201

Annotation

hypothetical_protein_KGM_02594_[Danaus_plexippus]

Location

Bomo_Chr6(-):1347630-1348622 View in EpiBrowser

Location in the cell

PlasmaMembrane Reliability : 3.778

CDS

ATGGACCTGACCCACCGTTCTACAGTCAGGTCGCGATGCACCGGAGTCAACAGCATGTGGTACATAGTCGCTTTGGTGATGCCCCTGTTCAGTGTACACAACTGTGTCATGACCCTTAGATGCACTCCAAGCACTGTCATGAACACTGCTGAAATAATCCTTCATCATGTGAACAAGCTCTGTACTAAGGCGCGAGCCAATCTCAGAAGATTAGTTCAAGATCAGATTGCGAGAGATTTCTTCGCAACTGCAATGGATATTGTACTAGTCATTTACGCTTTGGGATTTTTAATTCTTTCCCTGTATCAAGCTTCTGTGTTTGGATGA

Protein

MDLTHRSTVRSRCTGVNSMWYIVALVMPLFSVHNCVMTLRCTPSTVMNTAEIILHHVNKLCTKARANLRRLVQDQIARDFFATAMDIVLVIYALGFLILSLYQASVFG

Uniprot

A0A2A4IW35 A0A2H1VNQ3 A0A2H1VNQ8 A0A2W1B544 A0A212EXX9 A0A194Q3C7 + More

Pubmed

28756777 22118469 26354079

EMBL

NWSH01006368 PCG63484.1 ODYU01003549 SOQ42461.1 ODYU01003548 SOQ42460.1 + More
KZ150409 PZC70988.1 AGBW02011640 OWR46352.1 KQ459579 KPI99514.1

Proteomes

UP000218220 UP000007151 UP000053268

ProteinModelPortal

A0A2A4IW35 A0A2H1VNQ3 A0A2H1VNQ8 A0A2W1B544 A0A212EXX9 A0A194Q3C7 + More

KEGG

101741148 no KO assigned | (RefSeq) uncharacterized LOC101741148

GO

GO:0016021

Length:

108

Number of predicted TMHs:

2

Exp number of AAs in TMHs:

41.9916

Exp number, first 60 AAs:

19.93991

Total prob of N-in:

0.54516

POSSIBLE N-term signal

sequence

outside

1 - 14

TMhelix

15 - 37

inside

38 - 79

TMhelix

80 - 102

outside

103 - 108

Pi

282.01721

Theta

197.787756

Tajima's D

1.340399

CLR

0.124882

CSRT

0.747912604369781

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics