SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO03200  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA013644
Annotation
PREDICTED:_uncharacterized_protein_LOC106141071_[Amyelois_transitella]
Location in the cell
Nuclear   Reliability : 3.808
 

Sequence

CDS
ATGTCAGCGAAGGCGGATGCTCTACTGCTCTTCACTGAATACACGGCTATAGCTGGCGAAGAACTGAAGTCTTTCCTGATGAATGTCACAGCCTACTCCGATGATGCCATACGGAACGCTGACAATGTTATTACCTCTGATTATAACTCCAATTGTCGATCGAAATTCGATTCCCGCATTCGCACGATCCAGAATGACGCCCGCCGCGCGGCCAGCTTCAGCGGCGAGAACCATCACAAGTTCCTACTCGGCCACATGATCGTGATGAGAATGCATTTGAATAAGAGTGAATCCCTGGTGAAGAAGTGCACCAAAGCGGTGAGAGATTGCGGCATCTCTTGCGAGACAATACCTCGAGTGAAGCGCTGGAGACGCCAAGCTCTGGAGGAGATCCACCGCGTCCGGGAGGACATGCAGCACTCCCGCCGCTCCTACAAGGACCTAGTGCTTCATGCAAGAAGAAAACTCAACCACCTTCACAAACAAGTCATAAAGAGGTCCAACGATGCTGTAGACAAGTACCACGAGTGTTTGAGACGTTGA
Protein
MSAKADALLLFTEYTAIAGEELKSFLMNVTAYSDDAIRNADNVITSDYNSNCRSKFDSRIRTIQNDARRAASFSGENHHKFLLGHMIVMRMHLNKSESLVKKCTKAVRDCGISCETIPRVKRWRRQALEEIHRVREDMQHSRRSYKDLVLHARRKLNHLHKQVIKRSNDAVDKYHECLRR

Summary

Ontologies

GO

Topology

Length:
180
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.01411
Exp number, first 60 AAs:
0.01357
Total prob of N-in:
0.05597
outside
1  -  180
 
 

Population Genetic Test Statistics

Pi
213.861363
Theta
167.546003
Tajima's D
0.544358
CLR
1.161566
CSRT
0.525273736313184
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
26822097 AHCPAPIGIAIR 100.00 3e-04
28467696 NADMSEEMQQDAVDCATQAIEK 100.00 3e-04
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